RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
ARHGEF28-214ENST00000545377 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
ARHGEF28-214ENST00000545377 EHMT2Q96KQ7 1210 aa28.32■■■□□ 2.12
ARHGEF28-214ENST00000545377 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
ARHGEF28-214ENST00000545377 APLP2Q06481 763 aa27.55■■■□□ 2
ARHGEF28-214ENST00000545377 FAM9AQ8IZU1 332 aaPredicted RBP27.51■■■□□ 2
ARHGEF28-214ENST00000545377 PELP1Q8IZL8 1130 aaKnown RBP27.31■■□□□ 1.96
ARHGEF28-214ENST00000545377 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.95
ARHGEF28-214ENST00000545377 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
ARHGEF28-214ENST00000545377 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
ARHGEF28-214ENST00000545377 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
ARHGEF28-214ENST00000545377 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
ARHGEF28-214ENST00000545377 ERICH6Q7L0X2 663 aa26.47■■□□□ 1.83
ARHGEF28-214ENST00000545377 MYT1LQ9UL68 1186 aa26.36■■□□□ 1.81
ARHGEF28-214ENST00000545377 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
ARHGEF28-214ENST00000545377 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
ARHGEF28-214ENST00000545377 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
ARHGEF28-214ENST00000545377 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
ARHGEF28-214ENST00000545377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
ARHGEF28-214ENST00000545377 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
ARHGEF28-214ENST00000545377 CENPBP07199 599 aaPredicted RBP25.91■■□□□ 1.74
ARHGEF28-214ENST00000545377 POLR3GLQ9BT43 218 aa25.87■■□□□ 1.73
ARHGEF28-214ENST00000545377 NEFLP07196 543 aa25.84■■□□□ 1.73
ARHGEF28-214ENST00000545377 YTHDC1Q96MU7 727 aaKnown RBP25.81■■□□□ 1.72
ARHGEF28-214ENST00000545377 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
ARHGEF28-214ENST00000545377 ITGAEP38570 1179 aa25.68■■□□□ 1.7
ARHGEF28-214ENST00000545377 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
ARHGEF28-214ENST00000545377 CNGB1Q14028 1251 aaPredicted RBP25.67■■□□□ 1.7
ARHGEF28-214ENST00000545377 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
ARHGEF28-214ENST00000545377 DAXXQ9UER7 740 aaPredicted RBP25.45■■□□□ 1.66
ARHGEF28-214ENST00000545377 MYT1Q01538 1121 aa25.26■■□□□ 1.63
ARHGEF28-214ENST00000545377 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
ARHGEF28-214ENST00000545377 SLC24A1O60721 1099 aa24.96■■□□□ 1.59
ARHGEF28-214ENST00000545377 FBLN2P98095 1184 aa24.91■■□□□ 1.58
ARHGEF28-214ENST00000545377 BCANQ96GW7 911 aa24.91■■□□□ 1.58
ARHGEF28-214ENST00000545377 TRIM52Q96A61 297 aa24.87■■□□□ 1.57
ARHGEF28-214ENST00000545377 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
ARHGEF28-214ENST00000545377 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
ARHGEF28-214ENST00000545377 BCL11AQ9H165 835 aa24.77■■□□□ 1.56
ARHGEF28-214ENST00000545377 TRIM26Q12899 539 aaPredicted RBP24.75■■□□□ 1.55
ARHGEF28-214ENST00000545377 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
ARHGEF28-214ENST00000545377 ZNF326Q5BKZ1 582 aaKnown RBP24.72■■□□□ 1.55
ARHGEF28-214ENST00000545377 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
ARHGEF28-214ENST00000545377 LOC105371045A0A1W2PR82 267 aa24.65■■□□□ 1.54
ARHGEF28-214ENST00000545377 ZBTB47Q9UFB7 747 aaPredicted RBP24.63■■□□□ 1.53
ARHGEF28-214ENST00000545377 NEUROD1Q13562 356 aa24.6■■□□□ 1.53
ARHGEF28-214ENST00000545377 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
ARHGEF28-214ENST00000545377 HRCP23327 699 aa24.45■■□□□ 1.51
ARHGEF28-214ENST00000545377 RTL5Q5HYW3 569 aaPredicted RBP24.44■■□□□ 1.5
ARHGEF28-214ENST00000545377 ESF1Q9H501 851 aaKnown RBP24.43■■□□□ 1.5
ARHGEF28-214ENST00000545377 NEFMP07197 916 aa24.38■■□□□ 1.49
ARHGEF28-214ENST00000545377 ABCC9O60706 1549 aa24.38■■□□□ 1.49
ARHGEF28-214ENST00000545377 CANXP27824 592 aaKnown RBP24.37■■□□□ 1.49
ARHGEF28-214ENST00000545377 ZNF777Q9ULD5 760 aaPredicted RBP24.27■■□□□ 1.48
ARHGEF28-214ENST00000545377 STAG3Q9UJ98 1225 aa24.25■■□□□ 1.47
ARHGEF28-214ENST00000545377 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
ARHGEF28-214ENST00000545377 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
ARHGEF28-214ENST00000545377 ANP32CO43423 234 aa24.11■■□□□ 1.45
ARHGEF28-214ENST00000545377 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
ARHGEF28-214ENST00000545377 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
ARHGEF28-214ENST00000545377 A0A0G2JS52 829 aa24.07■■□□□ 1.44
ARHGEF28-214ENST00000545377 NPM1P06748 294 aaKnown RBP eCLIP24.04■■□□□ 1.44
ARHGEF28-214ENST00000545377 PLEKHG5O94827 1062 aa23.92■■□□□ 1.42
ARHGEF28-214ENST00000545377 CDK11AQ9UQ88 783 aaPredicted RBP23.86■■□□□ 1.41
ARHGEF28-214ENST00000545377 ZBTB7CA1YPR0 619 aa23.81■■□□□ 1.4
ARHGEF28-214ENST00000545377 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
ARHGEF28-214ENST00000545377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.77■■□□□ 1.41e-6■■□□□ 13.1
ARHGEF28-214ENST00000545377 NPM2Q86SE8 214 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-214ENST00000545377 HSP90AA1P07900 732 aaKnown RBP23.68■■□□□ 1.38
ARHGEF28-214ENST00000545377 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
ARHGEF28-214ENST00000545377 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
ARHGEF28-214ENST00000545377 HAP1P54257 671 aaPredicted RBP23.55■■□□□ 1.36
ARHGEF28-214ENST00000545377 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
ARHGEF28-214ENST00000545377 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
ARHGEF28-214ENST00000545377 ANP32BQ92688 251 aaKnown RBP23.48■■□□□ 1.35
ARHGEF28-214ENST00000545377 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
ARHGEF28-214ENST00000545377 PPP1R15AO75807 674 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-214ENST00000545377 ARID4BQ4LE39 1312 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-214ENST00000545377 ARXQ96QS3 562 aa23.45■■□□□ 1.34
ARHGEF28-214ENST00000545377 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.34
ARHGEF28-214ENST00000545377 FAM9BQ8IZU0 186 aa23.42■■□□□ 1.34
ARHGEF28-214ENST00000545377 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
ARHGEF28-214ENST00000545377 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
ARHGEF28-214ENST00000545377 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
ARHGEF28-214ENST00000545377 CDK11BP21127 795 aaKnown RBP23.4■■□□□ 1.34
ARHGEF28-214ENST00000545377 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF28-214ENST00000545377 KCNH8Q96L42 1107 aa23.36■■□□□ 1.33
ARHGEF28-214ENST00000545377 WDR43Q15061 677 aaKnown RBP eCLIP23.34■■□□□ 1.33
ARHGEF28-214ENST00000545377 TSPY4P0CV99 314 aa23.32■■□□□ 1.32
ARHGEF28-214ENST00000545377 TSPY10P0CW01 314 aa23.32■■□□□ 1.32
ARHGEF28-214ENST00000545377 TULP1O00294 542 aaPredicted RBP23.32■■□□□ 1.32
ARHGEF28-214ENST00000545377 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.31
ARHGEF28-214ENST00000545377 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
ARHGEF28-214ENST00000545377 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
ARHGEF28-214ENST00000545377 LMOD2Q6P5Q4 547 aa23.23■■□□□ 1.31
ARHGEF28-214ENST00000545377 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
ARHGEF28-214ENST00000545377 NPHP1O15259 732 aa23.22■■□□□ 1.31
ARHGEF28-214ENST00000545377 DDX10Q13206 875 aaKnown RBP23.18■■□□□ 1.3
ARHGEF28-214ENST00000545377 FKBP8Q14318 412 aa23.17■■□□□ 1.3
ARHGEF28-214ENST00000545377 TRHP20396 242 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms