RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 NISCHQ9Y2I1 1504 aa43.36■■■■■ 4.53
SNRPB-203ENST00000474384 CCDC180Q9P1Z9 1646 aa38.35■■■■□ 3.73
SNRPB-203ENST00000474384 ABCC9O60706 1549 aa37.29■■■■□ 3.56
SNRPB-203ENST00000474384 DCAF8L2P0C7V8 631 aa36.22■■■■□ 3.39
SNRPB-203ENST00000474384 ZCCHC6Q5VYS8 1495 aaKnown RBP36.17■■■■□ 3.38
SNRPB-203ENST00000474384 NACADO15069 1562 aa35.99■■■■□ 3.35
SNRPB-203ENST00000474384 RB1CC1Q8TDY2 1594 aa35.97■■■■□ 3.35
SNRPB-203ENST00000474384 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
SNRPB-203ENST00000474384 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
SNRPB-203ENST00000474384 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
SNRPB-203ENST00000474384 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
SNRPB-203ENST00000474384 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
SNRPB-203ENST00000474384 BICRAQ9NZM4 1560 aa34.88■■■■□ 3.17
SNRPB-203ENST00000474384 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
SNRPB-203ENST00000474384 DNAJC5BQ9UF47 199 aa33.97■■■■□ 3.03
SNRPB-203ENST00000474384 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
SNRPB-203ENST00000474384 CECR2Q9BXF3 1484 aa33.78■■■■□ 3
SNRPB-203ENST00000474384 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
SNRPB-203ENST00000474384 BAZ1AQ9NRL2 1556 aaPredicted RBP33.57■■■□□ 2.96
SNRPB-203ENST00000474384 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
SNRPB-203ENST00000474384 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
SNRPB-203ENST00000474384 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
SNRPB-203ENST00000474384 SMARCA2P51531 1590 aa33.26■■■□□ 2.92
SNRPB-203ENST00000474384 NCAPD3P42695 1498 aa33.23■■■□□ 2.91
SNRPB-203ENST00000474384 PEG3Q9GZU2 1588 aa33.2■■■□□ 2.91
SNRPB-203ENST00000474384 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
SNRPB-203ENST00000474384 WIZO95785 1651 aa33.11■■■□□ 2.89
SNRPB-203ENST00000474384 HMGXB3Q12766 1538 aa33.07■■■□□ 2.88
SNRPB-203ENST00000474384 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
SNRPB-203ENST00000474384 TOP2AP11388 1531 aaKnown RBP32.74■■■□□ 2.83
SNRPB-203ENST00000474384 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
SNRPB-203ENST00000474384 CCDC88BA6NC98 1476 aa32.4■■■□□ 2.78
SNRPB-203ENST00000474384 NESP48681 1621 aa32.38■■■□□ 2.77
SNRPB-203ENST00000474384 CADPSQ9ULU8 1353 aa32.3■■■□□ 2.76
SNRPB-203ENST00000474384 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
SNRPB-203ENST00000474384 CFTRP13569 1480 aa32.16■■■□□ 2.74
SNRPB-203ENST00000474384 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
SNRPB-203ENST00000474384 PDS5BQ9NTI5 1447 aa32.08■■■□□ 2.73
SNRPB-203ENST00000474384 KIF21AQ7Z4S6 1674 aa31.97■■■□□ 2.71
SNRPB-203ENST00000474384 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
SNRPB-203ENST00000474384 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
SNRPB-203ENST00000474384 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
SNRPB-203ENST00000474384 THOC2Q8NI27 1593 aaKnown RBP31.76■■■□□ 2.67
SNRPB-203ENST00000474384 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
SNRPB-203ENST00000474384 WDR62O43379 1518 aa31.59■■■□□ 2.65
SNRPB-203ENST00000474384 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
SNRPB-203ENST00000474384 CUX2O14529 1486 aa31.59■■■□□ 2.65
SNRPB-203ENST00000474384 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
SNRPB-203ENST00000474384 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
SNRPB-203ENST00000474384 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
SNRPB-203ENST00000474384 CUX1P39880 1505 aa31.35■■■□□ 2.61
SNRPB-203ENST00000474384 WRNQ14191 1432 aaPredicted RBP eCLIP31.27■■■□□ 2.6
SNRPB-203ENST00000474384 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
SNRPB-203ENST00000474384 FGD5Q6ZNL6 1462 aa31.2■■■□□ 2.58
SNRPB-203ENST00000474384 SYNJ1O43426 1573 aa31.18■■■□□ 2.58
SNRPB-203ENST00000474384 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
SNRPB-203ENST00000474384 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
SNRPB-203ENST00000474384 BIVM-ERCC5R4GMW8 1640 aa31.14■■■□□ 2.58
SNRPB-203ENST00000474384 SOGA1O94964 1423 aa31.11■■■□□ 2.57
SNRPB-203ENST00000474384 RAD54L2Q9Y4B4 1467 aa31.11■■■□□ 2.57
SNRPB-203ENST00000474384 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
SNRPB-203ENST00000474384 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
SNRPB-203ENST00000474384 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
SNRPB-203ENST00000474384 AQRO60306 1485 aaKnown RBP eCLIP30.91■■■□□ 2.549e-9■■■■■ 29.1
SNRPB-203ENST00000474384 EIF4G3O43432 1585 aaKnown RBP30.88■■■□□ 2.53
SNRPB-203ENST00000474384 WDR97A6NE52 1622 aa30.88■■■□□ 2.53
SNRPB-203ENST00000474384 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
SNRPB-203ENST00000474384 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
SNRPB-203ENST00000474384 GAPVD1Q14C86 1478 aa30.75■■■□□ 2.51
SNRPB-203ENST00000474384 ABCA5Q8WWZ7 1642 aa30.72■■■□□ 2.51
SNRPB-203ENST00000474384 CHIC1Q5VXU3 224 aa30.69■■■□□ 2.5
SNRPB-203ENST00000474384 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
SNRPB-203ENST00000474384 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
SNRPB-203ENST00000474384 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
SNRPB-203ENST00000474384 KIF27Q86VH2 1401 aa30.59■■■□□ 2.49
SNRPB-203ENST00000474384 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
SNRPB-203ENST00000474384 FBLN2P98095 1184 aa30.51■■■□□ 2.47
SNRPB-203ENST00000474384 ERICH3Q5RHP9 1530 aa30.51■■■□□ 2.47
SNRPB-203ENST00000474384 DNAJC5Q9H3Z4 198 aa30.5■■■□□ 2.47
SNRPB-203ENST00000474384 RUSC2Q8N2Y8 1516 aa30.48■■■□□ 2.47
SNRPB-203ENST00000474384 IGF1RP08069 1367 aa30.45■■■□□ 2.47
SNRPB-203ENST00000474384 CHMP7Q8WUX9 453 aaPredicted RBP30.45■■■□□ 2.47
SNRPB-203ENST00000474384 CHD1O14646 1710 aa30.44■■■□□ 2.46
SNRPB-203ENST00000474384 SYNJ2O15056 1496 aa30.43■■■□□ 2.46
SNRPB-203ENST00000474384 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
SNRPB-203ENST00000474384 OSCARQ8IYS5 282 aa30.41■■■□□ 2.46
SNRPB-203ENST00000474384 FHAD1B1AJZ9 1412 aa30.39■■■□□ 2.45
SNRPB-203ENST00000474384 CUL7Q14999 1698 aa30.3■■■□□ 2.44
SNRPB-203ENST00000474384 GRIN2AQ12879 1464 aa30.29■■■□□ 2.44
SNRPB-203ENST00000474384 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
SNRPB-203ENST00000474384 FAM9AQ8IZU1 332 aaPredicted RBP30.24■■■□□ 2.43
SNRPB-203ENST00000474384 EEA1Q15075 1411 aa30.21■■■□□ 2.43
SNRPB-203ENST00000474384 CSRNP3Q8WYN3 585 aa30.19■■■□□ 2.42
SNRPB-203ENST00000474384 NUP160Q12769 1436 aa30.13■■■□□ 2.41
SNRPB-203ENST00000474384 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
SNRPB-203ENST00000474384 RAPGEF2Q9Y4G8 1499 aa30.12■■■□□ 2.41
SNRPB-203ENST00000474384 CLASP1Q7Z460 1538 aa30.1■■■□□ 2.41
SNRPB-203ENST00000474384 PRXQ9BXM0 1461 aa30.08■■■□□ 2.41
SNRPB-203ENST00000474384 KIAA0586Q9BVV6 1533 aa29.93■■■□□ 2.38
SNRPB-203ENST00000474384 ARHGEF11O15085 1522 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms