RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
ARHGEF28-214ENST00000545377 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
ARHGEF28-214ENST00000545377 EHMT2Q96KQ7 1210 aa28.32■■■□□ 2.12
ARHGEF28-214ENST00000545377 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
ARHGEF28-214ENST00000545377 APLP2Q06481 763 aa27.55■■■□□ 2
ARHGEF28-214ENST00000545377 FAM9AQ8IZU1 332 aaPredicted RBP27.51■■■□□ 2
ARHGEF28-214ENST00000545377 PELP1Q8IZL8 1130 aaKnown RBP27.31■■□□□ 1.96
ARHGEF28-214ENST00000545377 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.95
ARHGEF28-214ENST00000545377 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
ARHGEF28-214ENST00000545377 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
ARHGEF28-214ENST00000545377 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
ARHGEF28-214ENST00000545377 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
ARHGEF28-214ENST00000545377 ERICH6Q7L0X2 663 aa26.47■■□□□ 1.83
ARHGEF28-214ENST00000545377 MYT1LQ9UL68 1186 aa26.36■■□□□ 1.81
ARHGEF28-214ENST00000545377 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
ARHGEF28-214ENST00000545377 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
ARHGEF28-214ENST00000545377 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
ARHGEF28-214ENST00000545377 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
ARHGEF28-214ENST00000545377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
ARHGEF28-214ENST00000545377 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
ARHGEF28-214ENST00000545377 CENPBP07199 599 aaPredicted RBP25.91■■□□□ 1.74
ARHGEF28-214ENST00000545377 POLR3GLQ9BT43 218 aa25.87■■□□□ 1.73
ARHGEF28-214ENST00000545377 NEFLP07196 543 aa25.84■■□□□ 1.73
ARHGEF28-214ENST00000545377 YTHDC1Q96MU7 727 aaKnown RBP25.81■■□□□ 1.72
ARHGEF28-214ENST00000545377 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
ARHGEF28-214ENST00000545377 ITGAEP38570 1179 aa25.68■■□□□ 1.7
ARHGEF28-214ENST00000545377 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
ARHGEF28-214ENST00000545377 CNGB1Q14028 1251 aaPredicted RBP25.67■■□□□ 1.7
ARHGEF28-214ENST00000545377 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
ARHGEF28-214ENST00000545377 DAXXQ9UER7 740 aaPredicted RBP25.45■■□□□ 1.66
ARHGEF28-214ENST00000545377 MYT1Q01538 1121 aa25.26■■□□□ 1.63
ARHGEF28-214ENST00000545377 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
ARHGEF28-214ENST00000545377 SLC24A1O60721 1099 aa24.96■■□□□ 1.59
ARHGEF28-214ENST00000545377 FBLN2P98095 1184 aa24.91■■□□□ 1.58
ARHGEF28-214ENST00000545377 BCANQ96GW7 911 aa24.91■■□□□ 1.58
ARHGEF28-214ENST00000545377 TRIM52Q96A61 297 aa24.87■■□□□ 1.57
ARHGEF28-214ENST00000545377 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
ARHGEF28-214ENST00000545377 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
ARHGEF28-214ENST00000545377 BCL11AQ9H165 835 aa24.77■■□□□ 1.56
ARHGEF28-214ENST00000545377 TRIM26Q12899 539 aaPredicted RBP24.75■■□□□ 1.55
ARHGEF28-214ENST00000545377 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
ARHGEF28-214ENST00000545377 ZNF326Q5BKZ1 582 aaKnown RBP24.72■■□□□ 1.55
ARHGEF28-214ENST00000545377 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
ARHGEF28-214ENST00000545377 LOC105371045A0A1W2PR82 267 aa24.65■■□□□ 1.54
ARHGEF28-214ENST00000545377 ZBTB47Q9UFB7 747 aaPredicted RBP24.63■■□□□ 1.53
ARHGEF28-214ENST00000545377 NEUROD1Q13562 356 aa24.6■■□□□ 1.53
ARHGEF28-214ENST00000545377 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
ARHGEF28-214ENST00000545377 HRCP23327 699 aa24.45■■□□□ 1.51
ARHGEF28-214ENST00000545377 RTL5Q5HYW3 569 aaPredicted RBP24.44■■□□□ 1.5
ARHGEF28-214ENST00000545377 ESF1Q9H501 851 aaKnown RBP24.43■■□□□ 1.5
ARHGEF28-214ENST00000545377 NEFMP07197 916 aa24.38■■□□□ 1.49
ARHGEF28-214ENST00000545377 ABCC9O60706 1549 aa24.38■■□□□ 1.49
ARHGEF28-214ENST00000545377 CANXP27824 592 aaKnown RBP24.37■■□□□ 1.49
ARHGEF28-214ENST00000545377 ZNF777Q9ULD5 760 aaPredicted RBP24.27■■□□□ 1.48
ARHGEF28-214ENST00000545377 STAG3Q9UJ98 1225 aa24.25■■□□□ 1.47
ARHGEF28-214ENST00000545377 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
ARHGEF28-214ENST00000545377 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
ARHGEF28-214ENST00000545377 ANP32CO43423 234 aa24.11■■□□□ 1.45
ARHGEF28-214ENST00000545377 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
ARHGEF28-214ENST00000545377 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
ARHGEF28-214ENST00000545377 A0A0G2JS52 829 aa24.07■■□□□ 1.44
ARHGEF28-214ENST00000545377 NPM1P06748 294 aaKnown RBP eCLIP24.04■■□□□ 1.44
ARHGEF28-214ENST00000545377 PLEKHG5O94827 1062 aa23.92■■□□□ 1.42
ARHGEF28-214ENST00000545377 CDK11AQ9UQ88 783 aaPredicted RBP23.86■■□□□ 1.41
ARHGEF28-214ENST00000545377 ZBTB7CA1YPR0 619 aa23.81■■□□□ 1.4
ARHGEF28-214ENST00000545377 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
ARHGEF28-214ENST00000545377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.77■■□□□ 1.41e-6■■□□□ 13.1
ARHGEF28-214ENST00000545377 NPM2Q86SE8 214 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-214ENST00000545377 HSP90AA1P07900 732 aaKnown RBP23.68■■□□□ 1.38
ARHGEF28-214ENST00000545377 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
ARHGEF28-214ENST00000545377 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
ARHGEF28-214ENST00000545377 HAP1P54257 671 aaPredicted RBP23.55■■□□□ 1.36
ARHGEF28-214ENST00000545377 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
ARHGEF28-214ENST00000545377 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
ARHGEF28-214ENST00000545377 ANP32BQ92688 251 aaKnown RBP23.48■■□□□ 1.35
ARHGEF28-214ENST00000545377 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
ARHGEF28-214ENST00000545377 PPP1R15AO75807 674 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-214ENST00000545377 ARID4BQ4LE39 1312 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-214ENST00000545377 ARXQ96QS3 562 aa23.45■■□□□ 1.34
ARHGEF28-214ENST00000545377 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.34
ARHGEF28-214ENST00000545377 FAM9BQ8IZU0 186 aa23.42■■□□□ 1.34
ARHGEF28-214ENST00000545377 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
ARHGEF28-214ENST00000545377 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
ARHGEF28-214ENST00000545377 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
ARHGEF28-214ENST00000545377 CDK11BP21127 795 aaKnown RBP23.4■■□□□ 1.34
ARHGEF28-214ENST00000545377 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF28-214ENST00000545377 KCNH8Q96L42 1107 aa23.36■■□□□ 1.33
ARHGEF28-214ENST00000545377 WDR43Q15061 677 aaKnown RBP eCLIP23.34■■□□□ 1.33
ARHGEF28-214ENST00000545377 TSPY4P0CV99 314 aa23.32■■□□□ 1.32
ARHGEF28-214ENST00000545377 TSPY10P0CW01 314 aa23.32■■□□□ 1.32
ARHGEF28-214ENST00000545377 TULP1O00294 542 aaPredicted RBP23.32■■□□□ 1.32
ARHGEF28-214ENST00000545377 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.31
ARHGEF28-214ENST00000545377 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
ARHGEF28-214ENST00000545377 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
ARHGEF28-214ENST00000545377 LMOD2Q6P5Q4 547 aa23.23■■□□□ 1.31
ARHGEF28-214ENST00000545377 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
ARHGEF28-214ENST00000545377 NPHP1O15259 732 aa23.22■■□□□ 1.31
ARHGEF28-214ENST00000545377 DDX10Q13206 875 aaKnown RBP23.18■■□□□ 1.3
ARHGEF28-214ENST00000545377 FKBP8Q14318 412 aa23.17■■□□□ 1.3
ARHGEF28-214ENST00000545377 TRHP20396 242 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms