RNA–Protein interactions for RNA: ENST00000297564.6

COX6C-201, Transcript of cytochrome c oxidase subunit 6C, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COX6C, Length 433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6C-201ENST00000297564 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
COX6C-201ENST00000297564 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
COX6C-201ENST00000297564 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
COX6C-201ENST00000297564 ABCC9O60706 1549 aa17.53■□□□□ 0.4
COX6C-201ENST00000297564 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
COX6C-201ENST00000297564 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
COX6C-201ENST00000297564 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
COX6C-201ENST00000297564 NACADO15069 1562 aa17.26■□□□□ 0.35
COX6C-201ENST00000297564 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
COX6C-201ENST00000297564 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
COX6C-201ENST00000297564 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
COX6C-201ENST00000297564 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
COX6C-201ENST00000297564 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
COX6C-201ENST00000297564 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
COX6C-201ENST00000297564 CECR2Q9BXF3 1484 aa16.23■□□□□ 0.19
COX6C-201ENST00000297564 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
COX6C-201ENST00000297564 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
COX6C-201ENST00000297564 MROH2BQ7Z745 1585 aa16.12■□□□□ 0.17
COX6C-201ENST00000297564 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
COX6C-201ENST00000297564 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
COX6C-201ENST00000297564 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
COX6C-201ENST00000297564 PEG3Q9GZU2 1588 aa16.03■□□□□ 0.16
COX6C-201ENST00000297564 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
COX6C-201ENST00000297564 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
COX6C-201ENST00000297564 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
COX6C-201ENST00000297564 WIZO95785 1651 aa15.9■□□□□ 0.14
COX6C-201ENST00000297564 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
COX6C-201ENST00000297564 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
COX6C-201ENST00000297564 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
COX6C-201ENST00000297564 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
COX6C-201ENST00000297564 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
COX6C-201ENST00000297564 CCDC88BA6NC98 1476 aa15.68■□□□□ 0.1
COX6C-201ENST00000297564 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
COX6C-201ENST00000297564 CFTRP13569 1480 aa15.5■□□□□ 0.07
COX6C-201ENST00000297564 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
COX6C-201ENST00000297564 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
COX6C-201ENST00000297564 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
COX6C-201ENST00000297564 NESP48681 1621 aa15.28■□□□□ 0.04
COX6C-201ENST00000297564 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
COX6C-201ENST00000297564 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
COX6C-201ENST00000297564 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
COX6C-201ENST00000297564 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
COX6C-201ENST00000297564 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
COX6C-201ENST00000297564 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
COX6C-201ENST00000297564 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
COX6C-201ENST00000297564 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
COX6C-201ENST00000297564 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
COX6C-201ENST00000297564 CUX1P39880 1505 aa15.08■□□□□ 0.01
COX6C-201ENST00000297564 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
COX6C-201ENST00000297564 TOPBP1Q92547 1522 aa15.07■□□□□ 0
COX6C-201ENST00000297564 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
COX6C-201ENST00000297564 SYNJ1O43426 1573 aa15.06■□□□□ 0
COX6C-201ENST00000297564 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
COX6C-201ENST00000297564 KIF21AQ7Z4S6 1674 aa15.04■□□□□ -0
COX6C-201ENST00000297564 WDR62O43379 1518 aa15.02□□□□□ -0.01
COX6C-201ENST00000297564 AEBP2Q6ZN18 517 aaPredicted RBP15□□□□□ -0.01
COX6C-201ENST00000297564 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
COX6C-201ENST00000297564 SOGA1O94964 1423 aa14.97□□□□□ -0.01
COX6C-201ENST00000297564 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
COX6C-201ENST00000297564 EEA1Q15075 1411 aa14.96□□□□□ -0.01
COX6C-201ENST00000297564 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
COX6C-201ENST00000297564 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
COX6C-201ENST00000297564 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
COX6C-201ENST00000297564 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
COX6C-201ENST00000297564 CUX2O14529 1486 aa14.89□□□□□ -0.03
COX6C-201ENST00000297564 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
COX6C-201ENST00000297564 RAD54L2Q9Y4B4 1467 aa14.87□□□□□ -0.03
COX6C-201ENST00000297564 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
COX6C-201ENST00000297564 TARBP1Q13395 1621 aaKnown RBP14.83□□□□□ -0.04
COX6C-201ENST00000297564 IGF1RP08069 1367 aa14.8□□□□□ -0.04
COX6C-201ENST00000297564 RUSC2Q8N2Y8 1516 aa14.8□□□□□ -0.04
COX6C-201ENST00000297564 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
COX6C-201ENST00000297564 GAPVD1Q14C86 1478 aa14.77□□□□□ -0.04
COX6C-201ENST00000297564 FAM9AQ8IZU1 332 aaPredicted RBP14.77□□□□□ -0.05
COX6C-201ENST00000297564 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
COX6C-201ENST00000297564 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
COX6C-201ENST00000297564 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
COX6C-201ENST00000297564 GRIN2BQ13224 1484 aa14.73□□□□□ -0.05
COX6C-201ENST00000297564 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
COX6C-201ENST00000297564 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.05
COX6C-201ENST00000297564 CARMIL1Q5VZK9 1371 aa14.71□□□□□ -0.06
COX6C-201ENST00000297564 FHAD1B1AJZ9 1412 aa14.66□□□□□ -0.06
COX6C-201ENST00000297564 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
COX6C-201ENST00000297564 KIF21BO75037 1637 aa14.65□□□□□ -0.06
COX6C-201ENST00000297564 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
COX6C-201ENST00000297564 EIF4G3O43432 1585 aaKnown RBP14.64□□□□□ -0.07
COX6C-201ENST00000297564 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
COX6C-201ENST00000297564 CUL7Q14999 1698 aa14.63□□□□□ -0.07
COX6C-201ENST00000297564 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
COX6C-201ENST00000297564 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
COX6C-201ENST00000297564 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
COX6C-201ENST00000297564 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
COX6C-201ENST00000297564 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
COX6C-201ENST00000297564 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
COX6C-201ENST00000297564 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
COX6C-201ENST00000297564 ADAMTS12P58397 1594 aa14.55□□□□□ -0.08
COX6C-201ENST00000297564 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
COX6C-201ENST00000297564 FBLN2P98095 1184 aa14.47□□□□□ -0.09
COX6C-201ENST00000297564 NUP160Q12769 1436 aa14.46□□□□□ -0.09
COX6C-201ENST00000297564 KIAA0586Q9BVV6 1533 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms