Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YML009W-BYML009W-B 477 nt36.39■■■■□ 3.42
SSN2P38931 NSR1YGR159C 1245 nt35.29■■■■□ 3.24
SSN2P38931 NOP1YDL014W 984 nt35.06■■■■□ 3.2
SSN2P38931 YKL036CYKL036C 393 nt32.96■■■□□ 2.87
SSN2P38931 MDJ1YFL016C 1536 nt31.52■■■□□ 2.64
SSN2P38931 YJL027CYJL027C 417 nt30.93■■■□□ 2.54
SSN2P38931 Q0297Q0297 156 nt30.92■■■□□ 2.54
SSN2P38931 SRX1YKL086W 384 nt30.8■■■□□ 2.52
SSN2P38931 SCS3YGL126W 1143 nt30.42■■■□□ 2.46
SSN2P38931 YCR051WYCR051W 669 nt29.45■■■□□ 2.3
SSN2P38931 YOL085CYOL085C 342 nt28.55■■■□□ 2.16
SSN2P38931 PKP1YIL042C 1185 nt28.39■■■□□ 2.14
SSN2P38931 DBP2YNL112W 1641 nt27.89■■■□□ 2.06
SSN2P38931 RPP1BYDL130W 321 nt27.8■■■□□ 2.04
SSN2P38931 TRN1tP(UGG)A 72 nt27.74■■■□□ 2.03
SSN2P38931 SUF9tP(UGG)F 72 nt27.74■■■□□ 2.03
SSN2P38931 SUF8tP(UGG)H 72 nt27.74■■■□□ 2.03
SSN2P38931 tP(UGG)LtP(UGG)L 72 nt27.74■■■□□ 2.03
SSN2P38931 SUF7tP(UGG)M 72 nt27.74■■■□□ 2.03
SSN2P38931 tP(UGG)N1tP(UGG)N1 72 nt27.74■■■□□ 2.03
SSN2P38931 tP(UGG)N2tP(UGG)N2 72 nt27.74■■■□□ 2.03
SSN2P38931 tP(UGG)O1tP(UGG)O1 72 nt27.74■■■□□ 2.03
SSN2P38931 SUF11tP(UGG)O2 72 nt27.74■■■□□ 2.03
SSN2P38931 CCC1YLR220W 969 nt27.58■■■□□ 2
SSN2P38931 ATS1YAL020C 1002 nt27.15■■□□□ 1.94
SSN2P38931 SCJ1YMR214W 1134 nt26.99■■□□□ 1.91
SSN2P38931 PET122YER153C 765 nt26.77■■□□□ 1.88
SSN2P38931 tP(UGG)O3tP(UGG)O3 72 nt26.33■■□□□ 1.81
SSN2P38931 SCR1SCR1 522 nt26.31■■□□□ 1.8
SSN2P38931 YBR190WYBR190W 312 nt26.31■■□□□ 1.8
SSN2P38931 RVS167YDR388W 1449 nt26.1■■□□□ 1.77
SSN2P38931 RTC3YHR087W 336 nt25.96■■□□□ 1.75
SSN2P38931 RRN5YLR141W 1092 nt25.89■■□□□ 1.74
SSN2P38931 RSB1YOR049C 1065 nt25.6■■□□□ 1.69
SSN2P38931 YER088W-BYER088W-B 147 nt25.4■■□□□ 1.66
SSN2P38931 SHR5YOL110W 714 nt25.36■■□□□ 1.65
SSN2P38931 YDJ1YNL064C 1230 nt25.27■■□□□ 1.64
SSN2P38931 PST2YDR032C 597 nt25.01■■□□□ 1.59
SSN2P38931 GAR1YHR089C 618 nt24.94■■□□□ 1.58
SSN2P38931 DEP1YAL013W 1218 nt24.83■■□□□ 1.57
SSN2P38931 URN1YPR152C 1398 nt24.52■■□□□ 1.52
SSN2P38931 YKL097CYKL097C 411 nt24.36■■□□□ 1.49
SSN2P38931 SHU1YHL006C 453 nt24.12■■□□□ 1.45
SSN2P38931 YNL208WYNL208W 600 nt24.1■■□□□ 1.45
SSN2P38931 RPN10YHR200W 807 nt24.01■■□□□ 1.43
SSN2P38931 TIR1YER011W 765 nt23.98■■□□□ 1.43
SSN2P38931 OPI9YLR338W 858 nt23.9■■□□□ 1.42
SSN2P38931 SAH1YER043C 1350 nt23.84■■□□□ 1.41
SSN2P38931 YAL037C-BYAL037C-B 975 nt23.76■■□□□ 1.39
SSN2P38931 PUT4YOR348C 1884 nt23.72■■□□□ 1.39
SSN2P38931 SSA1YAL005C 1929 nt23.7■■□□□ 1.39
SSN2P38931 SRB2YHR041C 633 nt23.69■■□□□ 1.38
SSN2P38931 ARE1YCR048W 1833 nt23.5■■□□□ 1.35
SSN2P38931 YOR139CYOR139C 393 nt23.44■■□□□ 1.34
SSN2P38931 YHR049C-AYHR049C-A 297 nt23.35■■□□□ 1.33
SSN2P38931 YJR120WYJR120W 351 nt23.31■■□□□ 1.32
SSN2P38931 YJR018WYJR018W 363 nt23.3■■□□□ 1.32
SSN2P38931 MNP1YGL068W 585 nt23.26■■□□□ 1.31
SSN2P38931 WWM1YFL010C 636 nt23.16■■□□□ 1.3
SSN2P38931 PUN1YLR414C 792 nt23.16■■□□□ 1.3
SSN2P38931 POA1YBR022W 534 nt23.09■■□□□ 1.29
SSN2P38931 NPL3YDR432W 1245 nt23.04■■□□□ 1.28
SSN2P38931 HOM6YJR139C 1080 nt22.98■■□□□ 1.27
SSN2P38931 PTC2YER089C 1395 nt22.96■■□□□ 1.27
SSN2P38931 YGR021WYGR021W 873 nt22.88■■□□□ 1.25
SSN2P38931 RPP2BYDR382W 333 nt22.85■■□□□ 1.25
SSN2P38931 BUD23YCR047C 828 nt22.82■■□□□ 1.24
SSN2P38931 SSA3YBL075C 1950 nt22.65■■□□□ 1.22
SSN2P38931 RKM5YLR137W 1104 nt22.65■■□□□ 1.22
SSN2P38931 YOL037CYOL037C 354 nt22.64■■□□□ 1.21
SSN2P38931 BSC6YOL137W 1494 nt22.56■■□□□ 1.2
SSN2P38931 YFL021C-AYFL021C-A 855 nt22.53■■□□□ 1.2
SSN2P38931 BDH2YAL061W 1254 nt22.52■■□□□ 1.2
SSN2P38931 FIS1YIL065C 468 nt22.5■■□□□ 1.19
SSN2P38931 FPR4YLR449W 1179 nt22.48■■□□□ 1.19
SSN2P38931 NAB2YGL122C 1578 nt22.45■■□□□ 1.18
SSN2P38931 YBL100CYBL100C 315 nt22.36■■□□□ 1.17
SSN2P38931 tM(CAU)CtM(CAU)C 72 nt22.31■■□□□ 1.16
SSN2P38931 IMT4tM(CAU)E 72 nt22.31■■□□□ 1.16
SSN2P38931 IMT3tM(CAU)J3 72 nt22.31■■□□□ 1.16
SSN2P38931 IMT1tM(CAU)O1 72 nt22.31■■□□□ 1.16
SSN2P38931 IMT2tM(CAU)P 72 nt22.31■■□□□ 1.16
SSN2P38931 DAL1YIR027C 1383 nt22.31■■□□□ 1.16
SSN2P38931 PHO4YFR034C 939 nt22.27■■□□□ 1.16
SSN2P38931 INM2YDR287W 879 nt22.16■■□□□ 1.14
SSN2P38931 PUS2YGL063W 1113 nt22.11■■□□□ 1.13
SSN2P38931 LSM3YLR438C-A 270 nt22.08■■□□□ 1.13
SSN2P38931 YLR281CYLR281C 468 nt22.06■■□□□ 1.12
SSN2P38931 FUN26YAL022C 1554 nt22.05■■□□□ 1.12
SSN2P38931 WHI5YOR083W 888 nt22.02■■□□□ 1.12
SSN2P38931 TRM9YML014W 840 nt21.93■■□□□ 1.1
SSN2P38931 YLR236CYLR236C 324 nt21.84■■□□□ 1.09
SSN2P38931 YPR011CYPR011C 981 nt21.76■■□□□ 1.07
SSN2P38931 MOT3YMR070W 1473 nt21.75■■□□□ 1.07
SSN2P38931 CCT6YDR188W 1641 nt21.74■■□□□ 1.07
SSN2P38931 FMP45YDL222C 930 nt21.7■■□□□ 1.06
SSN2P38931 YLR154C-GYLR154C-G 150 nt21.67■■□□□ 1.06
SSN2P38931 ALF1YNL148C 765 nt21.63■■□□□ 1.05
SSN2P38931 DSK2YMR276W 1122 nt21.61■■□□□ 1.05
SSN2P38931 YPS1YLR120C 1710 nt21.54■■□□□ 1.04
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms