RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
ARHGEF28-201ENST00000296794 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
ARHGEF28-201ENST00000296794 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
ARHGEF28-201ENST00000296794 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
ARHGEF28-201ENST00000296794 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
ARHGEF28-201ENST00000296794 PCGF6Q9BYE7 350 aa25.25■■□□□ 1.63
ARHGEF28-201ENST00000296794 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
ARHGEF28-201ENST00000296794 APLP2Q06481 763 aa25.03■■□□□ 1.6
ARHGEF28-201ENST00000296794 PELP1Q8IZL8 1130 aaKnown RBP24.95■■□□□ 1.58
ARHGEF28-201ENST00000296794 TTBK1Q5TCY1 1321 aaPredicted RBP24.76■■□□□ 1.55
ARHGEF28-201ENST00000296794 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
ARHGEF28-201ENST00000296794 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
ARHGEF28-201ENST00000296794 CENPBP07199 599 aaPredicted RBP24.52■■□□□ 1.52
ARHGEF28-201ENST00000296794 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
ARHGEF28-201ENST00000296794 RANGAP1P46060 587 aaPredicted RBP24.39■■□□□ 1.5
ARHGEF28-201ENST00000296794 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
ARHGEF28-201ENST00000296794 HRCP23327 699 aa24.28■■□□□ 1.48
ARHGEF28-201ENST00000296794 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
ARHGEF28-201ENST00000296794 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
ARHGEF28-201ENST00000296794 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
ARHGEF28-201ENST00000296794 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
ARHGEF28-201ENST00000296794 YTHDC1Q96MU7 727 aaKnown RBP24.04■■□□□ 1.44
ARHGEF28-201ENST00000296794 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
ARHGEF28-201ENST00000296794 ERICH6Q7L0X2 663 aa23.91■■□□□ 1.42
ARHGEF28-201ENST00000296794 MYT1Q01538 1121 aa23.76■■□□□ 1.39
ARHGEF28-201ENST00000296794 NEFLP07196 543 aa23.74■■□□□ 1.39
ARHGEF28-201ENST00000296794 ABCC9O60706 1549 aa23.63■■□□□ 1.37
ARHGEF28-201ENST00000296794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
ARHGEF28-201ENST00000296794 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
ARHGEF28-201ENST00000296794 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
ARHGEF28-201ENST00000296794 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
ARHGEF28-201ENST00000296794 ITGAEP38570 1179 aa23.42■■□□□ 1.34
ARHGEF28-201ENST00000296794 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
ARHGEF28-201ENST00000296794 POLR3GLQ9BT43 218 aa23.03■■□□□ 1.28
ARHGEF28-201ENST00000296794 GTF3C3Q9Y5Q9 886 aa23.01■■□□□ 1.27
ARHGEF28-201ENST00000296794 FBLN2P98095 1184 aa22.91■■□□□ 1.26
ARHGEF28-201ENST00000296794 CNGB1Q14028 1251 aaPredicted RBP22.9■■□□□ 1.26
ARHGEF28-201ENST00000296794 DAXXQ9UER7 740 aaPredicted RBP22.83■■□□□ 1.25
ARHGEF28-201ENST00000296794 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.24
ARHGEF28-201ENST00000296794 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF28-201ENST00000296794 ACIN1Q9UKV3 1341 aaKnown RBP22.77■■□□□ 1.24
ARHGEF28-201ENST00000296794 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
ARHGEF28-201ENST00000296794 BCANQ96GW7 911 aa22.71■■□□□ 1.23
ARHGEF28-201ENST00000296794 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
ARHGEF28-201ENST00000296794 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
ARHGEF28-201ENST00000296794 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
ARHGEF28-201ENST00000296794 CSRNP3Q8WYN3 585 aa22.61■■□□□ 1.21
ARHGEF28-201ENST00000296794 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
ARHGEF28-201ENST00000296794 ANP32CO43423 234 aa22.58■■□□□ 1.2
ARHGEF28-201ENST00000296794 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF28-201ENST00000296794 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
ARHGEF28-201ENST00000296794 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
ARHGEF28-201ENST00000296794 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
ARHGEF28-201ENST00000296794 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
ARHGEF28-201ENST00000296794 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
ARHGEF28-201ENST00000296794 MYO15BQ96JP2 1530 aa22.35■■□□□ 1.17
ARHGEF28-201ENST00000296794 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
ARHGEF28-201ENST00000296794 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
ARHGEF28-201ENST00000296794 ZNF777Q9ULD5 760 aaPredicted RBP22.25■■□□□ 1.15
ARHGEF28-201ENST00000296794 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
ARHGEF28-201ENST00000296794 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
ARHGEF28-201ENST00000296794 FKBP8Q14318 412 aa22.16■■□□□ 1.14
ARHGEF28-201ENST00000296794 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.13
ARHGEF28-201ENST00000296794 MIER1Q8N108 512 aa22.05■■□□□ 1.12
ARHGEF28-201ENST00000296794 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
ARHGEF28-201ENST00000296794 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
ARHGEF28-201ENST00000296794 ANP32AP39687 249 aaKnown RBP22■■□□□ 1.11
ARHGEF28-201ENST00000296794 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
ARHGEF28-201ENST00000296794 HNRNPUQ00839 825 aaKnown RBP eCLIP21.99■■□□□ 1.11
ARHGEF28-201ENST00000296794 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
ARHGEF28-201ENST00000296794 STAG3Q9UJ98 1225 aa21.97■■□□□ 1.11
ARHGEF28-201ENST00000296794 NEFMP07197 916 aa21.95■■□□□ 1.1
ARHGEF28-201ENST00000296794 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
ARHGEF28-201ENST00000296794 CHGAP10645 457 aaKnown RBP21.92■■□□□ 1.1
ARHGEF28-201ENST00000296794 CLIP1P30622 1438 aa21.9■■□□□ 1.1
ARHGEF28-201ENST00000296794 CANXP27824 592 aaKnown RBP21.89■■□□□ 1.1
ARHGEF28-201ENST00000296794 SLC24A1O60721 1099 aa21.89■■□□□ 1.09
ARHGEF28-201ENST00000296794 NPM2Q86SE8 214 aaKnown RBP21.89■■□□□ 1.09
ARHGEF28-201ENST00000296794 FAM9BQ8IZU0 186 aa21.87■■□□□ 1.09
ARHGEF28-201ENST00000296794 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
ARHGEF28-201ENST00000296794 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
ARHGEF28-201ENST00000296794 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
ARHGEF28-201ENST00000296794 TSPY4P0CV99 314 aa21.81■■□□□ 1.08
ARHGEF28-201ENST00000296794 TSPY10P0CW01 314 aa21.81■■□□□ 1.08
ARHGEF28-201ENST00000296794 CHIC2Q9UKJ5 165 aa21.76■■□□□ 1.07
ARHGEF28-201ENST00000296794 EEA1Q15075 1411 aa21.75■■□□□ 1.07
ARHGEF28-201ENST00000296794 GOLGA3Q08378 1498 aa21.75■■□□□ 1.07
ARHGEF28-201ENST00000296794 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
ARHGEF28-201ENST00000296794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.071e-6■■□□□ 13.1
ARHGEF28-201ENST00000296794 NACADO15069 1562 aa21.72■■□□□ 1.07
ARHGEF28-201ENST00000296794 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.07
ARHGEF28-201ENST00000296794 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
ARHGEF28-201ENST00000296794 CCDC136Q96JN2 1154 aa21.68■■□□□ 1.06
ARHGEF28-201ENST00000296794 BCL11AQ9H165 835 aa21.68■■□□□ 1.06
ARHGEF28-201ENST00000296794 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
ARHGEF28-201ENST00000296794 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
ARHGEF28-201ENST00000296794 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
ARHGEF28-201ENST00000296794 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
ARHGEF28-201ENST00000296794 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
ARHGEF28-201ENST00000296794 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms