Protein–RNA interactions for Protein: P47136

BUD4, Bud site selection protein 4, yeastyeast

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BUD4P47136 YML009W-BYML009W-B 477 nt35.66■■■■□ 3.3
BUD4P47136 NOP1YDL014W 984 nt34.7■■■■□ 3.15
BUD4P47136 NSR1YGR159C 1245 nt34.01■■■■□ 3.03
BUD4P47136 YKL036CYKL036C 393 nt33.22■■■□□ 2.91
BUD4P47136 YJL027CYJL027C 417 nt31.27■■■□□ 2.6
BUD4P47136 SCS3YGL126W 1143 nt30.97■■■□□ 2.55
BUD4P47136 Q0297Q0297 156 nt30.79■■■□□ 2.52
BUD4P47136 SRX1YKL086W 384 nt30.45■■■□□ 2.46
BUD4P47136 MDJ1YFL016C 1536 nt29.65■■■□□ 2.34
BUD4P47136 YCR051WYCR051W 669 nt29.12■■■□□ 2.25
BUD4P47136 YOL085CYOL085C 342 nt28.69■■■□□ 2.18
BUD4P47136 SCJ1YMR214W 1134 nt28.43■■■□□ 2.14
BUD4P47136 PKP1YIL042C 1185 nt28.39■■■□□ 2.14
BUD4P47136 ATS1YAL020C 1002 nt27.81■■■□□ 2.04
BUD4P47136 RPP1BYDL130W 321 nt27.67■■■□□ 2.02
BUD4P47136 TRN1tP(UGG)A 72 nt27■■□□□ 1.91
BUD4P47136 SUF9tP(UGG)F 72 nt27■■□□□ 1.91
BUD4P47136 SUF8tP(UGG)H 72 nt27■■□□□ 1.91
BUD4P47136 tP(UGG)LtP(UGG)L 72 nt27■■□□□ 1.91
BUD4P47136 SUF7tP(UGG)M 72 nt27■■□□□ 1.91
BUD4P47136 tP(UGG)N1tP(UGG)N1 72 nt27■■□□□ 1.91
BUD4P47136 tP(UGG)N2tP(UGG)N2 72 nt27■■□□□ 1.91
BUD4P47136 tP(UGG)O1tP(UGG)O1 72 nt27■■□□□ 1.91
BUD4P47136 SUF11tP(UGG)O2 72 nt27■■□□□ 1.91
BUD4P47136 CCC1YLR220W 969 nt26.78■■□□□ 1.88
BUD4P47136 PET122YER153C 765 nt26.52■■□□□ 1.84
BUD4P47136 DBP2YNL112W 1641 nt26.5■■□□□ 1.83
BUD4P47136 SCR1SCR1 522 nt26.34■■□□□ 1.81
BUD4P47136 RTC3YHR087W 336 nt26.16■■□□□ 1.78
BUD4P47136 tP(UGG)O3tP(UGG)O3 72 nt25.84■■□□□ 1.73
BUD4P47136 RRN5YLR141W 1092 nt25.7■■□□□ 1.7
BUD4P47136 RSB1YOR049C 1065 nt25.65■■□□□ 1.7
BUD4P47136 PST2YDR032C 597 nt25.5■■□□□ 1.67
BUD4P47136 YKL097CYKL097C 411 nt25.25■■□□□ 1.63
BUD4P47136 YER088W-BYER088W-B 147 nt25.22■■□□□ 1.63
BUD4P47136 RVS167YDR388W 1449 nt25.08■■□□□ 1.61
BUD4P47136 YDJ1YNL064C 1230 nt24.83■■□□□ 1.57
BUD4P47136 YBR190WYBR190W 312 nt24.61■■□□□ 1.53
BUD4P47136 SHR5YOL110W 714 nt24.5■■□□□ 1.51
BUD4P47136 SHU1YHL006C 453 nt24.41■■□□□ 1.5
BUD4P47136 GAR1YHR089C 618 nt24.34■■□□□ 1.49
BUD4P47136 YOR139CYOR139C 393 nt24.08■■□□□ 1.44
BUD4P47136 YAL037C-BYAL037C-B 975 nt23.78■■□□□ 1.4
BUD4P47136 DEP1YAL013W 1218 nt23.66■■□□□ 1.38
BUD4P47136 NPL3YDR432W 1245 nt23.61■■□□□ 1.37
BUD4P47136 TIR1YER011W 765 nt23.4■■□□□ 1.34
BUD4P47136 URN1YPR152C 1398 nt23.22■■□□□ 1.31
BUD4P47136 YNL208WYNL208W 600 nt23.13■■□□□ 1.29
BUD4P47136 MNP1YGL068W 585 nt23.12■■□□□ 1.29
BUD4P47136 RPN10YHR200W 807 nt22.99■■□□□ 1.27
BUD4P47136 SRB2YHR041C 633 nt22.97■■□□□ 1.27
BUD4P47136 SSA1YAL005C 1929 nt22.94■■□□□ 1.26
BUD4P47136 YOL037CYOL037C 354 nt22.9■■□□□ 1.26
BUD4P47136 tM(CAU)CtM(CAU)C 72 nt22.88■■□□□ 1.25
BUD4P47136 IMT4tM(CAU)E 72 nt22.88■■□□□ 1.25
BUD4P47136 IMT3tM(CAU)J3 72 nt22.88■■□□□ 1.25
BUD4P47136 IMT1tM(CAU)O1 72 nt22.88■■□□□ 1.25
BUD4P47136 IMT2tM(CAU)P 72 nt22.88■■□□□ 1.25
BUD4P47136 HOM6YJR139C 1080 nt22.78■■□□□ 1.24
BUD4P47136 YGR021WYGR021W 873 nt22.72■■□□□ 1.23
BUD4P47136 WWM1YFL010C 636 nt22.66■■□□□ 1.22
BUD4P47136 MOT3YMR070W 1473 nt22.61■■□□□ 1.21
BUD4P47136 BSC6YOL137W 1494 nt22.58■■□□□ 1.2
BUD4P47136 OPI9YLR338W 858 nt22.5■■□□□ 1.19
BUD4P47136 RKM5YLR137W 1104 nt22.46■■□□□ 1.19
BUD4P47136 PUS2YGL063W 1113 nt22.42■■□□□ 1.18
BUD4P47136 SAH1YER043C 1350 nt22.23■■□□□ 1.15
BUD4P47136 YJR120WYJR120W 351 nt22.21■■□□□ 1.15
BUD4P47136 YLR281CYLR281C 468 nt22.17■■□□□ 1.14
BUD4P47136 YFL021C-AYFL021C-A 855 nt22.14■■□□□ 1.13
BUD4P47136 YJR018WYJR018W 363 nt22.12■■□□□ 1.13
BUD4P47136 WHI5YOR083W 888 nt22■■□□□ 1.11
BUD4P47136 FMP45YDL222C 930 nt21.99■■□□□ 1.11
BUD4P47136 RPP2BYDR382W 333 nt21.95■■□□□ 1.1
BUD4P47136 SSA3YBL075C 1950 nt21.89■■□□□ 1.09
BUD4P47136 MRPL8YJL063C 717 nt21.87■■□□□ 1.09
BUD4P47136 PUN1YLR414C 792 nt21.86■■□□□ 1.09
BUD4P47136 YLR236CYLR236C 324 nt21.84■■□□□ 1.09
BUD4P47136 UBX6YJL048C 1191 nt21.8■■□□□ 1.08
BUD4P47136 YPR011CYPR011C 981 nt21.77■■□□□ 1.08
BUD4P47136 BDH2YAL061W 1254 nt21.72■■□□□ 1.07
BUD4P47136 DSK2YMR276W 1122 nt21.72■■□□□ 1.07
BUD4P47136 YCH1YGR203W 447 nt21.66■■□□□ 1.06
BUD4P47136 ARE1YCR048W 1833 nt21.62■■□□□ 1.05
BUD4P47136 PUT4YOR348C 1884 nt21.6■■□□□ 1.05
BUD4P47136 YHR049C-AYHR049C-A 297 nt21.52■■□□□ 1.04
BUD4P47136 ADO1YJR105W 1023 nt21.52■■□□□ 1.04
BUD4P47136 YEL076C-AYEL076C-A 651 nt21.49■■□□□ 1.03
BUD4P47136 YEL076CYEL076C 651 nt21.49■■□□□ 1.03
BUD4P47136 YLR464WYLR464W 651 nt21.49■■□□□ 1.03
BUD4P47136 PTC2YER089C 1395 nt21.46■■□□□ 1.03
BUD4P47136 LSM3YLR438C-A 270 nt21.43■■□□□ 1.02
BUD4P47136 SPP1YPL138C 1062 nt21.38■■□□□ 1.01
BUD4P47136 LPX1YOR084W 1164 nt21.35■■□□□ 1.01
BUD4P47136 IMP2'YIL154C 1041 nt21.34■■□□□ 1.01
BUD4P47136 RTG1YOL067C 534 nt21.3■■□□□ 1
BUD4P47136 YBL100CYBL100C 315 nt21.27■■□□□ 1
BUD4P47136 YLR154C-GYLR154C-G 150 nt21.25■□□□□ 0.99
BUD4P47136 FPR4YLR449W 1179 nt21.08■□□□□ 0.97
BUD4P47136 BUD23YCR047C 828 nt21.07■□□□□ 0.96
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms