RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
EDC4-204ENST00000572221 NISCHQ9Y2I1 1504 aa34.41■■■■□ 3.1
EDC4-204ENST00000572221 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
EDC4-204ENST00000572221 SHROOM4Q9ULL8 1493 aa33.29■■■□□ 2.92
EDC4-204ENST00000572221 EHMT2Q96KQ7 1210 aa32.63■■■□□ 2.81
EDC4-204ENST00000572221 APLP2Q06481 763 aa32.59■■■□□ 2.81
EDC4-204ENST00000572221 PELP1Q8IZL8 1130 aaKnown RBP32.36■■■□□ 2.77
EDC4-204ENST00000572221 FAM9AQ8IZU1 332 aaPredicted RBP32.26■■■□□ 2.75
EDC4-204ENST00000572221 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
EDC4-204ENST00000572221 PCGF6Q9BYE7 350 aa31.57■■■□□ 2.64
EDC4-204ENST00000572221 TTBK1Q5TCY1 1321 aaPredicted RBP31.56■■■□□ 2.64
EDC4-204ENST00000572221 ZEB1P37275 1124 aaPredicted RBP31.44■■■□□ 2.62
EDC4-204ENST00000572221 RANGAP1P46060 587 aaPredicted RBP31.37■■■□□ 2.61
EDC4-204ENST00000572221 UBTFP17480 764 aaKnown RBP31.27■■■□□ 2.6
EDC4-204ENST00000572221 ATP1B4Q9UN42 357 aaPredicted RBP31.26■■■□□ 2.59
EDC4-204ENST00000572221 CCER1Q8TC90 406 aaPredicted RBP31.22■■■□□ 2.59
EDC4-204ENST00000572221 CENPBP07199 599 aaPredicted RBP31.2■■■□□ 2.59
EDC4-204ENST00000572221 ERICH6Q7L0X2 663 aa30.78■■■□□ 2.52
EDC4-204ENST00000572221 NEFLP07196 543 aa30.61■■■□□ 2.49
EDC4-204ENST00000572221 TRIM26Q12899 539 aaPredicted RBP30.47■■■□□ 2.47
EDC4-204ENST00000572221 PPARGC1BQ86YN6 1023 aaKnown RBP30.34■■■□□ 2.45
EDC4-204ENST00000572221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.26■■■□□ 2.44
EDC4-204ENST00000572221 HNRNPUL2Q1KMD3 747 aaKnown RBP30.26■■■□□ 2.44
EDC4-204ENST00000572221 YTHDC1Q96MU7 727 aaKnown RBP30.25■■■□□ 2.43
EDC4-204ENST00000572221 MYT1LQ9UL68 1186 aa30.17■■■□□ 2.42
EDC4-204ENST00000572221 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
EDC4-204ENST00000572221 ITGAEP38570 1179 aa30.11■■■□□ 2.41
EDC4-204ENST00000572221 LOC105371045A0A1W2PR82 267 aa29.96■■■□□ 2.39
EDC4-204ENST00000572221 HRCP23327 699 aa29.91■■■□□ 2.38
EDC4-204ENST00000572221 POLR3GLQ9BT43 218 aa29.87■■■□□ 2.37
EDC4-204ENST00000572221 MYT1Q01538 1121 aa29.79■■■□□ 2.36
EDC4-204ENST00000572221 DAXXQ9UER7 740 aaPredicted RBP29.68■■■□□ 2.34
EDC4-204ENST00000572221 ABCC9O60706 1549 aa29.66■■■□□ 2.34
EDC4-204ENST00000572221 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.329e-10■■□□□ 14.1
EDC4-204ENST00000572221 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
EDC4-204ENST00000572221 CNGB1Q14028 1251 aaPredicted RBP29.4■■■□□ 2.3
EDC4-204ENST00000572221 SLC4A1APQ9BWU0 796 aaKnown RBP29.38■■■□□ 2.29
EDC4-204ENST00000572221 TRIM52Q96A61 297 aa29.35■■■□□ 2.29
EDC4-204ENST00000572221 DIEXFQ68CQ4 756 aaKnown RBP29.28■■■□□ 2.28
EDC4-204ENST00000572221 NEUROD1Q13562 356 aa29.1■■■□□ 2.25
EDC4-204ENST00000572221 CLSPNQ9HAW4 1339 aa29.08■■■□□ 2.25
EDC4-204ENST00000572221 FBLN2P98095 1184 aa29.04■■■□□ 2.24
EDC4-204ENST00000572221 ZNF316A6NFI3 1004 aaPredicted RBP28.95■■■□□ 2.22
EDC4-204ENST00000572221 CSRNP3Q8WYN3 585 aa28.95■■■□□ 2.22
EDC4-204ENST00000572221 ANP32CO43423 234 aa28.94■■■□□ 2.22
EDC4-204ENST00000572221 ZNF326Q5BKZ1 582 aaKnown RBP28.9■■■□□ 2.22
EDC4-204ENST00000572221 RTL5Q5HYW3 569 aaPredicted RBP28.89■■■□□ 2.22
EDC4-204ENST00000572221 CDK11AQ9UQ88 783 aaPredicted RBP28.78■■■□□ 2.2
EDC4-204ENST00000572221 P3H3Q8IVL6 736 aa28.71■■■□□ 2.19
EDC4-204ENST00000572221 ZBTB47Q9UFB7 747 aaPredicted RBP28.71■■■□□ 2.19
EDC4-204ENST00000572221 NEFMP07197 916 aa28.62■■■□□ 2.17
