RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
ARHGEF28-203ENST00000426542 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
ARHGEF28-203ENST00000426542 EHMT2Q96KQ7 1210 aa28.83■■■□□ 2.21
ARHGEF28-203ENST00000426542 SHROOM4Q9ULL8 1493 aa28.79■■■□□ 2.2
ARHGEF28-203ENST00000426542 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
ARHGEF28-203ENST00000426542 PELP1Q8IZL8 1130 aaKnown RBP28.46■■■□□ 2.15
ARHGEF28-203ENST00000426542 APLP2Q06481 763 aa28.24■■■□□ 2.11
ARHGEF28-203ENST00000426542 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
ARHGEF28-203ENST00000426542 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
ARHGEF28-203ENST00000426542 PCGF6Q9BYE7 350 aa27.56■■■□□ 2
ARHGEF28-203ENST00000426542 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
ARHGEF28-203ENST00000426542 ERICH6Q7L0X2 663 aa27.43■■□□□ 1.98
ARHGEF28-203ENST00000426542 ATP1B4Q9UN42 357 aaPredicted RBP27.33■■□□□ 1.97
ARHGEF28-203ENST00000426542 CENPBP07199 599 aaPredicted RBP27.28■■□□□ 1.96
ARHGEF28-203ENST00000426542 CCER1Q8TC90 406 aaPredicted RBP27.23■■□□□ 1.95
ARHGEF28-203ENST00000426542 TRIM41Q8WV44 630 aa27.17■■□□□ 1.94
ARHGEF28-203ENST00000426542 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
ARHGEF28-203ENST00000426542 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
ARHGEF28-203ENST00000426542 NEFLP07196 543 aa26.86■■□□□ 1.89
ARHGEF28-203ENST00000426542 YTHDC1Q96MU7 727 aaKnown RBP26.84■■□□□ 1.89
ARHGEF28-203ENST00000426542 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
ARHGEF28-203ENST00000426542 MYT1LQ9UL68 1186 aa26.37■■□□□ 1.81
ARHGEF28-203ENST00000426542 POLR3GLQ9BT43 218 aa26.33■■□□□ 1.81
ARHGEF28-203ENST00000426542 ITGAEP38570 1179 aa26.31■■□□□ 1.8
ARHGEF28-203ENST00000426542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.28■■□□□ 1.8
ARHGEF28-203ENST00000426542 HNRNPUL2Q1KMD3 747 aaKnown RBP26.28■■□□□ 1.8
ARHGEF28-203ENST00000426542 TRIM26Q12899 539 aaPredicted RBP26.25■■□□□ 1.79
ARHGEF28-203ENST00000426542 DAXXQ9UER7 740 aaPredicted RBP26.23■■□□□ 1.79
ARHGEF28-203ENST00000426542 MYT1Q01538 1121 aa26.2■■□□□ 1.78
ARHGEF28-203ENST00000426542 CNGB1Q14028 1251 aaPredicted RBP26.09■■□□□ 1.77
ARHGEF28-203ENST00000426542 HRCP23327 699 aa25.99■■□□□ 1.75
ARHGEF28-203ENST00000426542 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
ARHGEF28-203ENST00000426542 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
ARHGEF28-203ENST00000426542 SLC4A1APQ9BWU0 796 aaKnown RBP25.89■■□□□ 1.74
ARHGEF28-203ENST00000426542 CLSPNQ9HAW4 1339 aa25.64■■□□□ 1.69
ARHGEF28-203ENST00000426542 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
ARHGEF28-203ENST00000426542 FAM50AQ14320 339 aaKnown RBP25.56■■□□□ 1.68
ARHGEF28-203ENST00000426542 RTL5Q5HYW3 569 aaPredicted RBP25.51■■□□□ 1.68
ARHGEF28-203ENST00000426542 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
ARHGEF28-203ENST00000426542 TRIM52Q96A61 297 aa25.49■■□□□ 1.67
ARHGEF28-203ENST00000426542 NEUROD1Q13562 356 aa25.39■■□□□ 1.66
ARHGEF28-203ENST00000426542 ZNF326Q5BKZ1 582 aaKnown RBP25.25■■□□□ 1.63
ARHGEF28-203ENST00000426542 BCANQ96GW7 911 aa25.24■■□□□ 1.63
ARHGEF28-203ENST00000426542 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
ARHGEF28-203ENST00000426542 ZBTB47Q9UFB7 747 aaPredicted RBP25.14■■□□□ 1.62
ARHGEF28-203ENST00000426542 ANP32CO43423 234 aa25.14■■□□□ 1.62
ARHGEF28-203ENST00000426542 SLC24A1O60721 1099 aa25.06■■□□□ 1.6
ARHGEF28-203ENST00000426542 FBLN2P98095 1184 aa25.06■■□□□ 1.6
ARHGEF28-203ENST00000426542 BCL11AQ9H165 835 aa25.04■■□□□ 1.6
ARHGEF28-203ENST00000426542 CDK11AQ9UQ88 783 aaPredicted RBP25.03■■□□□ 1.6
ARHGEF28-203ENST00000426542 CANXP27824 592 aaKnown RBP25■■□□□ 1.59
ARHGEF28-203ENST00000426542 GTF3C3Q9Y5Q9 886 aa24.99■■□□□ 1.59
ARHGEF28-203ENST00000426542 ABCC9O60706 1549 aa24.97■■□□□ 1.59
ARHGEF28-203ENST00000426542 ARID3CA6NKF2 412 aa24.86■■□□□ 1.57
ARHGEF28-203ENST00000426542 NEFMP07197 916 aa24.86■■□□□ 1.57
ARHGEF28-203ENST00000426542 P3H3Q8IVL6 736 aa24.82■■□□□ 1.56
ARHGEF28-203ENST00000426542 ZNF777Q9ULD5 760 aaPredicted RBP24.72■■□□□ 1.55
ARHGEF28-203ENST00000426542 ANP32AP39687 249 aaKnown RBP24.64■■□□□ 1.53
ARHGEF28-203ENST00000426542 NPM2Q86SE8 214 aaKnown RBP24.62■■□□□ 1.53
ARHGEF28-203ENST00000426542 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
ARHGEF28-203ENST00000426542 ACIN1Q9UKV3 1341 aaKnown RBP24.49■■□□□ 1.51
ARHGEF28-203ENST00000426542 ESF1Q9H501 851 aaKnown RBP24.49■■□□□ 1.51
ARHGEF28-203ENST00000426542 CHGAP10645 457 aaKnown RBP24.48■■□□□ 1.51
ARHGEF28-203ENST00000426542 STAG3Q9UJ98 1225 aa24.44■■□□□ 1.5
ARHGEF28-203ENST00000426542 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
ARHGEF28-203ENST00000426542 HSP90AA1P07900 732 aaKnown RBP24.39■■□□□ 1.5
ARHGEF28-203ENST00000426542 TONSLQ96HA7 1378 aa24.38■■□□□ 1.49
ARHGEF28-203ENST00000426542 FKBP8Q14318 412 aa24.38■■□□□ 1.49
ARHGEF28-203ENST00000426542 ANP32BQ92688 251 aaKnown RBP24.35■■□□□ 1.49
ARHGEF28-203ENST00000426542 FAM9BQ8IZU0 186 aa24.33■■□□□ 1.48
ARHGEF28-203ENST00000426542 HNRNPUQ00839 825 aaKnown RBP eCLIP24.31■■□□□ 1.48
ARHGEF28-203ENST00000426542 SALL2Q9Y467 1007 aaPredicted RBP24.3■■□□□ 1.48
ARHGEF28-203ENST00000426542 UPF2Q9HAU5 1272 aaKnown RBP24.29■■□□□ 1.48
ARHGEF28-203ENST00000426542 DDX10Q13206 875 aaKnown RBP24.24■■□□□ 1.47
ARHGEF28-203ENST00000426542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.21■■□□□ 1.471e-6■■□□□ 13.1
ARHGEF28-203ENST00000426542 EIF5BO60841 1220 aaKnown RBP24.19■■□□□ 1.46
ARHGEF28-203ENST00000426542 NPM1P06748 294 aaKnown RBP eCLIP24.19■■□□□ 1.46
ARHGEF28-203ENST00000426542 CHIC2Q9UKJ5 165 aa24.18■■□□□ 1.46
ARHGEF28-203ENST00000426542 TMC1Q8TDI8 760 aa24.14■■□□□ 1.45
ARHGEF28-203ENST00000426542 WDR43Q15061 677 aaKnown RBP eCLIP24.1■■□□□ 1.45
ARHGEF28-203ENST00000426542 CCDC136Q96JN2 1154 aa24.09■■□□□ 1.45
ARHGEF28-203ENST00000426542 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.45
ARHGEF28-203ENST00000426542 KDM2AQ9Y2K7 1162 aa24.06■■□□□ 1.44
ARHGEF28-203ENST00000426542 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
ARHGEF28-203ENST00000426542 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
ARHGEF28-203ENST00000426542 NBR1Q14596 966 aa24.01■■□□□ 1.43
ARHGEF28-203ENST00000426542 ARXQ96QS3 562 aa24.01■■□□□ 1.43
ARHGEF28-203ENST00000426542 MRS2Q9HD23 443 aa23.98■■□□□ 1.43
ARHGEF28-203ENST00000426542 TSPY4P0CV99 314 aa23.95■■□□□ 1.42
ARHGEF28-203ENST00000426542 TSPY10P0CW01 314 aa23.95■■□□□ 1.42
ARHGEF28-203ENST00000426542 A0A0G2JS52 829 aa23.91■■□□□ 1.42
ARHGEF28-203ENST00000426542 IRX6P78412 446 aaPredicted RBP23.9■■□□□ 1.42
ARHGEF28-203ENST00000426542 MYH16Q9H6N6 1097 aa23.89■■□□□ 1.42
ARHGEF28-203ENST00000426542 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
ARHGEF28-203ENST00000426542 ZBTB7CA1YPR0 619 aa23.88■■□□□ 1.41
ARHGEF28-203ENST00000426542 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
ARHGEF28-203ENST00000426542 HIRIP3Q9BW71 556 aaPredicted RBP23.87■■□□□ 1.41
ARHGEF28-203ENST00000426542 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
ARHGEF28-203ENST00000426542 PLEKHG5O94827 1062 aa23.85■■□□□ 1.41
ARHGEF28-203ENST00000426542 C14orf37Q86TY3 774 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms