Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 TUBA1B-208ENST00000552984 574 ntTSL 418.02■□□□□ 0.476e-10■■□□□ 13.6
DROSHAQ9NRR4 TUBA1B-206ENST00000550367 835 ntTSL 315.58■□□□□ 0.086e-10■■□□□ 13.6
DROSHAQ9NRR4 TUBA1B-207ENST00000551324 840 ntTSL 215.58■□□□□ 0.086e-10■■□□□ 13.6
DROSHAQ9NRR4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.148e-7■■□□□ 13.6
DROSHAQ9NRR4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.98e-7■■□□□ 13.6
DROSHAQ9NRR4 FBL-206ENST00000597224 732 ntTSL 312.99□□□□□ -0.332e-8■■□□□ 13.6
DROSHAQ9NRR4 ATP6V0B-210ENST00000498208 419 ntTSL 536.5■■■■□ 3.436e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-219ENST00000453297 1819 ntTSL 536.94■■■■□ 3.51e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-201ENST00000261963 2419 ntTSL 1 (best)32.79■■■□□ 2.841e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-232ENST00000561425 582 ntTSL 531.84■■■□□ 2.691e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-212ENST00000420013 566 ntTSL 431.76■■■□□ 2.671e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-230ENST00000491028 573 ntTSL 428.51■■■□□ 2.161e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.91■■□□□ 1.741e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-221ENST00000469415 3027 ntTSL 1 (best)25.19■■□□□ 1.621e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC25.18■■□□□ 1.621e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC24.77■■□□□ 1.561e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-211ENST00000558314 1031 ntTSL 1 (best)24.21■■□□□ 1.471e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-217ENST00000441756 370 ntTSL 324.19■■□□□ 1.461e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-211ENST00000413354 952 ntTSL 524.1■■□□□ 1.451e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.411e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.311e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-228ENST00000560975 2855 ntTSL 522.5■■□□□ 1.191e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.87■■□□□ 1.091e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.63■■□□□ 1.051e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.911e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-205ENST00000397017 3903 ntTSL 520.57■□□□□ 0.881e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-227ENST00000560970 1039 ntTSL 1 (best)16.96■□□□□ 0.311e-7■■□□□ 13.6
DROSHAQ9NRR4 MCF2L-216ENST00000439475 453 ntTSL 515.96■□□□□ 0.151e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-212ENST00000558347 1525 ntTSL 515.64■□□□□ 0.091e-7■■□□□ 13.6
DROSHAQ9NRR4 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC12.2□□□□□ -0.461e-7■■□□□ 13.6
DROSHAQ9NRR4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.731e-9■■□□□ 13.6
DROSHAQ9NRR4 PPP2CB-207ENST00000520500 603 ntTSL 49.7□□□□□ -0.861e-9■■□□□ 13.6
DROSHAQ9NRR4 PPP2CB-202ENST00000518243 577 ntTSL 36.71□□□□□ -1.331e-9■■□□□ 13.6
DROSHAQ9NRR4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC20.85■□□□□ 0.932e-6■■□□□ 13.6
DROSHAQ9NRR4 MED15-226ENST00000478831 707 ntTSL 417.63■□□□□ 0.412e-6■■□□□ 13.6
DROSHAQ9NRR4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC42.31■■■■■ 4.362e-6■■□□□ 13.6
DROSHAQ9NRR4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC27.89■■■□□ 2.052e-6■■□□□ 13.6
DROSHAQ9NRR4 SSBP3-210ENST00000525990 701 ntTSL 218.77■□□□□ 0.62e-6■■□□□ 13.6
DROSHAQ9NRR4 ZNF706-215ENST00000523922 493 ntTSL 335.7■■■■□ 3.312e-7■■□□□ 13.6
DROSHAQ9NRR4 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.512e-7■■□□□ 13.6
DROSHAQ9NRR4 ZNF706-208ENST00000519916 597 ntTSL 215.31■□□□□ 0.042e-7■■□□□ 13.6
DROSHAQ9NRR4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.772e-7■■□□□ 13.6
DROSHAQ9NRR4 ZNF706-214ENST00000523146 476 ntTSL 51.26□□□□□ -2.212e-7■■□□□ 13.6
DROSHAQ9NRR4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.954e-29■■□□□ 13.6
DROSHAQ9NRR4 ARVCF-205ENST00000462319 433 ntTSL 321.67■■□□□ 1.064e-9■■□□□ 13.6
DROSHAQ9NRR4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC38.92■■■■□ 3.822e-33■■□□□ 13.6
DROSHAQ9NRR4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.282e-33■■□□□ 13.6
DROSHAQ9NRR4 GADD45A-203ENST00000460575 874 ntTSL 234.97■■■■□ 3.192e-33■■□□□ 13.6
DROSHAQ9NRR4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC33.31■■■□□ 2.922e-33■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC21.7■■□□□ 1.061e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.031e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.891e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.731e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.6■□□□□ 0.731e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.731e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.641e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-206ENST00000504003 539 ntTSL 413.92□□□□□ -0.181e-8■■□□□ 13.6
DROSHAQ9NRR4 ARHGEF28-210ENST00000510312 8285 ntTSL 210.16□□□□□ -0.781e-8■■□□□ 13.6
DROSHAQ9NRR4 EDC4-204ENST00000572221 5267 ntTSL 224.83■■□□□ 1.571e-6■■□□□ 13.5
DROSHAQ9NRR4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.461e-6■■□□□ 13.5
DROSHAQ9NRR4 COLGALT1-204ENST00000597147 654 ntAPPRIS ALT2 TSL 521.57■■□□□ 1.043e-7■■□□□ 13.5
DROSHAQ9NRR4 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.193e-7■■□□□ 13.5
DROSHAQ9NRR4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC39.72■■■■□ 3.958e-8■■□□□ 13.5
DROSHAQ9NRR4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.918e-8■■□□□ 13.5
DROSHAQ9NRR4 SNRPB-203ENST00000474384 985 ntTSL 527.69■■■□□ 2.024e-8■■□□□ 13.5
DROSHAQ9NRR4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.554e-8■■□□□ 13.5
DROSHAQ9NRR4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.554e-8■■□□□ 13.5
DROSHAQ9NRR4 OTUD5-207ENST00000484499 924 ntTSL 514.55□□□□□ -0.086e-10■■□□□ 13.5
DROSHAQ9NRR4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.573e-6■■□□□ 13.5
DROSHAQ9NRR4 TNFRSF12A-203ENST00000571351 1678 ntTSL 231.19■■■□□ 2.583e-6■■□□□ 13.5
DROSHAQ9NRR4 TNFRSF12A-205ENST00000574699 583 ntTSL 229.66■■■□□ 2.343e-6■■□□□ 13.5
DROSHAQ9NRR4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC29.66■■■□□ 2.343e-6■■□□□ 13.5
DROSHAQ9NRR4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC23.57■■□□□ 1.363e-6■■□□□ 13.5
DROSHAQ9NRR4 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.48■□□□□ 0.873e-6■■□□□ 13.5
DROSHAQ9NRR4 BRD4-208ENST00000597315 892 ntTSL 541.11■■■■■ 4.171e-6■■□□□ 13.5
DROSHAQ9NRR4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC39.75■■■■□ 3.951e-6■■□□□ 13.5
DROSHAQ9NRR4 COX6C-202ENST00000517682 429 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.061e-7■■□□□ 13.5
DROSHAQ9NRR4 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.21e-7■■□□□ 13.5
DROSHAQ9NRR4 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.21e-7■■□□□ 13.5
DROSHAQ9NRR4 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.441e-7■■□□□ 13.5
DROSHAQ9NRR4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.831e-7■■□□□ 13.5
DROSHAQ9NRR4 COX6C-206ENST00000520517 566 ntTSL 47.98□□□□□ -1.131e-7■■□□□ 13.5
DROSHAQ9NRR4 COX6C-207ENST00000522934 562 ntTSL 46.97□□□□□ -1.291e-7■■□□□ 13.5
DROSHAQ9NRR4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.951e-9■■□□□ 13.5
DROSHAQ9NRR4 ORMDL3-203ENST00000579287 349 ntTSL 318.34■□□□□ 0.532e-10■■□□□ 13.5
DROSHAQ9NRR4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC35.32■■■■□ 3.247e-8■■□□□ 13.5
DROSHAQ9NRR4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC28.13■■■□□ 2.094e-6■■□□□ 13.5
DROSHAQ9NRR4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC24.55■■□□□ 1.524e-6■■□□□ 13.5
DROSHAQ9NRR4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.31■□□□□ 0.364e-6■■□□□ 13.5
DROSHAQ9NRR4 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC16.53■□□□□ 0.244e-6■■□□□ 13.5
DROSHAQ9NRR4 HAUS3-205ENST00000514395 580 ntTSL 435.21■■■■□ 3.233e-6■■□□□ 13.5
DROSHAQ9NRR4 POLN-213ENST00000515357 2183 ntTSL 232.25■■■□□ 2.753e-6■■□□□ 13.5
DROSHAQ9NRR4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.63e-6■■□□□ 13.5
DROSHAQ9NRR4 HAUS3-203ENST00000502440 574 ntTSL 429.72■■■□□ 2.353e-6■■□□□ 13.5
DROSHAQ9NRR4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.04■■□□□ 1.921e-6■■□□□ 13.5
DROSHAQ9NRR4 QKI-204ENST00000361758 6085 ntTSL 526.8■■□□□ 1.881e-6■■□□□ 13.5
DROSHAQ9NRR4 COLGALT1-203ENST00000597075 737 ntTSL 226.02■■□□□ 1.761e-7■■□□□ 13.5
DROSHAQ9NRR4 RAI1-204ENST00000489697 1570 ntTSL 324.3■■□□□ 1.481e-6■■□□□ 13.5
DROSHAQ9NRR4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC22.69■■□□□ 1.223e-6■■□□□ 13.5
DROSHAQ9NRR4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.56■■□□□ 1.041e-6■■□□□ 13.5
Retrieved 100 of 16,331 protein–RNA pairs in 157.8 ms