RNA–Protein interactions for RNA: ENST00000252485.8

NECTIN2-202, Transcript of nectin cell adhesion molecule 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN2, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN2-202ENST00000252485 NISCHQ9Y2I1 1504 aa49■■■■■ 5.43
NECTIN2-202ENST00000252485 CCDC180Q9P1Z9 1646 aa42.71■■■■■ 4.43
NECTIN2-202ENST00000252485 ZCCHC6Q5VYS8 1495 aaKnown RBP41.12■■■■■ 4.17
NECTIN2-202ENST00000252485 ABCC9O60706 1549 aa40.63■■■■■ 4.1
NECTIN2-202ENST00000252485 DCAF8L2P0C7V8 631 aa40.52■■■■■ 4.08
NECTIN2-202ENST00000252485 DCAF1Q9Y4B6 1507 aa40.5■■■■■ 4.07
NECTIN2-202ENST00000252485 SHROOM4Q9ULL8 1493 aa40.41■■■■■ 4.06
NECTIN2-202ENST00000252485 MYO15BQ96JP2 1530 aa40.09■■■■■ 4.01
NECTIN2-202ENST00000252485 NACADO15069 1562 aa39.87■■■■□ 3.97
NECTIN2-202ENST00000252485 SUPT5HO00267 1087 aaKnown RBP39.8■■■■□ 3.96
NECTIN2-202ENST00000252485 RB1CC1Q8TDY2 1594 aa39.55■■■■□ 3.92
NECTIN2-202ENST00000252485 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
NECTIN2-202ENST00000252485 CHIC1Q5VXU3 224 aa39.03■■■■□ 3.84
NECTIN2-202ENST00000252485 UNC13AQ9UPW8 1703 aa38.73■■■■□ 3.79
NECTIN2-202ENST00000252485 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
NECTIN2-202ENST00000252485 PABPN1Q86U42 306 aaKnown RBP eCLIP38.33■■■■□ 3.73
NECTIN2-202ENST00000252485 HRCP23327 699 aa38.28■■■■□ 3.72
NECTIN2-202ENST00000252485 CECR2Q9BXF3 1484 aa38.13■■■■□ 3.69
NECTIN2-202ENST00000252485 RSF1Q96T23 1441 aaPredicted RBP37.98■■■■□ 3.67
NECTIN2-202ENST00000252485 PCGF6Q9BYE7 350 aa37.9■■■■□ 3.66
NECTIN2-202ENST00000252485 MROH2BQ7Z745 1585 aa37.87■■■■□ 3.65
NECTIN2-202ENST00000252485 BAZ1AQ9NRL2 1556 aaPredicted RBP37.81■■■■□ 3.64
NECTIN2-202ENST00000252485 LOC105371045A0A1W2PR82 267 aa37.67■■■■□ 3.62
NECTIN2-202ENST00000252485 SMARCA4P51532 1647 aa37.67■■■■□ 3.62
NECTIN2-202ENST00000252485 WIZO95785 1651 aa37.51■■■■□ 3.59
NECTIN2-202ENST00000252485 TRIM26Q12899 539 aaPredicted RBP37.37■■■■□ 3.57
NECTIN2-202ENST00000252485 EIF4G1Q04637 1599 aaKnown RBP37.26■■■■□ 3.56
NECTIN2-202ENST00000252485 PEG3Q9GZU2 1588 aa37.24■■■■□ 3.55
NECTIN2-202ENST00000252485 TRIM41Q8WV44 630 aa37.24■■■■□ 3.55
NECTIN2-202ENST00000252485 ATAD2BQ9ULI0 1458 aa37.14■■■■□ 3.54
NECTIN2-202ENST00000252485 PPARGC1BQ86YN6 1023 aaKnown RBP37.11■■■■□ 3.53
NECTIN2-202ENST00000252485 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
NECTIN2-202ENST00000252485 SMARCA2P51531 1590 aa37.06■■■■□ 3.52
NECTIN2-202ENST00000252485 BAZ1BQ9UIG0 1483 aaKnown RBP36.88■■■■□ 3.49
NECTIN2-202ENST00000252485 NCAPD3P42695 1498 aa36.86■■■■□ 3.49
NECTIN2-202ENST00000252485 ZEB1P37275 1124 aaPredicted RBP36.83■■■■□ 3.49
NECTIN2-202ENST00000252485 CCDC88BA6NC98 1476 aa36.77■■■■□ 3.48
NECTIN2-202ENST00000252485 CC2D2AQ9P2K1 1620 aa36.74■■■■□ 3.47
NECTIN2-202ENST00000252485 HMGXB3Q12766 1538 aa36.74■■■■□ 3.47
NECTIN2-202ENST00000252485 FAM9AQ8IZU1 332 aaPredicted RBP36.68■■■■□ 3.46
NECTIN2-202ENST00000252485 EHMT2Q96KQ7 1210 aa36.14■■■■□ 3.38
NECTIN2-202ENST00000252485 DNAJC5BQ9UF47 199 aa36.11■■■■□ 3.37
NECTIN2-202ENST00000252485 CFTRP13569 1480 aa35.99■■■■□ 3.35
NECTIN2-202ENST00000252485 ABCC8Q09428 1581 aa35.99■■■■□ 3.35
NECTIN2-202ENST00000252485 WRNQ14191 1432 aaPredicted RBP eCLIP35.98■■■■□ 3.35
NECTIN2-202ENST00000252485 EEA1Q15075 1411 aa35.93■■■■□ 3.34
NECTIN2-202ENST00000252485 CADPSQ9ULU8 1353 aa35.9■■■■□ 3.34
NECTIN2-202ENST00000252485 TNIKQ9UKE5 1360 aa35.81■■■■□ 3.32
NECTIN2-202ENST00000252485 CEP162Q5TB80 1403 aa35.76■■■■□ 3.32
NECTIN2-202ENST00000252485 SOGA1O94964 1423 aa35.72■■■■□ 3.31
NECTIN2-202ENST00000252485 NESP48681 1621 aa35.65■■■■□ 3.3
NECTIN2-202ENST00000252485 CSRNP3Q8WYN3 585 aa35.65■■■■□ 3.3
NECTIN2-202ENST00000252485 PRDM2Q13029 1718 aa35.64■■■■□ 3.3
NECTIN2-202ENST00000252485 CCER1Q8TC90 406 aaPredicted RBP35.61■■■■□ 3.29
NECTIN2-202ENST00000252485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.57■■■■□ 3.29
NECTIN2-202ENST00000252485 LAMC3Q9Y6N6 1575 aa35.57■■■■□ 3.28
NECTIN2-202ENST00000252485 SYNJ1O43426 1573 aa35.56■■■■□ 3.28
NECTIN2-202ENST00000252485 GOLGA3Q08378 1498 aa35.54■■■■□ 3.28
NECTIN2-202ENST00000252485 RUSC2Q8N2Y8 1516 aa35.48■■■■□ 3.27
NECTIN2-202ENST00000252485 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
NECTIN2-202ENST00000252485 TOP2BQ02880 1626 aa35.42■■■■□ 3.26
NECTIN2-202ENST00000252485 CUX1P39880 1505 aa35.41■■■■□ 3.26
NECTIN2-202ENST00000252485 UBTFP17480 764 aaKnown RBP35.38■■■■□ 3.25
NECTIN2-202ENST00000252485 BIVM-ERCC5R4GMW8 1640 aa35.36■■■■□ 3.25
NECTIN2-202ENST00000252485 KIF21BO75037 1637 aa35.35■■■■□ 3.25
NECTIN2-202ENST00000252485 CEP164Q9UPV0 1460 aa35.34■■■■□ 3.25
NECTIN2-202ENST00000252485 PDS5BQ9NTI5 1447 aa35.32■■■■□ 3.25
NECTIN2-202ENST00000252485 SCAF1Q9H7N4 1312 aaKnown RBP35.27■■■■□ 3.24
NECTIN2-202ENST00000252485 PELP1Q8IZL8 1130 aaKnown RBP35.2■■■■□ 3.22
NECTIN2-202ENST00000252485 KIF21AQ7Z4S6 1674 aa35.13■■■■□ 3.21
NECTIN2-202ENST00000252485 TTBK1Q5TCY1 1321 aaPredicted RBP35.1■■■■□ 3.21
NECTIN2-202ENST00000252485 DNMBPQ6XZF7 1577 aa35.09■■■■□ 3.21
NECTIN2-202ENST00000252485 DIEXFQ68CQ4 756 aaKnown RBP35.09■■■■□ 3.21
NECTIN2-202ENST00000252485 TOPBP1Q92547 1522 aa35.07■■■■□ 3.21
NECTIN2-202ENST00000252485 CLIP1P30622 1438 aa35.07■■■■□ 3.2
NECTIN2-202ENST00000252485 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
NECTIN2-202ENST00000252485 FGD5Q6ZNL6 1462 aa35.03■■■■□ 3.2
NECTIN2-202ENST00000252485 VPS8Q8N3P4 1428 aa35.01■■■■□ 3.2
NECTIN2-202ENST00000252485 ACIN1Q9UKV3 1341 aaKnown RBP35■■■■□ 3.19
NECTIN2-202ENST00000252485 POLA1P09884 1462 aaPredicted RBP34.91■■■■□ 3.18
NECTIN2-202ENST00000252485 RAPGEF2Q9Y4G8 1499 aa34.89■■■■□ 3.18
NECTIN2-202ENST00000252485 MRC2Q9UBG0 1479 aa34.87■■■■□ 3.17
NECTIN2-202ENST00000252485 ZNF316A6NFI3 1004 aaPredicted RBP34.85■■■■□ 3.17
NECTIN2-202ENST00000252485 CENPBP07199 599 aaPredicted RBP34.85■■■■□ 3.17
NECTIN2-202ENST00000252485 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
NECTIN2-202ENST00000252485 ERCC6Q03468 1493 aa34.81■■■■□ 3.16
NECTIN2-202ENST00000252485 RAD54L2Q9Y4B4 1467 aa34.81■■■■□ 3.16
NECTIN2-202ENST00000252485 NEUROD1Q13562 356 aa34.79■■■■□ 3.16
NECTIN2-202ENST00000252485 ERICH3Q5RHP9 1530 aa34.77■■■■□ 3.16
NECTIN2-202ENST00000252485 CUX2O14529 1486 aa34.77■■■■□ 3.16
NECTIN2-202ENST00000252485 APLP2Q06481 763 aa34.76■■■■□ 3.16
NECTIN2-202ENST00000252485 ABCA10Q8WWZ4 1543 aa34.72■■■■□ 3.15
NECTIN2-202ENST00000252485 WDR62O43379 1518 aa34.7■■■■□ 3.15
NECTIN2-202ENST00000252485 PRXQ9BXM0 1461 aa34.67■■■■□ 3.14
NECTIN2-202ENST00000252485 HNRNPUL2Q1KMD3 747 aaKnown RBP34.64■■■■□ 3.14
NECTIN2-202ENST00000252485 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
NECTIN2-202ENST00000252485 IGF1RP08069 1367 aa34.59■■■■□ 3.13
NECTIN2-202ENST00000252485 WDR97A6NE52 1622 aa34.57■■■■□ 3.13
NECTIN2-202ENST00000252485 TARBP1Q13395 1621 aaKnown RBP34.56■■■■□ 3.12
NECTIN2-202ENST00000252485 CLSPNQ9HAW4 1339 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms