RNA–Protein interactions for RNA: ENST00000512883.1

ARHGEF28-211, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2 BASIC

Gene ARHGEF28, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-211ENST00000512883 NISCHQ9Y2I1 1504 aa30.25■■■□□ 2.43
ARHGEF28-211ENST00000512883 SHROOM4Q9ULL8 1493 aa27.27■■□□□ 1.96
ARHGEF28-211ENST00000512883 HRCP23327 699 aa27.27■■□□□ 1.96
ARHGEF28-211ENST00000512883 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
ARHGEF28-211ENST00000512883 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
ARHGEF28-211ENST00000512883 PCGF6Q9BYE7 350 aa26.93■■□□□ 1.9
ARHGEF28-211ENST00000512883 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.86
ARHGEF28-211ENST00000512883 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
ARHGEF28-211ENST00000512883 PELP1Q8IZL8 1130 aaKnown RBP26.11■■□□□ 1.77
ARHGEF28-211ENST00000512883 LOC105371045A0A1W2PR82 267 aa26.09■■□□□ 1.77
ARHGEF28-211ENST00000512883 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
ARHGEF28-211ENST00000512883 TRIM26Q12899 539 aaPredicted RBP25.87■■□□□ 1.73
ARHGEF28-211ENST00000512883 SCAF1Q9H7N4 1312 aaKnown RBP25.86■■□□□ 1.73
ARHGEF28-211ENST00000512883 DCAF8L2P0C7V8 631 aa25.82■■□□□ 1.72
ARHGEF28-211ENST00000512883 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
ARHGEF28-211ENST00000512883 ZEB1P37275 1124 aaPredicted RBP25.57■■□□□ 1.68
ARHGEF28-211ENST00000512883 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
ARHGEF28-211ENST00000512883 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
ARHGEF28-211ENST00000512883 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
ARHGEF28-211ENST00000512883 NEUROD1Q13562 356 aa25.2■■□□□ 1.62
ARHGEF28-211ENST00000512883 ACIN1Q9UKV3 1341 aaKnown RBP25.19■■□□□ 1.62
ARHGEF28-211ENST00000512883 GTF3C3Q9Y5Q9 886 aa25.09■■□□□ 1.61
ARHGEF28-211ENST00000512883 MYT1Q01538 1121 aa25.01■■□□□ 1.59
ARHGEF28-211ENST00000512883 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
ARHGEF28-211ENST00000512883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
ARHGEF28-211ENST00000512883 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
ARHGEF28-211ENST00000512883 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.58
ARHGEF28-211ENST00000512883 DIEXFQ68CQ4 756 aaKnown RBP24.84■■□□□ 1.57
ARHGEF28-211ENST00000512883 YTHDC1Q96MU7 727 aaKnown RBP24.65■■□□□ 1.54
ARHGEF28-211ENST00000512883 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
ARHGEF28-211ENST00000512883 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.5
ARHGEF28-211ENST00000512883 ABCC9O60706 1549 aa24.4■■□□□ 1.5
ARHGEF28-211ENST00000512883 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
ARHGEF28-211ENST00000512883 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
ARHGEF28-211ENST00000512883 MIER1Q8N108 512 aa24.23■■□□□ 1.47
ARHGEF28-211ENST00000512883 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
ARHGEF28-211ENST00000512883 HNRNPUL2Q1KMD3 747 aaKnown RBP23.94■■□□□ 1.42
ARHGEF28-211ENST00000512883 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
ARHGEF28-211ENST00000512883 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
ARHGEF28-211ENST00000512883 UBTFP17480 764 aaKnown RBP23.82■■□□□ 1.4
ARHGEF28-211ENST00000512883 SUPT16HQ9Y5B9 1047 aaKnown RBP23.8■■□□□ 1.4
ARHGEF28-211ENST00000512883 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
ARHGEF28-211ENST00000512883 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
ARHGEF28-211ENST00000512883 ANP32EQ9BTT0 268 aa23.7■■□□□ 1.38
ARHGEF28-211ENST00000512883 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.38
ARHGEF28-211ENST00000512883 BCL11AQ9H165 835 aa23.68■■□□□ 1.38
ARHGEF28-211ENST00000512883 WIZO95785 1651 aa23.66■■□□□ 1.38
ARHGEF28-211ENST00000512883 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
ARHGEF28-211ENST00000512883 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
ARHGEF28-211ENST00000512883 SOGA1O94964 1423 aa23.62■■□□□ 1.37
ARHGEF28-211ENST00000512883 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
ARHGEF28-211ENST00000512883 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
ARHGEF28-211ENST00000512883 BCANQ96GW7 911 aa23.55■■□□□ 1.36
ARHGEF28-211ENST00000512883 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF28-211ENST00000512883 CLSPNQ9HAW4 1339 aa23.49■■□□□ 1.35
ARHGEF28-211ENST00000512883 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
ARHGEF28-211ENST00000512883 APLP2Q06481 763 aa23.42■■□□□ 1.34
ARHGEF28-211ENST00000512883 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
ARHGEF28-211ENST00000512883 KCNH8Q96L42 1107 aa23.36■■□□□ 1.33
ARHGEF28-211ENST00000512883 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
ARHGEF28-211ENST00000512883 NACADO15069 1562 aa23.32■■□□□ 1.32
ARHGEF28-211ENST00000512883 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
ARHGEF28-211ENST00000512883 FKBP8Q14318 412 aa23.29■■□□□ 1.32
ARHGEF28-211ENST00000512883 CLIP1P30622 1438 aa23.22■■□□□ 1.31
ARHGEF28-211ENST00000512883 EEA1Q15075 1411 aa23.21■■□□□ 1.31
ARHGEF28-211ENST00000512883 DHX57Q6P158 1386 aaKnown RBP23.18■■□□□ 1.3
ARHGEF28-211ENST00000512883 RBM19Q9Y4C8 960 aaKnown RBP23.16■■□□□ 1.3
ARHGEF28-211ENST00000512883 ITGAEP38570 1179 aa23.16■■□□□ 1.3
ARHGEF28-211ENST00000512883 VPS8Q8N3P4 1428 aa23.12■■□□□ 1.29
ARHGEF28-211ENST00000512883 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
ARHGEF28-211ENST00000512883 NEFLP07196 543 aa23.07■■□□□ 1.28
ARHGEF28-211ENST00000512883 SMARCA2P51531 1590 aa23.05■■□□□ 1.28
ARHGEF28-211ENST00000512883 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
ARHGEF28-211ENST00000512883 DDX10Q13206 875 aaKnown RBP23.02■■□□□ 1.28
ARHGEF28-211ENST00000512883 TRIM52Q96A61 297 aa23■■□□□ 1.27
ARHGEF28-211ENST00000512883 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.27
ARHGEF28-211ENST00000512883 MSH5O43196 834 aa22.95■■□□□ 1.26
ARHGEF28-211ENST00000512883 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
ARHGEF28-211ENST00000512883 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
ARHGEF28-211ENST00000512883 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
ARHGEF28-211ENST00000512883 ERICH6Q7L0X2 663 aa22.88■■□□□ 1.25
ARHGEF28-211ENST00000512883 KIF21BO75037 1637 aa22.87■■□□□ 1.25
ARHGEF28-211ENST00000512883 SMARCA4P51532 1647 aa22.83■■□□□ 1.24
ARHGEF28-211ENST00000512883 IRX6P78412 446 aaPredicted RBP22.8■■□□□ 1.24
ARHGEF28-211ENST00000512883 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
ARHGEF28-211ENST00000512883 SIN3AQ96ST3 1273 aa22.76■■□□□ 1.23
ARHGEF28-211ENST00000512883 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
ARHGEF28-211ENST00000512883 ANP32CO43423 234 aa22.71■■□□□ 1.23
ARHGEF28-211ENST00000512883 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.23
ARHGEF28-211ENST00000512883 CDK11AQ9UQ88 783 aaPredicted RBP22.68■■□□□ 1.22
ARHGEF28-211ENST00000512883 CCNB3Q8WWL7 1395 aa22.67■■□□□ 1.22
ARHGEF28-211ENST00000512883 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
ARHGEF28-211ENST00000512883 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF28-211ENST00000512883 RRBP1Q9P2E9 1410 aaKnown RBP22.63■■□□□ 1.21
ARHGEF28-211ENST00000512883 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
ARHGEF28-211ENST00000512883 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
ARHGEF28-211ENST00000512883 FANCIQ9NVI1 1328 aa22.6■■□□□ 1.21
ARHGEF28-211ENST00000512883 CCER2I3L3R5 266 aa22.58■■□□□ 1.2
ARHGEF28-211ENST00000512883 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
ARHGEF28-211ENST00000512883 PRKCSHP14314 528 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms