Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YML009W-BYML009W-B 477 nt36,39■■■■□ 3,42
SSN2P38931 NSR1YGR159C 1245 nt35,29■■■■□ 3,24
SSN2P38931 NOP1YDL014W 984 nt35,06■■■■□ 3,2
SSN2P38931 YKL036CYKL036C 393 nt32,96■■■□□ 2,87
SSN2P38931 MDJ1YFL016C 1536 nt31,52■■■□□ 2,64
SSN2P38931 YJL027CYJL027C 417 nt30,93■■■□□ 2,54
SSN2P38931 Q0297Q0297 156 nt30,92■■■□□ 2,54
SSN2P38931 SRX1YKL086W 384 nt30,8■■■□□ 2,52
SSN2P38931 SCS3YGL126W 1143 nt30,42■■■□□ 2,46
SSN2P38931 YCR051WYCR051W 669 nt29,45■■■□□ 2,3
SSN2P38931 YOL085CYOL085C 342 nt28,55■■■□□ 2,16
SSN2P38931 PKP1YIL042C 1185 nt28,39■■■□□ 2,14
SSN2P38931 DBP2YNL112W 1641 nt27,89■■■□□ 2,06
SSN2P38931 RPP1BYDL130W 321 nt27,8■■■□□ 2,04
SSN2P38931 TRN1tP(UGG)A 72 nt27,74■■■□□ 2,03
SSN2P38931 SUF9tP(UGG)F 72 nt27,74■■■□□ 2,03
SSN2P38931 SUF8tP(UGG)H 72 nt27,74■■■□□ 2,03
SSN2P38931 tP(UGG)LtP(UGG)L 72 nt27,74■■■□□ 2,03
SSN2P38931 SUF7tP(UGG)M 72 nt27,74■■■□□ 2,03
SSN2P38931 tP(UGG)N1tP(UGG)N1 72 nt27,74■■■□□ 2,03
SSN2P38931 tP(UGG)N2tP(UGG)N2 72 nt27,74■■■□□ 2,03
SSN2P38931 tP(UGG)O1tP(UGG)O1 72 nt27,74■■■□□ 2,03
SSN2P38931 SUF11tP(UGG)O2 72 nt27,74■■■□□ 2,03
SSN2P38931 CCC1YLR220W 969 nt27,58■■■□□ 2
SSN2P38931 ATS1YAL020C 1002 nt27,15■■□□□ 1,94
SSN2P38931 SCJ1YMR214W 1134 nt26,99■■□□□ 1,91
SSN2P38931 PET122YER153C 765 nt26,77■■□□□ 1,88
SSN2P38931 tP(UGG)O3tP(UGG)O3 72 nt26,33■■□□□ 1,81
SSN2P38931 SCR1SCR1 522 nt26,31■■□□□ 1,8
SSN2P38931 YBR190WYBR190W 312 nt26,31■■□□□ 1,8
SSN2P38931 RVS167YDR388W 1449 nt26,1■■□□□ 1,77
SSN2P38931 RTC3YHR087W 336 nt25,96■■□□□ 1,75
SSN2P38931 RRN5YLR141W 1092 nt25,89■■□□□ 1,74
SSN2P38931 RSB1YOR049C 1065 nt25,6■■□□□ 1,69
SSN2P38931 YER088W-BYER088W-B 147 nt25,4■■□□□ 1,66
SSN2P38931 SHR5YOL110W 714 nt25,36■■□□□ 1,65
SSN2P38931 YDJ1YNL064C 1230 nt25,27■■□□□ 1,64
SSN2P38931 PST2YDR032C 597 nt25,01■■□□□ 1,59
SSN2P38931 GAR1YHR089C 618 nt24,94■■□□□ 1,58
SSN2P38931 DEP1YAL013W 1218 nt24,83■■□□□ 1,57
SSN2P38931 URN1YPR152C 1398 nt24,52■■□□□ 1,52
SSN2P38931 YKL097CYKL097C 411 nt24,36■■□□□ 1,49
SSN2P38931 SHU1YHL006C 453 nt24,12■■□□□ 1,45
SSN2P38931 YNL208WYNL208W 600 nt24,1■■□□□ 1,45
SSN2P38931 RPN10YHR200W 807 nt24,01■■□□□ 1,43
SSN2P38931 TIR1YER011W 765 nt23,98■■□□□ 1,43
SSN2P38931 OPI9YLR338W 858 nt23,9■■□□□ 1,42
SSN2P38931 SAH1YER043C 1350 nt23,84■■□□□ 1,41
SSN2P38931 YAL037C-BYAL037C-B 975 nt23,76■■□□□ 1,39
SSN2P38931 PUT4YOR348C 1884 nt23,72■■□□□ 1,39
SSN2P38931 SSA1YAL005C 1929 nt23,7■■□□□ 1,39
SSN2P38931 SRB2YHR041C 633 nt23,69■■□□□ 1,38
SSN2P38931 ARE1YCR048W 1833 nt23,5■■□□□ 1,35
SSN2P38931 YOR139CYOR139C 393 nt23,44■■□□□ 1,34
SSN2P38931 YHR049C-AYHR049C-A 297 nt23,35■■□□□ 1,33
SSN2P38931 YJR120WYJR120W 351 nt23,31■■□□□ 1,32
SSN2P38931 YJR018WYJR018W 363 nt23,3■■□□□ 1,32
SSN2P38931 MNP1YGL068W 585 nt23,26■■□□□ 1,31
SSN2P38931 WWM1YFL010C 636 nt23,16■■□□□ 1,3
SSN2P38931 PUN1YLR414C 792 nt23,16■■□□□ 1,3
SSN2P38931 POA1YBR022W 534 nt23,09■■□□□ 1,29
SSN2P38931 NPL3YDR432W 1245 nt23,04■■□□□ 1,28
SSN2P38931 HOM6YJR139C 1080 nt22,98■■□□□ 1,27
SSN2P38931 PTC2YER089C 1395 nt22,96■■□□□ 1,27
SSN2P38931 YGR021WYGR021W 873 nt22,88■■□□□ 1,25
SSN2P38931 RPP2BYDR382W 333 nt22,85■■□□□ 1,25
SSN2P38931 BUD23YCR047C 828 nt22,82■■□□□ 1,24
SSN2P38931 SSA3YBL075C 1950 nt22,65■■□□□ 1,22
SSN2P38931 RKM5YLR137W 1104 nt22,65■■□□□ 1,22
SSN2P38931 YOL037CYOL037C 354 nt22,64■■□□□ 1,21
SSN2P38931 BSC6YOL137W 1494 nt22,56■■□□□ 1,2
SSN2P38931 YFL021C-AYFL021C-A 855 nt22,53■■□□□ 1,2
SSN2P38931 BDH2YAL061W 1254 nt22,52■■□□□ 1,2
SSN2P38931 FIS1YIL065C 468 nt22,5■■□□□ 1,19
SSN2P38931 FPR4YLR449W 1179 nt22,48■■□□□ 1,19
SSN2P38931 NAB2YGL122C 1578 nt22,45■■□□□ 1,18
SSN2P38931 YBL100CYBL100C 315 nt22,36■■□□□ 1,17
SSN2P38931 tM(CAU)CtM(CAU)C 72 nt22,31■■□□□ 1,16
SSN2P38931 IMT4tM(CAU)E 72 nt22,31■■□□□ 1,16
SSN2P38931 IMT3tM(CAU)J3 72 nt22,31■■□□□ 1,16
SSN2P38931 IMT1tM(CAU)O1 72 nt22,31■■□□□ 1,16
SSN2P38931 IMT2tM(CAU)P 72 nt22,31■■□□□ 1,16
SSN2P38931 DAL1YIR027C 1383 nt22,31■■□□□ 1,16
SSN2P38931 PHO4YFR034C 939 nt22,27■■□□□ 1,16
SSN2P38931 INM2YDR287W 879 nt22,16■■□□□ 1,14
SSN2P38931 PUS2YGL063W 1113 nt22,11■■□□□ 1,13
SSN2P38931 LSM3YLR438C-A 270 nt22,08■■□□□ 1,13
SSN2P38931 YLR281CYLR281C 468 nt22,06■■□□□ 1,12
SSN2P38931 FUN26YAL022C 1554 nt22,05■■□□□ 1,12
SSN2P38931 WHI5YOR083W 888 nt22,02■■□□□ 1,12
SSN2P38931 TRM9YML014W 840 nt21,93■■□□□ 1,1
SSN2P38931 YLR236CYLR236C 324 nt21,84■■□□□ 1,09
SSN2P38931 YPR011CYPR011C 981 nt21,76■■□□□ 1,07
SSN2P38931 MOT3YMR070W 1473 nt21,75■■□□□ 1,07
SSN2P38931 CCT6YDR188W 1641 nt21,74■■□□□ 1,07
SSN2P38931 FMP45YDL222C 930 nt21,7■■□□□ 1,06
SSN2P38931 YLR154C-GYLR154C-G 150 nt21,67■■□□□ 1,06
SSN2P38931 ALF1YNL148C 765 nt21,63■■□□□ 1,05
SSN2P38931 DSK2YMR276W 1122 nt21,61■■□□□ 1,05
SSN2P38931 YPS1YLR120C 1710 nt21,54■■□□□ 1,04
Retrieved 100 of 7,029 protein–RNA pairs in 10 ms