EDC4-204ENST00000572221 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
EDC4-204ENST00000572221 ARID3CA6NKF2 412 aa28.56■■■□□ 2.16
EDC4-204ENST00000572221 ZNF777Q9ULD5 760 aaPredicted RBP28.55■■■□□ 2.16
EDC4-204ENST00000572221 BCANQ96GW7 911 aa28.51■■■□□ 2.15
EDC4-204ENST00000572221 CANXP27824 592 aaKnown RBP28.49■■■□□ 2.15
EDC4-204ENST00000572221 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.15
EDC4-204ENST00000572221 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
EDC4-204ENST00000572221 ESF1Q9H501 851 aaKnown RBP28.38■■■□□ 2.13
EDC4-204ENST00000572221 SLC24A1O60721 1099 aa28.34■■■□□ 2.13
EDC4-204ENST00000572221 TONSLQ96HA7 1378 aa28.33■■■□□ 2.12
EDC4-204ENST00000572221 NPM1P06748 294 aaKnown RBP eCLIP28.31■■■□□ 2.12
EDC4-204ENST00000572221 STAG3Q9UJ98 1225 aa28.18■■■□□ 2.1
EDC4-204ENST00000572221 CHGAP10645 457 aaKnown RBP28.14■■■□□ 2.1
EDC4-204ENST00000572221 DCAF1Q9Y4B6 1507 aa28.14■■■□□ 2.09
EDC4-204ENST00000572221 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
EDC4-204ENST00000572221 ANP32AP39687 249 aaKnown RBP28.09■■■□□ 2.09
EDC4-204ENST00000572221 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
EDC4-204ENST00000572221 BCL11AQ9H165 835 aa28.06■■■□□ 2.08
EDC4-204ENST00000572221 TSPY4P0CV99 314 aa28.05■■■□□ 2.08
EDC4-204ENST00000572221 TSPY10P0CW01 314 aa28.05■■■□□ 2.08
EDC4-204ENST00000572221 MTUS2Q5JR59 1369 aa27.99■■■□□ 2.07
EDC4-204ENST00000572221 CHIC2Q9UKJ5 165 aa27.96■■■□□ 2.07
EDC4-204ENST00000572221 CHMP7Q8WUX9 453 aaPredicted RBP27.94■■■□□ 2.06
EDC4-204ENST00000572221 HNRNPUQ00839 825 aaKnown RBP eCLIP27.93■■■□□ 2.06
EDC4-204ENST00000572221 DDX10Q13206 875 aaKnown RBP27.92■■■□□ 2.06
EDC4-204ENST00000572221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.9■■■□□ 2.063e-6■■■■□ 20.5
EDC4-204ENST00000572221 CLIP1P30622 1438 aa27.87■■■□□ 2.05
EDC4-204ENST00000572221 EEA1Q15075 1411 aa27.86■■■□□ 2.05
EDC4-204ENST00000572221 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
EDC4-204ENST00000572221 TMC1Q8TDI8 760 aa27.85■■■□□ 2.05
EDC4-204ENST00000572221 FAM9BQ8IZU0 186 aa27.85■■■□□ 2.05
EDC4-204ENST00000572221 UPF2Q9HAU5 1272 aaKnown RBP27.83■■■□□ 2.05
EDC4-204ENST00000572221 FKBP8Q14318 412 aa27.82■■■□□ 2.04
EDC4-204ENST00000572221 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.8■■■□□ 2.04
EDC4-204ENST00000572221 NPM2Q86SE8 214 aaKnown RBP27.77■■■□□ 2.04
EDC4-204ENST00000572221 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.03
EDC4-204ENST00000572221 WDR43Q15061 677 aaKnown RBP eCLIP27.75■■■□□ 2.03
EDC4-204ENST00000572221 HSP90AA1P07900 732 aaKnown RBP27.73■■■□□ 2.03
EDC4-204ENST00000572221 PLPPR3Q6T4P5 718 aa27.7■■■□□ 2.03
EDC4-204ENST00000572221 KDM2AQ9Y2K7 1162 aa27.7■■■□□ 2.03
EDC4-204ENST00000572221 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
EDC4-204ENST00000572221 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
EDC4-204ENST00000572221 PLEKHD1A6NEE1 506 aa27.67■■■□□ 2.02
EDC4-204ENST00000572221 ANP32BQ92688 251 aaKnown RBP27.67■■■□□ 2.02
EDC4-204ENST00000572221 EIF4G2P78344 907 aaKnown RBP eCLIP27.65■■■□□ 2.02
EDC4-204ENST00000572221 SALL2Q9Y467 1007 aaPredicted RBP27.63■■■□□ 2.01
EDC4-204ENST00000572221 CCDC136Q96JN2 1154 aa27.62■■■□□ 2.01
EDC4-204ENST00000572221 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2.01
EDC4-204ENST00000572221 NACADO15069 1562 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms