RNA–Protein interactions for RNA: ENST00000372431.7

PLTP-203, Transcript of phospholipid transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLTP, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLTP-203ENST00000372431 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
PLTP-203ENST00000372431 CCDC180Q9P1Z9 1646 aa29.26■■■□□ 2.27
PLTP-203ENST00000372431 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
PLTP-203ENST00000372431 ABCC9O60706 1549 aa27.8■■■□□ 2.04
PLTP-203ENST00000372431 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
PLTP-203ENST00000372431 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.01
PLTP-203ENST00000372431 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
PLTP-203ENST00000372431 NACADO15069 1562 aa27.28■■□□□ 1.96
PLTP-203ENST00000372431 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
PLTP-203ENST00000372431 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
PLTP-203ENST00000372431 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
PLTP-203ENST00000372431 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
PLTP-203ENST00000372431 BICRAQ9NZM4 1560 aa26.22■■□□□ 1.79
PLTP-203ENST00000372431 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
PLTP-203ENST00000372431 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.76
PLTP-203ENST00000372431 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
PLTP-203ENST00000372431 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
PLTP-203ENST00000372431 BAZ1AQ9NRL2 1556 aaPredicted RBP25.85■■□□□ 1.73
PLTP-203ENST00000372431 MROH2BQ7Z745 1585 aa25.8■■□□□ 1.72
PLTP-203ENST00000372431 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
PLTP-203ENST00000372431 WIZO95785 1651 aa25.6■■□□□ 1.69
PLTP-203ENST00000372431 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
PLTP-203ENST00000372431 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
PLTP-203ENST00000372431 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
PLTP-203ENST00000372431 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
PLTP-203ENST00000372431 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
PLTP-203ENST00000372431 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
PLTP-203ENST00000372431 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
PLTP-203ENST00000372431 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
PLTP-203ENST00000372431 HMGXB3Q12766 1538 aa25.13■■□□□ 1.61
PLTP-203ENST00000372431 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
PLTP-203ENST00000372431 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
PLTP-203ENST00000372431 DNAJC5BQ9UF47 199 aa24.58■■□□□ 1.52
PLTP-203ENST00000372431 CFTRP13569 1480 aa24.55■■□□□ 1.52
PLTP-203ENST00000372431 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
PLTP-203ENST00000372431 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
PLTP-203ENST00000372431 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
PLTP-203ENST00000372431 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
PLTP-203ENST00000372431 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
PLTP-203ENST00000372431 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
PLTP-203ENST00000372431 NESP48681 1621 aa24.33■■□□□ 1.49
PLTP-203ENST00000372431 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
PLTP-203ENST00000372431 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
PLTP-203ENST00000372431 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
PLTP-203ENST00000372431 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
PLTP-203ENST00000372431 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
PLTP-203ENST00000372431 CUX1P39880 1505 aa24.15■■□□□ 1.46
PLTP-203ENST00000372431 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.45
PLTP-203ENST00000372431 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
PLTP-203ENST00000372431 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
PLTP-203ENST00000372431 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
PLTP-203ENST00000372431 SOGA1O94964 1423 aa23.99■■□□□ 1.43
PLTP-203ENST00000372431 EEA1Q15075 1411 aa23.96■■□□□ 1.43
PLTP-203ENST00000372431 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
PLTP-203ENST00000372431 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
PLTP-203ENST00000372431 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
PLTP-203ENST00000372431 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
PLTP-203ENST00000372431 RUSC2Q8N2Y8 1516 aa23.88■■□□□ 1.41
PLTP-203ENST00000372431 MRC2Q9UBG0 1479 aa23.88■■□□□ 1.41
PLTP-203ENST00000372431 LOC105371045A0A1W2PR82 267 aa23.87■■□□□ 1.41
PLTP-203ENST00000372431 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
PLTP-203ENST00000372431 CSRNP3Q8WYN3 585 aa23.82■■□□□ 1.4
PLTP-203ENST00000372431 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
PLTP-203ENST00000372431 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
PLTP-203ENST00000372431 CUX2O14529 1486 aa23.75■■□□□ 1.39
PLTP-203ENST00000372431 RAD54L2Q9Y4B4 1467 aa23.74■■□□□ 1.39
PLTP-203ENST00000372431 WDR62O43379 1518 aa23.74■■□□□ 1.39
PLTP-203ENST00000372431 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
PLTP-203ENST00000372431 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
PLTP-203ENST00000372431 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
PLTP-203ENST00000372431 KIF21BO75037 1637 aa23.64■■□□□ 1.38
PLTP-203ENST00000372431 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
PLTP-203ENST00000372431 TARBP1Q13395 1621 aaKnown RBP23.6■■□□□ 1.37
PLTP-203ENST00000372431 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
PLTP-203ENST00000372431 UBTFP17480 764 aaKnown RBP23.55■■□□□ 1.36
PLTP-203ENST00000372431 IGF1RP08069 1367 aa23.54■■□□□ 1.36
PLTP-203ENST00000372431 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
PLTP-203ENST00000372431 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
PLTP-203ENST00000372431 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
PLTP-203ENST00000372431 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
PLTP-203ENST00000372431 RAPGEF2Q9Y4G8 1499 aa23.52■■□□□ 1.36
PLTP-203ENST00000372431 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
PLTP-203ENST00000372431 TNIKQ9UKE5 1360 aa23.49■■□□□ 1.35
PLTP-203ENST00000372431 CARMIL1Q5VZK9 1371 aa23.46■■□□□ 1.35
PLTP-203ENST00000372431 CUL7Q14999 1698 aa23.44■■□□□ 1.34
PLTP-203ENST00000372431 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
PLTP-203ENST00000372431 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.348e-7■■■■■ 28.7
PLTP-203ENST00000372431 HRCP23327 699 aa23.4■■□□□ 1.34
PLTP-203ENST00000372431 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.33
PLTP-203ENST00000372431 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
PLTP-203ENST00000372431 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
PLTP-203ENST00000372431 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
PLTP-203ENST00000372431 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
PLTP-203ENST00000372431 ADAMTS12P58397 1594 aa23.25■■□□□ 1.31
PLTP-203ENST00000372431 CLIP1P30622 1438 aa23.23■■□□□ 1.31
PLTP-203ENST00000372431 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
PLTP-203ENST00000372431 RANGAP1P46060 587 aaPredicted RBP23.21■■□□□ 1.31
PLTP-203ENST00000372431 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
PLTP-203ENST00000372431 CTTNBP2Q8WZ74 1663 aa23.16■■□□□ 1.3
PLTP-203ENST00000372431 SYNJ2O15056 1496 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms