RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C MTC1P47018 478 aaKnown RBP14.26□□□□□ -0.13
YCK1YHR135C DRS1P32892 752 aaKnown RBP13.62□□□□□ -0.23
YCK1YHR135C FAP1P53971 965 aa12.51□□□□□ -0.41
YCK1YHR135C PRI1P10363 409 aa11.84□□□□□ -0.51
YCK1YHR135C DIP2Q12220 943 aaPredicted RBP11.84□□□□□ -0.51
YCK1YHR135C ISW2Q08773 1120 aa11.82□□□□□ -0.52
YCK1YHR135C AAD16Q02895 342 aa11.76□□□□□ -0.53
YCK1YHR135C PRY3P47033 881 aa11.71□□□□□ -0.53
YCK1YHR135C RPG1P38249 964 aaKnown RBP11.63□□□□□ -0.55
YCK1YHR135C BFR2Q06631 534 aaKnown RBP11.49□□□□□ -0.57
YCK1YHR135C AVT3P36062 692 aa11.46□□□□□ -0.58
YCK1YHR135C RSE1Q04693 1361 aaKnown RBP11.4□□□□□ -0.58
YCK1YHR135C TSR3Q12094 313 aaKnown RBP11.18□□□□□ -0.62
YCK1YHR135C HAA1Q12753 694 aaKnown RBP11.08□□□□□ -0.64
YCK1YHR135C SGS1P35187 1447 aa11.08□□□□□ -0.64
YCK1YHR135C RPL17AP05740 184 aaKnown RBP10.98□□□□□ -0.65
YCK1YHR135C RPL17BP46990 184 aaKnown RBP10.98□□□□□ -0.65
YCK1YHR135C REB1P21538 810 aa10.95□□□□□ -0.66
YCK1YHR135C YCK3P39962 524 aa10.92□□□□□ -0.66
YCK1YHR135C INO80P53115 1489 aa10.87□□□□□ -0.67
YCK1YHR135C MRPL32P25348 183 aa10.84□□□□□ -0.67
YCK1YHR135C TCB3Q03640 1545 aaKnown RBP10.77□□□□□ -0.69
YCK1YHR135C TY1B-DR4Q07793 1604 aa10.74□□□□□ -0.69
YCK1YHR135C MON2P48563 1636 aaPredicted RBP10.71□□□□□ -0.69
YCK1YHR135C SPA2P23201 1466 aaKnown RBP10.59□□□□□ -0.71
YCK1YHR135C SSN2P38931 1420 aa10.59□□□□□ -0.71
YCK1YHR135C HSL1P34244 1518 aa10.51□□□□□ -0.73
YCK1YHR135C SWR1Q05471 1514 aa10.49□□□□□ -0.73
YCK1YHR135C SPT21P35209 758 aa10.47□□□□□ -0.73
YCK1YHR135C SPT6P23615 1451 aaKnown RBP10.44□□□□□ -0.74
YCK1YHR135C TFA1P36100 482 aa10.33□□□□□ -0.76
YCK1YHR135C YGL015CP33199 130 aa10.33□□□□□ -0.76
YCK1YHR135C HIR3P47171 1648 aa10.32□□□□□ -0.76
YCK1YHR135C YKR023WP36119 530 aaKnown RBP10.29□□□□□ -0.76
YCK1YHR135C CDC27P38042 758 aa10.22□□□□□ -0.77
YCK1YHR135C RIM101P33400 625 aa10.22□□□□□ -0.77
YCK1YHR135C XRN1P22147 1528 aaKnown RBP10.21□□□□□ -0.78
YCK1YHR135C DNA2P38859 1522 aa10.18□□□□□ -0.78
YCK1YHR135C KOG1P38873 1557 aa10.12□□□□□ -0.79
YCK1YHR135C TFC8Q12308 588 aa10.11□□□□□ -0.79
YCK1YHR135C REV3P14284 1504 aa10.1□□□□□ -0.79
YCK1YHR135C HOP09932 586 aa10.08□□□□□ -0.8
YCK1YHR135C UBP10P53874 792 aaPredicted RBP10.01□□□□□ -0.81
YCK1YHR135C SIN3P22579 1536 aa10□□□□□ -0.81
YCK1YHR135C THO2P53552 1597 aaKnown RBP10□□□□□ -0.81
YCK1YHR135C DCD1P06773 312 aa9.98□□□□□ -0.81
YCK1YHR135C SSK2P53599 1579 aa9.97□□□□□ -0.81
YCK1YHR135C TAF2P23255 1407 aa9.94□□□□□ -0.82
YCK1YHR135C BUD4P47136 1447 aa9.91□□□□□ -0.82
YCK1YHR135C ESP1Q03018 1630 aa9.91□□□□□ -0.82
YCK1YHR135C MAP2P38174 421 aaKnown RBP9.9□□□□□ -0.82
YCK1YHR135C ATG2P53855 1592 aa9.89□□□□□ -0.83
YCK1YHR135C ECM5Q03214 1411 aa9.88□□□□□ -0.83
YCK1YHR135C OXP1P28273 1286 aa9.83□□□□□ -0.84
YCK1YHR135C MYO2P19524 1574 aaKnown RBP9.83□□□□□ -0.84
YCK1YHR135C YIL055CP40523 627 aaKnown RBP9.82□□□□□ -0.84
YCK1YHR135C PEP1P32319 1579 aa9.79□□□□□ -0.84
YCK1YHR135C MDS3P53094 1487 aa9.79□□□□□ -0.84
YCK1YHR135C SCY1P53009 804 aa9.78□□□□□ -0.84
YCK1YHR135C BCH2P36122 765 aa9.78□□□□□ -0.84
YCK1YHR135C SKI3P17883 1432 aaKnown RBP9.77□□□□□ -0.85
YCK1YHR135C PTP3P40048 928 aa9.76□□□□□ -0.85
YCK1YHR135C SLX5P32828 619 aaKnown RBP9.69□□□□□ -0.86
YCK1YHR135C YPK9Q12697 1472 aa9.69□□□□□ -0.86
YCK1YHR135C TIF4632P39936 914 aaKnown RBP9.66□□□□□ -0.86
YCK1YHR135C SCC2Q04002 1493 aa9.63□□□□□ -0.87
YCK1YHR135C RSM7P47150 247 aa9.63□□□□□ -0.87
YCK1YHR135C YAH1Q12184 172 aaKnown RBP9.63□□□□□ -0.87
YCK1YHR135C POL1P13382 1468 aa9.62□□□□□ -0.87
YCK1YHR135C STU1P38198 1513 aa9.6□□□□□ -0.87
YCK1YHR135C RKR1Q04781 1562 aa9.58□□□□□ -0.88
YCK1YHR135C EPS1P40557 701 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-LR1P0C2J3 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-FP0CX63 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-GR2P0CX64 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-CP25384 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-DR2Q03494 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TY1B-DR1Q03855 1755 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-DR3Q07791 1770 aaKnown RBP9.58□□□□□ -0.88
YCK1YHR135C TY2B-OR1Q12113 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-DR1Q12472 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TY2B-OR2Q12501 1770 aa9.58□□□□□ -0.88
YCK1YHR135C TGL3P40308 642 aa9.56□□□□□ -0.88
YCK1YHR135C BBC1P47068 1157 aa9.56□□□□□ -0.88
YCK1YHR135C RPO31P04051 1460 aa9.55□□□□□ -0.88
YCK1YHR135C UFD4P33202 1483 aa9.54□□□□□ -0.88
YCK1YHR135C BPT1P14772 1559 aa9.53□□□□□ -0.88
YCK1YHR135C BDF1P35817 686 aa9.53□□□□□ -0.88
YCK1YHR135C TY1B-DR3Q99231 1755 aa9.52□□□□□ -0.88
YCK1YHR135C YCF1P39109 1515 aaKnown RBP9.51□□□□□ -0.89
YCK1YHR135C AI2P03876 854 aa9.5□□□□□ -0.89
YCK1YHR135C YOR1P53049 1477 aa9.5□□□□□ -0.89
YCK1YHR135C TY2B-BQ12491 1770 aa9.49□□□□□ -0.89
YCK1YHR135C MMS22Q06164 1454 aa9.49□□□□□ -0.89
YCK1YHR135C SSP1P38871 571 aa9.49□□□□□ -0.89
YCK1YHR135C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89 RIP-Chip
YCK1YHR135C CHD1P32657 1468 aa9.47□□□□□ -0.89
YCK1YHR135C TOP2P06786 1428 aaKnown RBP9.46□□□□□ -0.89
YCK1YHR135C YLR271WQ06152 274 aa9.46□□□□□ -0.89
YCK1YHR135C TY1B-BRQ12193 1756 aa9.43□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms