Protein–RNA interactions for Protein: P32828

SLX5, E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX5, yeastyeast

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLX5P32828 YML009W-BYML009W-B 477 nt20.27■□□□□ 0.84
SLX5P32828 NSR1YGR159C 1245 nt19.87■□□□□ 0.77
SLX5P32828 NOP1YDL014W 984 nt19.82■□□□□ 0.76
SLX5P32828 YKL036CYKL036C 393 nt18.61■□□□□ 0.57
SLX5P32828 YGR139WYGR139W 339 nt18.26■□□□□ 0.51
SLX5P32828 VAR1Q0140 1197 nt17.73■□□□□ 0.43
SLX5P32828 Q0297Q0297 156 nt17.48■□□□□ 0.39
SLX5P32828 YJL027CYJL027C 417 nt17.42■□□□□ 0.38
SLX5P32828 MDJ1YFL016C 1536 nt17.38■□□□□ 0.37
SLX5P32828 SRX1YKL086W 384 nt17.34■□□□□ 0.37
SLX5P32828 SCS3YGL126W 1143 nt17.1■□□□□ 0.33
SLX5P32828 YDR509WYDR509W 348 nt16.61■□□□□ 0.25
SLX5P32828 YCR051WYCR051W 669 nt16.47■□□□□ 0.23
SLX5P32828 Q0017Q0017 162 nt16.25■□□□□ 0.19
SLX5P32828 NME1NME1 340 nt16.18■□□□□ 0.18
SLX5P32828 CSM2YIL132C 642 nt16.14■□□□□ 0.17
SLX5P32828 YOL085CYOL085C 342 nt16.11■□□□□ 0.17
SLX5P32828 Q0142Q0142 177 nt16.1■□□□□ 0.17
SLX5P32828 PAM17YKR065C 594 nt16.07■□□□□ 0.16
SLX5P32828 PAU21YOR394W 495 nt16.03■□□□□ 0.16
SLX5P32828 PAU22YPL282C 495 nt16.03■□□□□ 0.16
SLX5P32828 Q0144Q0144 330 nt15.95■□□□□ 0.14
SLX5P32828 ARO7YPR060C 771 nt15.88■□□□□ 0.13
SLX5P32828 PKP1YIL042C 1185 nt15.83■□□□□ 0.12
SLX5P32828 MOT3YMR070W 1473 nt15.79■□□□□ 0.12
SLX5P32828 BMT5YIL096C 1011 nt15.69■□□□□ 0.1
SLX5P32828 RPP1BYDL130W 321 nt15.68■□□□□ 0.1
SLX5P32828 REG2YBR050C 1017 nt15.64■□□□□ 0.09
SLX5P32828 BUR6YER159C 429 nt15.62■□□□□ 0.09
SLX5P32828 SEM1YDR363W-A 270 nt15.61■□□□□ 0.09
SLX5P32828 Q0182Q0182 405 nt15.57■□□□□ 0.08
SLX5P32828 SCJ1YMR214W 1134 nt15.54■□□□□ 0.08
SLX5P32828 TRN1tP(UGG)A 72 nt15.49■□□□□ 0.07
SLX5P32828 SUF9tP(UGG)F 72 nt15.49■□□□□ 0.07
SLX5P32828 SUF8tP(UGG)H 72 nt15.49■□□□□ 0.07
SLX5P32828 tP(UGG)LtP(UGG)L 72 nt15.49■□□□□ 0.07
SLX5P32828 SUF7tP(UGG)M 72 nt15.49■□□□□ 0.07
SLX5P32828 tP(UGG)N1tP(UGG)N1 72 nt15.49■□□□□ 0.07
SLX5P32828 tP(UGG)N2tP(UGG)N2 72 nt15.49■□□□□ 0.07
SLX5P32828 tP(UGG)O1tP(UGG)O1 72 nt15.49■□□□□ 0.07
SLX5P32828 SUF11tP(UGG)O2 72 nt15.49■□□□□ 0.07
SLX5P32828 DBP2YNL112W 1641 nt15.49■□□□□ 0.07
SLX5P32828 ATS1YAL020C 1002 nt15.39■□□□□ 0.05
SLX5P32828 Q0255Q0255 1419 nt15.39■□□□□ 0.05
SLX5P32828 CCC1YLR220W 969 nt15.34■□□□□ 0.05
SLX5P32828 AI5_BETAQ0075 1065 nt15.28■□□□□ 0.04
SLX5P32828 YOR169CYOR169C 465 nt15.28■□□□□ 0.04
SLX5P32828 Q0010Q0010 387 nt15.26■□□□□ 0.03
SLX5P32828 YGL188CYGL188C 174 nt15.23■□□□□ 0.03
SLX5P32828 YIR018C-AYIR018C-A 138 nt15.2■□□□□ 0.02
SLX5P32828 AI3Q0060 1248 nt15.15■□□□□ 0.02
SLX5P32828 SRN2YLR119W 642 nt15.13■□□□□ 0.01
SLX5P32828 YCR099CYCR099C 468 nt15□□□□□ -0.01
SLX5P32828 PET122YER153C 765 nt14.95□□□□□ -0.02
SLX5P32828 ATP6Q0085 780 nt14.88□□□□□ -0.03
SLX5P32828 SCR1SCR1 522 nt14.86□□□□□ -0.03
SLX5P32828 YBR190WYBR190W 312 nt14.86□□□□□ -0.03
SLX5P32828 ARP10YDR106W 855 nt14.84□□□□□ -0.03
SLX5P32828 tP(UGG)O3tP(UGG)O3 72 nt14.76□□□□□ -0.05
SLX5P32828 AIR1YIL079C 1083 nt14.74□□□□□ -0.05
SLX5P32828 PET20YPL159C 762 nt14.71□□□□□ -0.05
SLX5P32828 ARA2YMR041C 1008 nt14.64□□□□□ -0.07
SLX5P32828 SSA3YBL075C 1950 nt14.62□□□□□ -0.07
SLX5P32828 RVS167YDR388W 1449 nt14.6□□□□□ -0.07
SLX5P32828 RRN5YLR141W 1092 nt14.56□□□□□ -0.08
SLX5P32828 RTC3YHR087W 336 nt14.54□□□□□ -0.08
SLX5P32828 YNR068CYNR068C 819 nt14.49□□□□□ -0.09
SLX5P32828 snR78snR78 87 nt14.44□□□□□ -0.1
SLX5P32828 KTR3YBR205W 1215 nt14.44□□□□□ -0.1
SLX5P32828 YPL168WYPL168W 1293 nt14.36□□□□□ -0.11
SLX5P32828 YLR122CYLR122C 378 nt14.34□□□□□ -0.11
SLX5P32828 ABZ2YMR289W 1125 nt14.34□□□□□ -0.11
SLX5P32828 RSB1YOR049C 1065 nt14.34□□□□□ -0.11
SLX5P32828 UTP6YDR449C 1323 nt14.32□□□□□ -0.12
SLX5P32828 PHO92YDR374C 921 nt14.3□□□□□ -0.12
SLX5P32828 NEM1YHR004C 1341 nt14.3□□□□□ -0.12
SLX5P32828 SKG1YKR100C 1068 nt14.28□□□□□ -0.12
SLX5P32828 YER088W-BYER088W-B 147 nt14.27□□□□□ -0.13
SLX5P32828 YDJ1YNL064C 1230 nt14.27□□□□□ -0.13
SLX5P32828 YEL009C-AYEL009C-A 408 nt14.22□□□□□ -0.13
SLX5P32828 PST2YDR032C 597 nt14.2□□□□□ -0.14
SLX5P32828 SHR5YOL110W 714 nt14.18□□□□□ -0.14
SLX5P32828 YHL044WYHL044W 708 nt14.13□□□□□ -0.15
SLX5P32828 AST1YBL069W 1290 nt14.09□□□□□ -0.15
SLX5P32828 RPM1RPM1 483 nt14.02□□□□□ -0.17
SLX5P32828 STD1YOR047C 1335 nt13.99□□□□□ -0.17
SLX5P32828 URE2YNL229C 1065 nt13.95□□□□□ -0.18
SLX5P32828 GAR1YHR089C 618 nt13.91□□□□□ -0.18
SLX5P32828 YMR119W-AYMR119W-A 375 nt13.91□□□□□ -0.18
SLX5P32828 PEX27YOR193W 1131 nt13.89□□□□□ -0.19
SLX5P32828 YAL016C-BYAL016C-B 186 nt13.88□□□□□ -0.19
SLX5P32828 FAR3YMR052W 615 nt13.86□□□□□ -0.19
SLX5P32828 TOM20YGR082W 552 nt13.85□□□□□ -0.19
SLX5P32828 YDR008CYDR008C 351 nt13.83□□□□□ -0.2
SLX5P32828 YPL071CYPL071C 471 nt13.83□□□□□ -0.2
SLX5P32828 YKL097CYKL097C 411 nt13.8□□□□□ -0.2
SLX5P32828 GTT3YEL017W 1014 nt13.77□□□□□ -0.21
SLX5P32828 HMT1YBR034C 1047 nt13.75□□□□□ -0.21
SLX5P32828 FTR1YER145C 1215 nt13.74□□□□□ -0.21
SLX5P32828 PUT4YOR348C 1884 nt13.72□□□□□ -0.21
Retrieved 100 of 7,029 protein–RNA pairs in 55.9 ms