RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
ARHGEF28-210ENST00000510312 MYT1Q01538 1121 aa14.7□□□□□ -0.06
ARHGEF28-210ENST00000510312 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
ARHGEF28-210ENST00000510312 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
ARHGEF28-210ENST00000510312 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.07
ARHGEF28-210ENST00000510312 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
ARHGEF28-210ENST00000510312 TTBK1Q5TCY1 1321 aaPredicted RBP14.06□□□□□ -0.16
ARHGEF28-210ENST00000510312 APLP2Q06481 763 aa14.03□□□□□ -0.16
ARHGEF28-210ENST00000510312 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF28-210ENST00000510312 RANGAP1P46060 587 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF28-210ENST00000510312 ATP1B4Q9UN42 357 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF28-210ENST00000510312 NISCHQ9Y2I1 1504 aa13.83□□□□□ -0.2
ARHGEF28-210ENST00000510312 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF28-210ENST00000510312 CCER1Q8TC90 406 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF28-210ENST00000510312 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF28-210ENST00000510312 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.23
ARHGEF28-210ENST00000510312 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
ARHGEF28-210ENST00000510312 ERICH6Q7L0X2 663 aa13.52□□□□□ -0.25
ARHGEF28-210ENST00000510312 UBTFP17480 764 aaKnown RBP13.43□□□□□ -0.26
ARHGEF28-210ENST00000510312 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
ARHGEF28-210ENST00000510312 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
ARHGEF28-210ENST00000510312 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
ARHGEF28-210ENST00000510312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.27
ARHGEF28-210ENST00000510312 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.27
ARHGEF28-210ENST00000510312 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
ARHGEF28-210ENST00000510312 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
ARHGEF28-210ENST00000510312 CNGB1Q14028 1251 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF28-210ENST00000510312 ITGAEP38570 1179 aa13.2□□□□□ -0.3
ARHGEF28-210ENST00000510312 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
ARHGEF28-210ENST00000510312 NEFLP07196 543 aa13.17□□□□□ -0.3
ARHGEF28-210ENST00000510312 HRCP23327 699 aa13.06□□□□□ -0.32
ARHGEF28-210ENST00000510312 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF28-210ENST00000510312 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF28-210ENST00000510312 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
ARHGEF28-210ENST00000510312 FBLN2P98095 1184 aa12.8□□□□□ -0.36
ARHGEF28-210ENST00000510312 BCANQ96GW7 911 aa12.79□□□□□ -0.36
ARHGEF28-210ENST00000510312 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
ARHGEF28-210ENST00000510312 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF28-210ENST00000510312 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
ARHGEF28-210ENST00000510312 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
ARHGEF28-210ENST00000510312 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
ARHGEF28-210ENST00000510312 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
ARHGEF28-210ENST00000510312 BCL11AQ9H165 835 aa12.74□□□□□ -0.37
ARHGEF28-210ENST00000510312 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.37
ARHGEF28-210ENST00000510312 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
ARHGEF28-210ENST00000510312 ZNF326Q5BKZ1 582 aaKnown RBP12.65□□□□□ -0.38
ARHGEF28-210ENST00000510312 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF28-210ENST00000510312 GLIPR1L2Q4G1C9 344 aa12.63□□□□□ -0.39
ARHGEF28-210ENST00000510312 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
ARHGEF28-210ENST00000510312 ABCC9O60706 1549 aa12.61□□□□□ -0.39
ARHGEF28-210ENST00000510312 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF28-210ENST00000510312 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
ARHGEF28-210ENST00000510312 DIEXFQ68CQ4 756 aaKnown RBP12.49□□□□□ -0.41
ARHGEF28-210ENST00000510312 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
ARHGEF28-210ENST00000510312 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF28-210ENST00000510312 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
ARHGEF28-210ENST00000510312 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
ARHGEF28-210ENST00000510312 CHGAP10645 457 aaKnown RBP12.42□□□□□ -0.42
ARHGEF28-210ENST00000510312 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
ARHGEF28-210ENST00000510312 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
ARHGEF28-210ENST00000510312 NEFMP07197 916 aa12.4□□□□□ -0.42
ARHGEF28-210ENST00000510312 CDK11AQ9UQ88 783 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF28-210ENST00000510312 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
ARHGEF28-210ENST00000510312 A0A0G2JS52 829 aa12.35□□□□□ -0.43
ARHGEF28-210ENST00000510312 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
ARHGEF28-210ENST00000510312 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF28-210ENST00000510312 ANP32CO43423 234 aa12.32□□□□□ -0.44
ARHGEF28-210ENST00000510312 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
ARHGEF28-210ENST00000510312 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
ARHGEF28-210ENST00000510312 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
ARHGEF28-210ENST00000510312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■□□□□ 9.8
ARHGEF28-210ENST00000510312 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
ARHGEF28-210ENST00000510312 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF28-210ENST00000510312 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
ARHGEF28-210ENST00000510312 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
ARHGEF28-210ENST00000510312 ANP32BQ92688 251 aaKnown RBP12.12□□□□□ -0.47
ARHGEF28-210ENST00000510312 DCAF1Q9Y4B6 1507 aa12.08□□□□□ -0.48
ARHGEF28-210ENST00000510312 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
ARHGEF28-210ENST00000510312 KDM2AQ9Y2K7 1162 aa12.06□□□□□ -0.48
ARHGEF28-210ENST00000510312 ANP32EQ9BTT0 268 aa12.06□□□□□ -0.48
ARHGEF28-210ENST00000510312 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF28-210ENST00000510312 HSP90AA1P07900 732 aaKnown RBP12.05□□□□□ -0.48
ARHGEF28-210ENST00000510312 ARID4BQ4LE39 1312 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF28-210ENST00000510312 ARXQ96QS3 562 aa12.03□□□□□ -0.48
ARHGEF28-210ENST00000510312 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
ARHGEF28-210ENST00000510312 FAM9BQ8IZU0 186 aa12.01□□□□□ -0.49
ARHGEF28-210ENST00000510312 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
ARHGEF28-210ENST00000510312 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
ARHGEF28-210ENST00000510312 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF28-210ENST00000510312 PPP1R15AO75807 674 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF28-210ENST00000510312 SCRIBQ14160 1630 aa11.96□□□□□ -0.49
ARHGEF28-210ENST00000510312 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
ARHGEF28-210ENST00000510312 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
ARHGEF28-210ENST00000510312 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
ARHGEF28-210ENST00000510312 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.5
ARHGEF28-210ENST00000510312 ERICH6BQ5W0A0 696 aa11.92□□□□□ -0.5
ARHGEF28-210ENST00000510312 TRHP20396 242 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF28-210ENST00000510312 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
ARHGEF28-210ENST00000510312 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
ARHGEF28-210ENST00000510312 TSPY4P0CV99 314 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms