RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
ARHGEF28-202ENST00000296799 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
ARHGEF28-202ENST00000296799 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
ARHGEF28-202ENST00000296799 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
ARHGEF28-202ENST00000296799 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
ARHGEF28-202ENST00000296799 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.45
ARHGEF28-202ENST00000296799 APLP2Q06481 763 aa23.9■■□□□ 1.42
ARHGEF28-202ENST00000296799 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
ARHGEF28-202ENST00000296799 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
ARHGEF28-202ENST00000296799 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
ARHGEF28-202ENST00000296799 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
ARHGEF28-202ENST00000296799 UBTFP17480 764 aaKnown RBP23.42■■□□□ 1.34
ARHGEF28-202ENST00000296799 ABCC9O60706 1549 aa23.28■■□□□ 1.32
ARHGEF28-202ENST00000296799 ATP1B4Q9UN42 357 aaPredicted RBP23.27■■□□□ 1.32
ARHGEF28-202ENST00000296799 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
ARHGEF28-202ENST00000296799 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
ARHGEF28-202ENST00000296799 CCER1Q8TC90 406 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF28-202ENST00000296799 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
ARHGEF28-202ENST00000296799 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
ARHGEF28-202ENST00000296799 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
ARHGEF28-202ENST00000296799 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
ARHGEF28-202ENST00000296799 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
ARHGEF28-202ENST00000296799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
ARHGEF28-202ENST00000296799 HNRNPUL2Q1KMD3 747 aaKnown RBP22.57■■□□□ 1.2
ARHGEF28-202ENST00000296799 ITGAEP38570 1179 aa22.54■■□□□ 1.2
ARHGEF28-202ENST00000296799 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
ARHGEF28-202ENST00000296799 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
ARHGEF28-202ENST00000296799 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
ARHGEF28-202ENST00000296799 HRCP23327 699 aa22.26■■□□□ 1.15
ARHGEF28-202ENST00000296799 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
ARHGEF28-202ENST00000296799 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
ARHGEF28-202ENST00000296799 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
ARHGEF28-202ENST00000296799 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
ARHGEF28-202ENST00000296799 FAM50AQ14320 339 aaKnown RBP22.04■■□□□ 1.12
ARHGEF28-202ENST00000296799 FBLN2P98095 1184 aa22.03■■□□□ 1.12
ARHGEF28-202ENST00000296799 POLR3GLQ9BT43 218 aa21.98■■□□□ 1.11
ARHGEF28-202ENST00000296799 NEFLP07196 543 aa21.95■■□□□ 1.1
ARHGEF28-202ENST00000296799 P3H3Q8IVL6 736 aa21.88■■□□□ 1.09
ARHGEF28-202ENST00000296799 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
ARHGEF28-202ENST00000296799 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
ARHGEF28-202ENST00000296799 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
ARHGEF28-202ENST00000296799 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
ARHGEF28-202ENST00000296799 NEUROD1Q13562 356 aa21.71■■□□□ 1.07
ARHGEF28-202ENST00000296799 ERICH6Q7L0X2 663 aa21.68■■□□□ 1.06
ARHGEF28-202ENST00000296799 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
ARHGEF28-202ENST00000296799 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.05
ARHGEF28-202ENST00000296799 MYT1Q01538 1121 aa21.63■■□□□ 1.05
ARHGEF28-202ENST00000296799 NACADO15069 1562 aa21.62■■□□□ 1.05
ARHGEF28-202ENST00000296799 SLC4A1APQ9BWU0 796 aaKnown RBP21.54■■□□□ 1.04
ARHGEF28-202ENST00000296799 CDK11AQ9UQ88 783 aaPredicted RBP21.5■■□□□ 1.03
ARHGEF28-202ENST00000296799 ZNF326Q5BKZ1 582 aaKnown RBP21.5■■□□□ 1.03
ARHGEF28-202ENST00000296799 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF28-202ENST00000296799 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
ARHGEF28-202ENST00000296799 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1
ARHGEF28-202ENST00000296799 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
ARHGEF28-202ENST00000296799 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
ARHGEF28-202ENST00000296799 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
ARHGEF28-202ENST00000296799 WRNQ14191 1432 aaPredicted RBP eCLIP21.26■□□□□ 0.99
ARHGEF28-202ENST00000296799 ANP32CO43423 234 aa21.24■□□□□ 0.99
ARHGEF28-202ENST00000296799 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
ARHGEF28-202ENST00000296799 CLIP1P30622 1438 aa21.22■□□□□ 0.99
ARHGEF28-202ENST00000296799 NPM1P06748 294 aaKnown RBP eCLIP21.19■□□□□ 0.98
ARHGEF28-202ENST00000296799 EEA1Q15075 1411 aa21.18■□□□□ 0.98
ARHGEF28-202ENST00000296799 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
ARHGEF28-202ENST00000296799 CHIC2Q9UKJ5 165 aa21.16■□□□□ 0.98
ARHGEF28-202ENST00000296799 MTUS2Q5JR59 1369 aa21.14■□□□□ 0.97
ARHGEF28-202ENST00000296799 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
ARHGEF28-202ENST00000296799 TONSLQ96HA7 1378 aa21.07■□□□□ 0.96
ARHGEF28-202ENST00000296799 DAXXQ9UER7 740 aaPredicted RBP21.07■□□□□ 0.96
ARHGEF28-202ENST00000296799 KIF27Q86VH2 1401 aa21.06■□□□□ 0.96
ARHGEF28-202ENST00000296799 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
ARHGEF28-202ENST00000296799 BCANQ96GW7 911 aa21.05■□□□□ 0.96
ARHGEF28-202ENST00000296799 TSPY4P0CV99 314 aa21.04■□□□□ 0.96
ARHGEF28-202ENST00000296799 TSPY10P0CW01 314 aa21.04■□□□□ 0.96
ARHGEF28-202ENST00000296799 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
ARHGEF28-202ENST00000296799 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
ARHGEF28-202ENST00000296799 CHGAP10645 457 aaKnown RBP20.98■□□□□ 0.95
ARHGEF28-202ENST00000296799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.97■□□□□ 0.951e-6■■□□□ 13.1
ARHGEF28-202ENST00000296799 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.95
ARHGEF28-202ENST00000296799 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
ARHGEF28-202ENST00000296799 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
ARHGEF28-202ENST00000296799 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
ARHGEF28-202ENST00000296799 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
ARHGEF28-202ENST00000296799 KCNH8Q96L42 1107 aa20.89■□□□□ 0.94
ARHGEF28-202ENST00000296799 RRP7BPQ9NSQ0 103 aa20.88■□□□□ 0.93
ARHGEF28-202ENST00000296799 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
ARHGEF28-202ENST00000296799 DDX10Q13206 875 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-202ENST00000296799 CCDC88BA6NC98 1476 aa20.85■□□□□ 0.93
ARHGEF28-202ENST00000296799 ERCC6Q03468 1493 aa20.84■□□□□ 0.93
ARHGEF28-202ENST00000296799 SOGA1O94964 1423 aa20.84■□□□□ 0.93
ARHGEF28-202ENST00000296799 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
ARHGEF28-202ENST00000296799 KDM2AQ9Y2K7 1162 aa20.79■□□□□ 0.92
ARHGEF28-202ENST00000296799 CUX2O14529 1486 aa20.78■□□□□ 0.92
ARHGEF28-202ENST00000296799 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
ARHGEF28-202ENST00000296799 NEFMP07197 916 aa20.77■□□□□ 0.92
ARHGEF28-202ENST00000296799 CFDP1Q9UEE9 299 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF28-202ENST00000296799 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
ARHGEF28-202ENST00000296799 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
ARHGEF28-202ENST00000296799 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
ARHGEF28-202ENST00000296799 HIRIP3Q9BW71 556 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms