Protein–RNA interactions for Protein: Q99231
TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeast
Protein |
RNA |
Prediction (catRAPID) |
Interaction (RIP-Chip) |
Gene |
UniProt Accession |
Gene |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
Detected Interaction |
TY1B-DR3 | Q99231 | YML009W-B | YML009W-B | 477 nt | | 33,22 | ■■■□□ 2,91 | |
TY1B-DR3 | Q99231 | NOP1 | YDL014W | 984 nt | | 31,78 | ■■■□□ 2,68 | |
TY1B-DR3 | Q99231 | NSR1 | YGR159C | 1245 nt | | 31,63 | ■■■□□ 2,65 | |
TY1B-DR3 | Q99231 | YKL036C | YKL036C | 393 nt | | 30,5 | ■■■□□ 2,47 | |
TY1B-DR3 | Q99231 | YJL027C | YJL027C | 417 nt | | 28,57 | ■■■□□ 2,16 | |
TY1B-DR3 | Q99231 | SCS3 | YGL126W | 1143 nt | | 28,45 | ■■■□□ 2,14 | |
TY1B-DR3 | Q99231 | Q0297 | Q0297 | 156 nt | | 28,39 | ■■■□□ 2,14 | |
TY1B-DR3 | Q99231 | SRX1 | YKL086W | 384 nt | | 28,3 | ■■■□□ 2,12 | |
TY1B-DR3 | Q99231 | MDJ1 | YFL016C | 1536 nt | | 28,15 | ■■■□□ 2,1 | |
TY1B-DR3 | Q99231 | YCR051W | YCR051W | 669 nt | | 26,96 | ■■□□□ 1,91 | |
TY1B-DR3 | Q99231 | YOL085C | YOL085C | 342 nt | | 26,23 | ■■□□□ 1,79 | |
TY1B-DR3 | Q99231 | PKP1 | YIL042C | 1185 nt | | 26,22 | ■■□□□ 1,79 | |
TY1B-DR3 | Q99231 | SCJ1 | YMR214W | 1134 nt | | 25,54 | ■■□□□ 1,68 | |
TY1B-DR3 | Q99231 | RPP1B | YDL130W | 321 nt | | 25,44 | ■■□□□ 1,66 | |
TY1B-DR3 | Q99231 | ATS1 | YAL020C | 1002 nt | | 25,28 | ■■□□□ 1,64 | |
TY1B-DR3 | Q99231 | TRN1 | tP(UGG)A | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | SUF9 | tP(UGG)F | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | SUF8 | tP(UGG)H | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | tP(UGG)L | tP(UGG)L | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | SUF7 | tP(UGG)M | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | tP(UGG)N1 | tP(UGG)N1 | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | tP(UGG)N2 | tP(UGG)N2 | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | tP(UGG)O1 | tP(UGG)O1 | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | SUF11 | tP(UGG)O2 | 72 nt | | 25,26 | ■■□□□ 1,63 | |
TY1B-DR3 | Q99231 | DBP2 | YNL112W | 1641 nt | | 25,08 | ■■□□□ 1,61 | |
TY1B-DR3 | Q99231 | CCC1 | YLR220W | 969 nt | | 24,93 | ■■□□□ 1,58 | |
TY1B-DR3 | Q99231 | PET122 | YER153C | 765 nt | | 24,59 | ■■□□□ 1,53 | |
TY1B-DR3 | Q99231 | SCR1 | SCR1 | 522 nt | | 24,16 | ■■□□□ 1,46 | |
TY1B-DR3 | Q99231 | tP(UGG)O3 | tP(UGG)O3 | 72 nt | | 24 | ■■□□□ 1,43 | |
TY1B-DR3 | Q99231 | RRN5 | YLR141W | 1092 nt | | 23,7 | ■■□□□ 1,38 | |
TY1B-DR3 | Q99231 | RTC3 | YHR087W | 336 nt | | 23,66 | ■■□□□ 1,38 | |
TY1B-DR3 | Q99231 | RSB1 | YOR049C | 1065 nt | | 23,64 | ■■□□□ 1,37 | |
TY1B-DR3 | Q99231 | RVS167 | YDR388W | 1449 nt | | 23,37 | ■■□□□ 1,33 | |
TY1B-DR3 | Q99231 | YER088W-B | YER088W-B | 147 nt | | 23,27 | ■■□□□ 1,32 | |
TY1B-DR3 | Q99231 | PST2 | YDR032C | 597 nt | | 23,26 | ■■□□□ 1,31 | |
TY1B-DR3 | Q99231 | YBR190W | YBR190W | 312 nt | | 23,22 | ■■□□□ 1,31 | |
TY1B-DR3 | Q99231 | YDJ1 | YNL064C | 1230 nt | | 22,95 | ■■□□□ 1,26 | |
TY1B-DR3 | Q99231 | YKL097C | YKL097C | 411 nt | | 22,94 | ■■□□□ 1,26 | |
TY1B-DR3 | Q99231 | SHR5 | YOL110W | 714 nt | | 22,86 | ■■□□□ 1,25 | |
TY1B-DR3 | Q99231 | GAR1 | YHR089C | 618 nt | | 22,6 | ■■□□□ 1,21 | |
TY1B-DR3 | Q99231 | SHU1 | YHL006C | 453 nt | | 22,45 | ■■□□□ 1,19 | |
TY1B-DR3 | Q99231 | DEP1 | YAL013W | 1218 nt | | 22,35 | ■■□□□ 1,17 | |
TY1B-DR3 | Q99231 | YAL037C-B | YAL037C-B | 975 nt | | 22,11 | ■■□□□ 1,13 | |
TY1B-DR3 | Q99231 | YOR139C | YOR139C | 393 nt | | 22,1 | ■■□□□ 1,13 | |
TY1B-DR3 | Q99231 | URN1 | YPR152C | 1398 nt | | 21,97 | ■■□□□ 1,11 | |
TY1B-DR3 | Q99231 | TIR1 | YER011W | 765 nt | | 21,73 | ■■□□□ 1,07 | |
TY1B-DR3 | Q99231 | SRB2 | YHR041C | 633 nt | | 21,66 | ■■□□□ 1,06 | |
TY1B-DR3 | Q99231 | MNP1 | YGL068W | 585 nt | | 21,55 | ■■□□□ 1,04 | |
TY1B-DR3 | Q99231 | YNL208W | YNL208W | 600 nt | | 21,53 | ■■□□□ 1,04 | |
TY1B-DR3 | Q99231 | NPL3 | YDR432W | 1245 nt | | 21,51 | ■■□□□ 1,03 | |
TY1B-DR3 | Q99231 | SSA1 | YAL005C | 1929 nt | | 21,45 | ■■□□□ 1,02 | |
TY1B-DR3 | Q99231 | RPN10 | YHR200W | 807 nt | | 21,39 | ■■□□□ 1,01 | |
TY1B-DR3 | Q99231 | OPI9 | YLR338W | 858 nt | | 21,23 | ■□□□□ 0,99 | |
TY1B-DR3 | Q99231 | WWM1 | YFL010C | 636 nt | | 21,2 | ■□□□□ 0,98 | |
TY1B-DR3 | Q99231 | SAH1 | YER043C | 1350 nt | | 21,17 | ■□□□□ 0,98 | |
TY1B-DR3 | Q99231 | YJR120W | YJR120W | 351 nt | | 21,13 | ■□□□□ 0,97 | |
TY1B-DR3 | Q99231 | HOM6 | YJR139C | 1080 nt | | 21,1 | ■□□□□ 0,97 | |
TY1B-DR3 | Q99231 | YOL037C | YOL037C | 354 nt | | 21 | ■□□□□ 0,95 | |
TY1B-DR3 | Q99231 | YGR021W | YGR021W | 873 nt | | 20,92 | ■□□□□ 0,94 | |
TY1B-DR3 | Q99231 | YJR018W | YJR018W | 363 nt | | 20,85 | ■□□□□ 0,93 | |
TY1B-DR3 | Q99231 | tM(CAU)C | tM(CAU)C | 72 nt | | 20,8 | ■□□□□ 0,92 | |
TY1B-DR3 | Q99231 | IMT4 | tM(CAU)E | 72 nt | | 20,8 | ■□□□□ 0,92 | |
TY1B-DR3 | Q99231 | IMT3 | tM(CAU)J3 | 72 nt | | 20,8 | ■□□□□ 0,92 | |
TY1B-DR3 | Q99231 | IMT1 | tM(CAU)O1 | 72 nt | | 20,8 | ■□□□□ 0,92 | |
TY1B-DR3 | Q99231 | IMT2 | tM(CAU)P | 72 nt | | 20,8 | ■□□□□ 0,92 | |
TY1B-DR3 | Q99231 | ARE1 | YCR048W | 1833 nt | | 20,73 | ■□□□□ 0,91 | |
TY1B-DR3 | Q99231 | RKM5 | YLR137W | 1104 nt | | 20,71 | ■□□□□ 0,91 | |
TY1B-DR3 | Q99231 | PUT4 | YOR348C | 1884 nt | | 20,7 | ■□□□□ 0,9 | |
TY1B-DR3 | Q99231 | YHR049C-A | YHR049C-A | 297 nt | | 20,69 | ■□□□□ 0,9 | |
TY1B-DR3 | Q99231 | SSA3 | YBL075C | 1950 nt | | 20,63 | ■□□□□ 0,89 | |
TY1B-DR3 | Q99231 | YFL021C-A | YFL021C-A | 855 nt | | 20,54 | ■□□□□ 0,88 | |
TY1B-DR3 | Q99231 | PUS2 | YGL063W | 1113 nt | | 20,54 | ■□□□□ 0,88 | |
TY1B-DR3 | Q99231 | PUN1 | YLR414C | 792 nt | | 20,53 | ■□□□□ 0,88 | |
TY1B-DR3 | Q99231 | MOT3 | YMR070W | 1473 nt | | 20,51 | ■□□□□ 0,87 | |
TY1B-DR3 | Q99231 | RPP2B | YDR382W | 333 nt | | 20,42 | ■□□□□ 0,86 | |
TY1B-DR3 | Q99231 | YLR281C | YLR281C | 468 nt | | 20,36 | ■□□□□ 0,85 | |
TY1B-DR3 | Q99231 | BDH2 | YAL061W | 1254 nt | | 20,34 | ■□□□□ 0,85 | |
TY1B-DR3 | Q99231 | WHI5 | YOR083W | 888 nt | | 20,29 | ■□□□□ 0,84 | |
TY1B-DR3 | Q99231 | YLR236C | YLR236C | 324 nt | | 20,29 | ■□□□□ 0,84 | |
TY1B-DR3 | Q99231 | PTC2 | YER089C | 1395 nt | | 20,24 | ■□□□□ 0,83 | |
TY1B-DR3 | Q99231 | POA1 | YBR022W | 534 nt | | 20,18 | ■□□□□ 0,82 | |
TY1B-DR3 | Q99231 | YPR011C | YPR011C | 981 nt | | 20,18 | ■□□□□ 0,82 | |
TY1B-DR3 | Q99231 | FMP45 | YDL222C | 930 nt | | 20,17 | ■□□□□ 0,82 | |
TY1B-DR3 | Q99231 | BUD23 | YCR047C | 828 nt | | 20,14 | ■□□□□ 0,81 | |
TY1B-DR3 | Q99231 | BSC6 | YOL137W | 1494 nt | | 20,12 | ■□□□□ 0,81 | |
TY1B-DR3 | Q99231 | FIS1 | YIL065C | 468 nt | | 20,08 | ■□□□□ 0,8 | |
TY1B-DR3 | Q99231 | YBL100C | YBL100C | 315 nt | | 20,02 | ■□□□□ 0,8 | |
TY1B-DR3 | Q99231 | DSK2 | YMR276W | 1122 nt | | 19,94 | ■□□□□ 0,78 | |
TY1B-DR3 | Q99231 | PHO4 | YFR034C | 939 nt | | 19,85 | ■□□□□ 0,77 | |
TY1B-DR3 | Q99231 | LPX1 | YOR084W | 1164 nt | | 19,83 | ■□□□□ 0,77 | |
TY1B-DR3 | Q99231 | YLR154C-G | YLR154C-G | 150 nt | | 19,83 | ■□□□□ 0,76 | |
TY1B-DR3 | Q99231 | NAB2 | YGL122C | 1578 nt | | 19,82 | ■□□□□ 0,76 | |
TY1B-DR3 | Q99231 | FPR4 | YLR449W | 1179 nt | | 19,82 | ■□□□□ 0,76 | |
TY1B-DR3 | Q99231 | LSM3 | YLR438C-A | 270 nt | | 19,8 | ■□□□□ 0,76 | |
TY1B-DR3 | Q99231 | SPP1 | YPL138C | 1062 nt | | 19,73 | ■□□□□ 0,75 | |
TY1B-DR3 | Q99231 | YCH1 | YGR203W | 447 nt | | 19,71 | ■□□□□ 0,75 | |
TY1B-DR3 | Q99231 | RTG1 | YOL067C | 534 nt | | 19,68 | ■□□□□ 0,74 | |
TY1B-DR3 | Q99231 | DAL1 | YIR027C | 1383 nt | | 19,68 | ■□□□□ 0,74 | |
TY1B-DR3 | Q99231 | UBX6 | YJL048C | 1191 nt | | 19,63 | ■□□□□ 0,73 | |
TY1B-DR3 | Q99231 | MRPL8 | YJL063C | 717 nt | | 19,62 | ■□□□□ 0,73 | |
Retrieved 100 of 7,029 protein–RNA pairs in 12,3 ms