Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 YML009W-BYML009W-B 477 nt33,22■■■□□ 2,91
TY1B-DR3Q99231 NOP1YDL014W 984 nt31,78■■■□□ 2,68
TY1B-DR3Q99231 NSR1YGR159C 1245 nt31,63■■■□□ 2,65
TY1B-DR3Q99231 YKL036CYKL036C 393 nt30,5■■■□□ 2,47
TY1B-DR3Q99231 YJL027CYJL027C 417 nt28,57■■■□□ 2,16
TY1B-DR3Q99231 SCS3YGL126W 1143 nt28,45■■■□□ 2,14
TY1B-DR3Q99231 Q0297Q0297 156 nt28,39■■■□□ 2,14
TY1B-DR3Q99231 SRX1YKL086W 384 nt28,3■■■□□ 2,12
TY1B-DR3Q99231 MDJ1YFL016C 1536 nt28,15■■■□□ 2,1
TY1B-DR3Q99231 YCR051WYCR051W 669 nt26,96■■□□□ 1,91
TY1B-DR3Q99231 YOL085CYOL085C 342 nt26,23■■□□□ 1,79
TY1B-DR3Q99231 PKP1YIL042C 1185 nt26,22■■□□□ 1,79
TY1B-DR3Q99231 SCJ1YMR214W 1134 nt25,54■■□□□ 1,68
TY1B-DR3Q99231 RPP1BYDL130W 321 nt25,44■■□□□ 1,66
TY1B-DR3Q99231 ATS1YAL020C 1002 nt25,28■■□□□ 1,64
TY1B-DR3Q99231 TRN1tP(UGG)A 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 SUF9tP(UGG)F 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 SUF8tP(UGG)H 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 tP(UGG)LtP(UGG)L 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 SUF7tP(UGG)M 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 tP(UGG)N1tP(UGG)N1 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 tP(UGG)N2tP(UGG)N2 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 tP(UGG)O1tP(UGG)O1 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 SUF11tP(UGG)O2 72 nt25,26■■□□□ 1,63
TY1B-DR3Q99231 DBP2YNL112W 1641 nt25,08■■□□□ 1,61
TY1B-DR3Q99231 CCC1YLR220W 969 nt24,93■■□□□ 1,58
TY1B-DR3Q99231 PET122YER153C 765 nt24,59■■□□□ 1,53
TY1B-DR3Q99231 SCR1SCR1 522 nt24,16■■□□□ 1,46
TY1B-DR3Q99231 tP(UGG)O3tP(UGG)O3 72 nt24■■□□□ 1,43
TY1B-DR3Q99231 RRN5YLR141W 1092 nt23,7■■□□□ 1,38
TY1B-DR3Q99231 RTC3YHR087W 336 nt23,66■■□□□ 1,38
TY1B-DR3Q99231 RSB1YOR049C 1065 nt23,64■■□□□ 1,37
TY1B-DR3Q99231 RVS167YDR388W 1449 nt23,37■■□□□ 1,33
TY1B-DR3Q99231 YER088W-BYER088W-B 147 nt23,27■■□□□ 1,32
TY1B-DR3Q99231 PST2YDR032C 597 nt23,26■■□□□ 1,31
TY1B-DR3Q99231 YBR190WYBR190W 312 nt23,22■■□□□ 1,31
TY1B-DR3Q99231 YDJ1YNL064C 1230 nt22,95■■□□□ 1,26
TY1B-DR3Q99231 YKL097CYKL097C 411 nt22,94■■□□□ 1,26
TY1B-DR3Q99231 SHR5YOL110W 714 nt22,86■■□□□ 1,25
TY1B-DR3Q99231 GAR1YHR089C 618 nt22,6■■□□□ 1,21
TY1B-DR3Q99231 SHU1YHL006C 453 nt22,45■■□□□ 1,19
TY1B-DR3Q99231 DEP1YAL013W 1218 nt22,35■■□□□ 1,17
TY1B-DR3Q99231 YAL037C-BYAL037C-B 975 nt22,11■■□□□ 1,13
TY1B-DR3Q99231 YOR139CYOR139C 393 nt22,1■■□□□ 1,13
TY1B-DR3Q99231 URN1YPR152C 1398 nt21,97■■□□□ 1,11
TY1B-DR3Q99231 TIR1YER011W 765 nt21,73■■□□□ 1,07
TY1B-DR3Q99231 SRB2YHR041C 633 nt21,66■■□□□ 1,06
TY1B-DR3Q99231 MNP1YGL068W 585 nt21,55■■□□□ 1,04
TY1B-DR3Q99231 YNL208WYNL208W 600 nt21,53■■□□□ 1,04
TY1B-DR3Q99231 NPL3YDR432W 1245 nt21,51■■□□□ 1,03
TY1B-DR3Q99231 SSA1YAL005C 1929 nt21,45■■□□□ 1,02
TY1B-DR3Q99231 RPN10YHR200W 807 nt21,39■■□□□ 1,01
TY1B-DR3Q99231 OPI9YLR338W 858 nt21,23■□□□□ 0,99
TY1B-DR3Q99231 WWM1YFL010C 636 nt21,2■□□□□ 0,98
TY1B-DR3Q99231 SAH1YER043C 1350 nt21,17■□□□□ 0,98
TY1B-DR3Q99231 YJR120WYJR120W 351 nt21,13■□□□□ 0,97
TY1B-DR3Q99231 HOM6YJR139C 1080 nt21,1■□□□□ 0,97
TY1B-DR3Q99231 YOL037CYOL037C 354 nt21■□□□□ 0,95
TY1B-DR3Q99231 YGR021WYGR021W 873 nt20,92■□□□□ 0,94
TY1B-DR3Q99231 YJR018WYJR018W 363 nt20,85■□□□□ 0,93
TY1B-DR3Q99231 tM(CAU)CtM(CAU)C 72 nt20,8■□□□□ 0,92
TY1B-DR3Q99231 IMT4tM(CAU)E 72 nt20,8■□□□□ 0,92
TY1B-DR3Q99231 IMT3tM(CAU)J3 72 nt20,8■□□□□ 0,92
TY1B-DR3Q99231 IMT1tM(CAU)O1 72 nt20,8■□□□□ 0,92
TY1B-DR3Q99231 IMT2tM(CAU)P 72 nt20,8■□□□□ 0,92
TY1B-DR3Q99231 ARE1YCR048W 1833 nt20,73■□□□□ 0,91
TY1B-DR3Q99231 RKM5YLR137W 1104 nt20,71■□□□□ 0,91
TY1B-DR3Q99231 PUT4YOR348C 1884 nt20,7■□□□□ 0,9
TY1B-DR3Q99231 YHR049C-AYHR049C-A 297 nt20,69■□□□□ 0,9
TY1B-DR3Q99231 SSA3YBL075C 1950 nt20,63■□□□□ 0,89
TY1B-DR3Q99231 YFL021C-AYFL021C-A 855 nt20,54■□□□□ 0,88
TY1B-DR3Q99231 PUS2YGL063W 1113 nt20,54■□□□□ 0,88
TY1B-DR3Q99231 PUN1YLR414C 792 nt20,53■□□□□ 0,88
TY1B-DR3Q99231 MOT3YMR070W 1473 nt20,51■□□□□ 0,87
TY1B-DR3Q99231 RPP2BYDR382W 333 nt20,42■□□□□ 0,86
TY1B-DR3Q99231 YLR281CYLR281C 468 nt20,36■□□□□ 0,85
TY1B-DR3Q99231 BDH2YAL061W 1254 nt20,34■□□□□ 0,85
TY1B-DR3Q99231 WHI5YOR083W 888 nt20,29■□□□□ 0,84
TY1B-DR3Q99231 YLR236CYLR236C 324 nt20,29■□□□□ 0,84
TY1B-DR3Q99231 PTC2YER089C 1395 nt20,24■□□□□ 0,83
TY1B-DR3Q99231 POA1YBR022W 534 nt20,18■□□□□ 0,82
TY1B-DR3Q99231 YPR011CYPR011C 981 nt20,18■□□□□ 0,82
TY1B-DR3Q99231 FMP45YDL222C 930 nt20,17■□□□□ 0,82
TY1B-DR3Q99231 BUD23YCR047C 828 nt20,14■□□□□ 0,81
TY1B-DR3Q99231 BSC6YOL137W 1494 nt20,12■□□□□ 0,81
TY1B-DR3Q99231 FIS1YIL065C 468 nt20,08■□□□□ 0,8
TY1B-DR3Q99231 YBL100CYBL100C 315 nt20,02■□□□□ 0,8
TY1B-DR3Q99231 DSK2YMR276W 1122 nt19,94■□□□□ 0,78
TY1B-DR3Q99231 PHO4YFR034C 939 nt19,85■□□□□ 0,77
TY1B-DR3Q99231 LPX1YOR084W 1164 nt19,83■□□□□ 0,77
TY1B-DR3Q99231 YLR154C-GYLR154C-G 150 nt19,83■□□□□ 0,76
TY1B-DR3Q99231 NAB2YGL122C 1578 nt19,82■□□□□ 0,76
TY1B-DR3Q99231 FPR4YLR449W 1179 nt19,82■□□□□ 0,76
TY1B-DR3Q99231 LSM3YLR438C-A 270 nt19,8■□□□□ 0,76
TY1B-DR3Q99231 SPP1YPL138C 1062 nt19,73■□□□□ 0,75
TY1B-DR3Q99231 YCH1YGR203W 447 nt19,71■□□□□ 0,75
TY1B-DR3Q99231 RTG1YOL067C 534 nt19,68■□□□□ 0,74
TY1B-DR3Q99231 DAL1YIR027C 1383 nt19,68■□□□□ 0,74
TY1B-DR3Q99231 UBX6YJL048C 1191 nt19,63■□□□□ 0,73
TY1B-DR3Q99231 MRPL8YJL063C 717 nt19,62■□□□□ 0,73
Retrieved 100 of 7,029 protein–RNA pairs in 12,3 ms