RNA–Protein interactions for RNA: ENST00000550367.1

TUBA1B-206, Transcript of tubulin alpha 1b, humanhuman

TSL 3

Gene TUBA1B, Length 835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-206ENST00000550367 NISCHQ9Y2I1 1504 aa24.5■■□□□ 1.51
TUBA1B-206ENST00000550367 ABCC9O60706 1549 aa22.52■■□□□ 1.19
TUBA1B-206ENST00000550367 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
TUBA1B-206ENST00000550367 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
TUBA1B-206ENST00000550367 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
TUBA1B-206ENST00000550367 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
TUBA1B-206ENST00000550367 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
TUBA1B-206ENST00000550367 NACADO15069 1562 aa20.93■□□□□ 0.94
TUBA1B-206ENST00000550367 UNC13AQ9UPW8 1703 aa20.74■□□□□ 0.91
TUBA1B-206ENST00000550367 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
TUBA1B-206ENST00000550367 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
TUBA1B-206ENST00000550367 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
TUBA1B-206ENST00000550367 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
TUBA1B-206ENST00000550367 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
TUBA1B-206ENST00000550367 SCRIBQ14160 1630 aa20.18■□□□□ 0.82
TUBA1B-206ENST00000550367 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
TUBA1B-206ENST00000550367 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
TUBA1B-206ENST00000550367 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
TUBA1B-206ENST00000550367 DNAJC5Q9H3Z4 198 aa19.86■□□□□ 0.77
TUBA1B-206ENST00000550367 CUX2O14529 1486 aa19.41■□□□□ 0.7
TUBA1B-206ENST00000550367 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
TUBA1B-206ENST00000550367 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
TUBA1B-206ENST00000550367 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
TUBA1B-206ENST00000550367 NESP48681 1621 aa19.26■□□□□ 0.67
TUBA1B-206ENST00000550367 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
TUBA1B-206ENST00000550367 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
TUBA1B-206ENST00000550367 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
TUBA1B-206ENST00000550367 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
TUBA1B-206ENST00000550367 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
TUBA1B-206ENST00000550367 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
TUBA1B-206ENST00000550367 LAMC3Q9Y6N6 1575 aa18.95■□□□□ 0.62
TUBA1B-206ENST00000550367 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
TUBA1B-206ENST00000550367 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
TUBA1B-206ENST00000550367 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
TUBA1B-206ENST00000550367 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
TUBA1B-206ENST00000550367 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
TUBA1B-206ENST00000550367 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
TUBA1B-206ENST00000550367 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
TUBA1B-206ENST00000550367 WDR62O43379 1518 aa18.7■□□□□ 0.58
TUBA1B-206ENST00000550367 WIZO95785 1651 aa18.68■□□□□ 0.58
TUBA1B-206ENST00000550367 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
TUBA1B-206ENST00000550367 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.56
TUBA1B-206ENST00000550367 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
TUBA1B-206ENST00000550367 CFTRP13569 1480 aa18.49■□□□□ 0.55
TUBA1B-206ENST00000550367 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
TUBA1B-206ENST00000550367 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
TUBA1B-206ENST00000550367 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
TUBA1B-206ENST00000550367 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
TUBA1B-206ENST00000550367 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
TUBA1B-206ENST00000550367 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
TUBA1B-206ENST00000550367 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
TUBA1B-206ENST00000550367 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
TUBA1B-206ENST00000550367 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
TUBA1B-206ENST00000550367 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
TUBA1B-206ENST00000550367 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
TUBA1B-206ENST00000550367 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
TUBA1B-206ENST00000550367 TOPBP1Q92547 1522 aa18.19■□□□□ 0.5
TUBA1B-206ENST00000550367 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
TUBA1B-206ENST00000550367 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.491e-8■■■■■ 35
TUBA1B-206ENST00000550367 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
TUBA1B-206ENST00000550367 FBLN2P98095 1184 aa18.09■□□□□ 0.49
TUBA1B-206ENST00000550367 CHD1O14646 1710 aa18.08■□□□□ 0.48
TUBA1B-206ENST00000550367 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
TUBA1B-206ENST00000550367 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
TUBA1B-206ENST00000550367 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
TUBA1B-206ENST00000550367 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
TUBA1B-206ENST00000550367 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
TUBA1B-206ENST00000550367 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
TUBA1B-206ENST00000550367 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
TUBA1B-206ENST00000550367 SOGA1O94964 1423 aa17.91■□□□□ 0.46
TUBA1B-206ENST00000550367 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
TUBA1B-206ENST00000550367 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
TUBA1B-206ENST00000550367 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
TUBA1B-206ENST00000550367 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
TUBA1B-206ENST00000550367 CUX1P39880 1505 aa17.78■□□□□ 0.44
TUBA1B-206ENST00000550367 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
TUBA1B-206ENST00000550367 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
TUBA1B-206ENST00000550367 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
TUBA1B-206ENST00000550367 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
TUBA1B-206ENST00000550367 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
TUBA1B-206ENST00000550367 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
TUBA1B-206ENST00000550367 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
TUBA1B-206ENST00000550367 PBRM1Q86U86 1689 aa17.66■□□□□ 0.42
TUBA1B-206ENST00000550367 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
TUBA1B-206ENST00000550367 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.41
TUBA1B-206ENST00000550367 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
TUBA1B-206ENST00000550367 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
TUBA1B-206ENST00000550367 CEP170Q5SW79 1584 aa17.52■□□□□ 0.39
TUBA1B-206ENST00000550367 NUP160Q12769 1436 aa17.48■□□□□ 0.39
TUBA1B-206ENST00000550367 ADAMTS12P58397 1594 aa17.48■□□□□ 0.39
TUBA1B-206ENST00000550367 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
TUBA1B-206ENST00000550367 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
TUBA1B-206ENST00000550367 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
TUBA1B-206ENST00000550367 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
TUBA1B-206ENST00000550367 KIF13AQ9H1H9 1805 aa17.4■□□□□ 0.38
TUBA1B-206ENST00000550367 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
TUBA1B-206ENST00000550367 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
TUBA1B-206ENST00000550367 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
TUBA1B-206ENST00000550367 JPH4Q96JJ6 628 aa17.35■□□□□ 0.37
TUBA1B-206ENST00000550367 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms