RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
ARHGEF28-204ENST00000437974 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
ARHGEF28-204ENST00000437974 NISCHQ9Y2I1 1504 aa29.95■■■□□ 2.39
ARHGEF28-204ENST00000437974 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
ARHGEF28-204ENST00000437974 EHMT2Q96KQ7 1210 aa29.22■■■□□ 2.27
ARHGEF28-204ENST00000437974 APLP2Q06481 763 aa28.92■■■□□ 2.22
ARHGEF28-204ENST00000437974 FAM9AQ8IZU1 332 aaPredicted RBP28.82■■■□□ 2.2
ARHGEF28-204ENST00000437974 PELP1Q8IZL8 1130 aaKnown RBP28.56■■■□□ 2.16
ARHGEF28-204ENST00000437974 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
ARHGEF28-204ENST00000437974 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
ARHGEF28-204ENST00000437974 PCGF6Q9BYE7 350 aa28.09■■■□□ 2.09
ARHGEF28-204ENST00000437974 ATP1B4Q9UN42 357 aaPredicted RBP28■■■□□ 2.07
ARHGEF28-204ENST00000437974 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
ARHGEF28-204ENST00000437974 UBTFP17480 764 aaKnown RBP27.68■■■□□ 2.02
ARHGEF28-204ENST00000437974 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
ARHGEF28-204ENST00000437974 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
ARHGEF28-204ENST00000437974 CENPBP07199 599 aaPredicted RBP27.44■■□□□ 1.98
ARHGEF28-204ENST00000437974 ERICH6Q7L0X2 663 aa27.35■■□□□ 1.97
ARHGEF28-204ENST00000437974 MYT1LQ9UL68 1186 aa27.18■■□□□ 1.94
ARHGEF28-204ENST00000437974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
ARHGEF28-204ENST00000437974 HNRNPUL2Q1KMD3 747 aaKnown RBP27.09■■□□□ 1.93
ARHGEF28-204ENST00000437974 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
ARHGEF28-204ENST00000437974 NEFLP07196 543 aa27.05■■□□□ 1.92
ARHGEF28-204ENST00000437974 YTHDC1Q96MU7 727 aaKnown RBP27.03■■□□□ 1.92
ARHGEF28-204ENST00000437974 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
ARHGEF28-204ENST00000437974 ITGAEP38570 1179 aa26.8■■□□□ 1.88
ARHGEF28-204ENST00000437974 POLR3GLQ9BT43 218 aa26.73■■□□□ 1.87
ARHGEF28-204ENST00000437974 HRCP23327 699 aa26.65■■□□□ 1.86
ARHGEF28-204ENST00000437974 LOC105371045A0A1W2PR82 267 aa26.64■■□□□ 1.86
ARHGEF28-204ENST00000437974 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
ARHGEF28-204ENST00000437974 SLC4A1APQ9BWU0 796 aaKnown RBP26.42■■□□□ 1.82
ARHGEF28-204ENST00000437974 DAXXQ9UER7 740 aaPredicted RBP26.39■■□□□ 1.82
ARHGEF28-204ENST00000437974 CNGB1Q14028 1251 aaPredicted RBP26.36■■□□□ 1.81
ARHGEF28-204ENST00000437974 MYT1Q01538 1121 aa26.3■■□□□ 1.8
ARHGEF28-204ENST00000437974 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
ARHGEF28-204ENST00000437974 ABCC9O60706 1549 aa26.2■■□□□ 1.79
ARHGEF28-204ENST00000437974 FAM50AQ14320 339 aaKnown RBP26.14■■□□□ 1.78
ARHGEF28-204ENST00000437974 TRIM52Q96A61 297 aa26.08■■□□□ 1.77
ARHGEF28-204ENST00000437974 FBLN2P98095 1184 aa26.02■■□□□ 1.76
ARHGEF28-204ENST00000437974 DIEXFQ68CQ4 756 aaKnown RBP25.96■■□□□ 1.75
ARHGEF28-204ENST00000437974 CLSPNQ9HAW4 1339 aa25.9■■□□□ 1.74
ARHGEF28-204ENST00000437974 NEUROD1Q13562 356 aa25.8■■□□□ 1.72
ARHGEF28-204ENST00000437974 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.71
ARHGEF28-204ENST00000437974 ZNF316A6NFI3 1004 aaPredicted RBP25.72■■□□□ 1.71
ARHGEF28-204ENST00000437974 BCANQ96GW7 911 aa25.69■■□□□ 1.7
ARHGEF28-204ENST00000437974 ZBTB47Q9UFB7 747 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF28-204ENST00000437974 SLC24A1O60721 1099 aa25.56■■□□□ 1.68
ARHGEF28-204ENST00000437974 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
ARHGEF28-204ENST00000437974 P3H3Q8IVL6 736 aa25.51■■□□□ 1.67
ARHGEF28-204ENST00000437974 RTL5Q5HYW3 569 aaPredicted RBP25.5■■□□□ 1.67
ARHGEF28-204ENST00000437974 ANP32CO43423 234 aa25.48■■□□□ 1.67
ARHGEF28-204ENST00000437974 NEFMP07197 916 aa25.48■■□□□ 1.67
ARHGEF28-204ENST00000437974 GTF3C3Q9Y5Q9 886 aa25.48■■□□□ 1.67
ARHGEF28-204ENST00000437974 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
ARHGEF28-204ENST00000437974 ZNF777Q9ULD5 760 aaPredicted RBP25.44■■□□□ 1.66
ARHGEF28-204ENST00000437974 CDK11AQ9UQ88 783 aaPredicted RBP25.41■■□□□ 1.66
ARHGEF28-204ENST00000437974 CANXP27824 592 aaKnown RBP25.36■■□□□ 1.65
ARHGEF28-204ENST00000437974 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
ARHGEF28-204ENST00000437974 NPM1P06748 294 aaKnown RBP eCLIP25.29■■□□□ 1.64
ARHGEF28-204ENST00000437974 BCL11AQ9H165 835 aa25.27■■□□□ 1.64
ARHGEF28-204ENST00000437974 STAG3Q9UJ98 1225 aa25.25■■□□□ 1.63
ARHGEF28-204ENST00000437974 CHGAP10645 457 aaKnown RBP25.18■■□□□ 1.62
ARHGEF28-204ENST00000437974 PLPPR3Q6T4P5 718 aa25.18■■□□□ 1.62
ARHGEF28-204ENST00000437974 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
ARHGEF28-204ENST00000437974 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
ARHGEF28-204ENST00000437974 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
ARHGEF28-204ENST00000437974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.87■■□□□ 1.571e-6■■□□□ 13.1
ARHGEF28-204ENST00000437974 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
ARHGEF28-204ENST00000437974 ZCCHC6Q5VYS8 1495 aaKnown RBP24.81■■□□□ 1.56
ARHGEF28-204ENST00000437974 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
ARHGEF28-204ENST00000437974 TSPY4P0CV99 314 aa24.79■■□□□ 1.56
ARHGEF28-204ENST00000437974 TSPY10P0CW01 314 aa24.79■■□□□ 1.56
ARHGEF28-204ENST00000437974 CHIC2Q9UKJ5 165 aa24.77■■□□□ 1.56
ARHGEF28-204ENST00000437974 FKBP8Q14318 412 aa24.73■■□□□ 1.55
ARHGEF28-204ENST00000437974 ANP32AP39687 249 aaKnown RBP24.72■■□□□ 1.55
ARHGEF28-204ENST00000437974 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
ARHGEF28-204ENST00000437974 NPM2Q86SE8 214 aaKnown RBP24.68■■□□□ 1.54
ARHGEF28-204ENST00000437974 DDX10Q13206 875 aaKnown RBP24.66■■□□□ 1.54
ARHGEF28-204ENST00000437974 HSP90AA1P07900 732 aaKnown RBP24.63■■□□□ 1.53
ARHGEF28-204ENST00000437974 MTUS2Q5JR59 1369 aa24.62■■□□□ 1.53
ARHGEF28-204ENST00000437974 HNRNPUQ00839 825 aaKnown RBP eCLIP24.61■■□□□ 1.53
ARHGEF28-204ENST00000437974 FAM9BQ8IZU0 186 aa24.6■■□□□ 1.53
ARHGEF28-204ENST00000437974 KDM2AQ9Y2K7 1162 aa24.6■■□□□ 1.53
ARHGEF28-204ENST00000437974 UPF2Q9HAU5 1272 aaKnown RBP24.58■■□□□ 1.53
ARHGEF28-204ENST00000437974 SALL2Q9Y467 1007 aaPredicted RBP24.57■■□□□ 1.52
ARHGEF28-204ENST00000437974 A0A0G2JS52 829 aa24.56■■□□□ 1.52
ARHGEF28-204ENST00000437974 WDR43Q15061 677 aaKnown RBP eCLIP24.56■■□□□ 1.52
ARHGEF28-204ENST00000437974 TMC1Q8TDI8 760 aa24.56■■□□□ 1.52
ARHGEF28-204ENST00000437974 PPP1R15AO75807 674 aaPredicted RBP24.53■■□□□ 1.52
ARHGEF28-204ENST00000437974 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
ARHGEF28-204ENST00000437974 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.5■■□□□ 1.51
ARHGEF28-204ENST00000437974 ANP32BQ92688 251 aaKnown RBP24.49■■□□□ 1.51
ARHGEF28-204ENST00000437974 ZBTB7CA1YPR0 619 aa24.47■■□□□ 1.51
ARHGEF28-204ENST00000437974 C14orf37Q86TY3 774 aa24.47■■□□□ 1.51
ARHGEF28-204ENST00000437974 PLEKHD1A6NEE1 506 aa24.45■■□□□ 1.5
ARHGEF28-204ENST00000437974 PLEKHG5O94827 1062 aa24.42■■□□□ 1.5
ARHGEF28-204ENST00000437974 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
ARHGEF28-204ENST00000437974 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
ARHGEF28-204ENST00000437974 ARID4BQ4LE39 1312 aaPredicted RBP24.4■■□□□ 1.5
ARHGEF28-204ENST00000437974 MIER1Q8N108 512 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms