Protein–RNA interactions for Protein: P32319

PEP1, Vacuolar protein sorting/targeting protein VPS10, yeastyeast

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP1P32319 YML009W-BYML009W-B 477 nt35.04■■■■□ 3.2
PEP1P32319 NOP1YDL014W 984 nt33.88■■■■□ 3.01
PEP1P32319 NSR1YGR159C 1245 nt33.26■■■□□ 2.92
PEP1P32319 YKL036CYKL036C 393 nt32.55■■■□□ 2.8
PEP1P32319 YJL027CYJL027C 417 nt30.64■■■□□ 2.5
PEP1P32319 SCS3YGL126W 1143 nt30.41■■■□□ 2.46
PEP1P32319 Q0297Q0297 156 nt30.14■■■□□ 2.42
PEP1P32319 SRX1YKL086W 384 nt29.86■■■□□ 2.37
PEP1P32319 MDJ1YFL016C 1536 nt29.21■■■□□ 2.27
PEP1P32319 YCR051WYCR051W 669 nt28.6■■■□□ 2.17
PEP1P32319 YOL085CYOL085C 342 nt28.1■■■□□ 2.09
PEP1P32319 PKP1YIL042C 1185 nt27.94■■■□□ 2.06
PEP1P32319 SCJ1YMR214W 1134 nt27.73■■■□□ 2.03
PEP1P32319 ATS1YAL020C 1002 nt27.23■■□□□ 1.95
PEP1P32319 RPP1BYDL130W 321 nt27.09■■□□□ 1.93
PEP1P32319 TRN1tP(UGG)A 72 nt26.51■■□□□ 1.83
PEP1P32319 SUF9tP(UGG)F 72 nt26.51■■□□□ 1.83
PEP1P32319 SUF8tP(UGG)H 72 nt26.51■■□□□ 1.83
PEP1P32319 tP(UGG)LtP(UGG)L 72 nt26.51■■□□□ 1.83
PEP1P32319 SUF7tP(UGG)M 72 nt26.51■■□□□ 1.83
PEP1P32319 tP(UGG)N1tP(UGG)N1 72 nt26.51■■□□□ 1.83
PEP1P32319 tP(UGG)N2tP(UGG)N2 72 nt26.51■■□□□ 1.83
PEP1P32319 tP(UGG)O1tP(UGG)O1 72 nt26.51■■□□□ 1.83
PEP1P32319 SUF11tP(UGG)O2 72 nt26.51■■□□□ 1.83
PEP1P32319 CCC1YLR220W 969 nt26.33■■□□□ 1.81
PEP1P32319 DBP2YNL112W 1641 nt26.08■■□□□ 1.77
PEP1P32319 PET122YER153C 765 nt26.07■■□□□ 1.76
PEP1P32319 SCR1SCR1 522 nt25.77■■□□□ 1.72
PEP1P32319 RTC3YHR087W 336 nt25.65■■□□□ 1.7
PEP1P32319 tP(UGG)O3tP(UGG)O3 72 nt25.35■■□□□ 1.65
PEP1P32319 RRN5YLR141W 1092 nt25.21■■□□□ 1.63
PEP1P32319 RSB1YOR049C 1065 nt25.19■■□□□ 1.62
PEP1P32319 PST2YDR032C 597 nt24.97■■□□□ 1.59
PEP1P32319 YER088W-BYER088W-B 147 nt24.75■■□□□ 1.55
PEP1P32319 YKL097CYKL097C 411 nt24.75■■□□□ 1.55
PEP1P32319 RVS167YDR388W 1449 nt24.54■■□□□ 1.52
PEP1P32319 YDJ1YNL064C 1230 nt24.28■■□□□ 1.48
PEP1P32319 YBR190WYBR190W 312 nt24.11■■□□□ 1.45
PEP1P32319 SHR5YOL110W 714 nt24.01■■□□□ 1.43
PEP1P32319 SHU1YHL006C 453 nt23.99■■□□□ 1.43
PEP1P32319 GAR1YHR089C 618 nt23.89■■□□□ 1.41
PEP1P32319 YOR139CYOR139C 393 nt23.68■■□□□ 1.38
PEP1P32319 YAL037C-BYAL037C-B 975 nt23.48■■□□□ 1.35
PEP1P32319 DEP1YAL013W 1218 nt23.34■■□□□ 1.33
PEP1P32319 NPL3YDR432W 1245 nt23.14■■□□□ 1.29
PEP1P32319 TIR1YER011W 765 nt22.94■■□□□ 1.26
PEP1P32319 URN1YPR152C 1398 nt22.84■■□□□ 1.25
PEP1P32319 MNP1YGL068W 585 nt22.8■■□□□ 1.24
PEP1P32319 SRB2YHR041C 633 nt22.71■■□□□ 1.23
PEP1P32319 YNL208WYNL208W 600 nt22.63■■□□□ 1.21
PEP1P32319 SSA1YAL005C 1929 nt22.55■■□□□ 1.2
PEP1P32319 RPN10YHR200W 807 nt22.49■■□□□ 1.19
PEP1P32319 tM(CAU)CtM(CAU)C 72 nt22.42■■□□□ 1.18
PEP1P32319 IMT4tM(CAU)E 72 nt22.42■■□□□ 1.18
PEP1P32319 IMT3tM(CAU)J3 72 nt22.42■■□□□ 1.18
PEP1P32319 IMT1tM(CAU)O1 72 nt22.42■■□□□ 1.18
PEP1P32319 IMT2tM(CAU)P 72 nt22.42■■□□□ 1.18
PEP1P32319 YOL037CYOL037C 354 nt22.4■■□□□ 1.18
PEP1P32319 HOM6YJR139C 1080 nt22.35■■□□□ 1.17
PEP1P32319 WWM1YFL010C 636 nt22.32■■□□□ 1.16
PEP1P32319 YGR021WYGR021W 873 nt22.21■■□□□ 1.15
PEP1P32319 MOT3YMR070W 1473 nt22.18■■□□□ 1.14
PEP1P32319 BSC6YOL137W 1494 nt22.07■■□□□ 1.12
PEP1P32319 OPI9YLR338W 858 nt22.05■■□□□ 1.12
PEP1P32319 RKM5YLR137W 1104 nt22.01■■□□□ 1.11
PEP1P32319 PUS2YGL063W 1113 nt22■■□□□ 1.11
PEP1P32319 YJR120WYJR120W 351 nt21.92■■□□□ 1.1
PEP1P32319 SAH1YER043C 1350 nt21.9■■□□□ 1.1
PEP1P32319 YLR281CYLR281C 468 nt21.74■■□□□ 1.07
PEP1P32319 YJR018WYJR018W 363 nt21.71■■□□□ 1.07
PEP1P32319 YFL021C-AYFL021C-A 855 nt21.67■■□□□ 1.06
PEP1P32319 FMP45YDL222C 930 nt21.61■■□□□ 1.05
PEP1P32319 WHI5YOR083W 888 nt21.6■■□□□ 1.05
PEP1P32319 YLR236CYLR236C 324 nt21.54■■□□□ 1.04
PEP1P32319 SSA3YBL075C 1950 nt21.54■■□□□ 1.04
PEP1P32319 YPR011CYPR011C 981 nt21.47■■□□□ 1.03
PEP1P32319 RPP2BYDR382W 333 nt21.46■■□□□ 1.03
PEP1P32319 UBX6YJL048C 1191 nt21.44■■□□□ 1.02
PEP1P32319 PUN1YLR414C 792 nt21.37■■□□□ 1.01
PEP1P32319 MRPL8YJL063C 717 nt21.31■■□□□ 1
PEP1P32319 BDH2YAL061W 1254 nt21.3■■□□□ 1
PEP1P32319 ARE1YCR048W 1833 nt21.29■■□□□ 1
PEP1P32319 DSK2YMR276W 1122 nt21.28■■□□□ 1
PEP1P32319 PUT4YOR348C 1884 nt21.23■□□□□ 0.99
PEP1P32319 YHR049C-AYHR049C-A 297 nt21.23■□□□□ 0.99
PEP1P32319 YCH1YGR203W 447 nt21.2■□□□□ 0.98
PEP1P32319 SPP1YPL138C 1062 nt21.1■□□□□ 0.97
PEP1P32319 YEL076C-AYEL076C-A 651 nt21.06■□□□□ 0.96
PEP1P32319 YEL076CYEL076C 651 nt21.06■□□□□ 0.96
PEP1P32319 YLR464WYLR464W 651 nt21.06■□□□□ 0.96
PEP1P32319 PTC2YER089C 1395 nt21.06■□□□□ 0.96
PEP1P32319 LPX1YOR084W 1164 nt21.05■□□□□ 0.96
PEP1P32319 ADO1YJR105W 1023 nt21.01■□□□□ 0.95
PEP1P32319 RTG1YOL067C 534 nt20.97■□□□□ 0.95
PEP1P32319 LSM3YLR438C-A 270 nt20.91■□□□□ 0.94
PEP1P32319 YBL100CYBL100C 315 nt20.89■□□□□ 0.94
PEP1P32319 YLR154C-GYLR154C-G 150 nt20.88■□□□□ 0.93
PEP1P32319 IMP2'YIL154C 1041 nt20.83■□□□□ 0.92
PEP1P32319 BUD23YCR047C 828 nt20.77■□□□□ 0.92
PEP1P32319 POA1YBR022W 534 nt20.75■□□□□ 0.91
Retrieved 100 of 7,029 protein–RNA pairs in 1344 ms