Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 NSR1YGR159C 1245 nt25.14■■□□□ 1.62
TFA1P36100 YML009W-BYML009W-B 477 nt24.96■■□□□ 1.59
TFA1P36100 Q0182Q0182 405 nt24.57■■□□□ 1.52
TFA1P36100 NOP1YDL014W 984 nt24.34■■□□□ 1.49
TFA1P36100 MOT3YMR070W 1473 nt24.26■■□□□ 1.47
TFA1P36100 MDJ1YFL016C 1536 nt22.52■■□□□ 1.19
TFA1P36100 YKL036CYKL036C 393 nt22.3■■□□□ 1.16
TFA1P36100 Q0297Q0297 156 nt21.33■■□□□ 1.01
TFA1P36100 SRX1YKL086W 384 nt21.3■■□□□ 1
TFA1P36100 NME1NME1 340 nt21.12■□□□□ 0.97
TFA1P36100 YGR139WYGR139W 339 nt20.73■□□□□ 0.91
TFA1P36100 YJL027CYJL027C 417 nt20.72■□□□□ 0.91
TFA1P36100 SCS3YGL126W 1143 nt20.18■□□□□ 0.82
TFA1P36100 YCR051WYCR051W 669 nt20.02■□□□□ 0.8
TFA1P36100 DBP2YNL112W 1641 nt19.77■□□□□ 0.76
TFA1P36100 TRN1tP(UGG)A 72 nt19.35■□□□□ 0.69
TFA1P36100 SUF9tP(UGG)F 72 nt19.35■□□□□ 0.69
TFA1P36100 SUF8tP(UGG)H 72 nt19.35■□□□□ 0.69
TFA1P36100 tP(UGG)LtP(UGG)L 72 nt19.35■□□□□ 0.69
TFA1P36100 SUF7tP(UGG)M 72 nt19.35■□□□□ 0.69
TFA1P36100 tP(UGG)N1tP(UGG)N1 72 nt19.35■□□□□ 0.69
TFA1P36100 tP(UGG)N2tP(UGG)N2 72 nt19.35■□□□□ 0.69
TFA1P36100 tP(UGG)O1tP(UGG)O1 72 nt19.35■□□□□ 0.69
TFA1P36100 SUF11tP(UGG)O2 72 nt19.35■□□□□ 0.69
TFA1P36100 CSM2YIL132C 642 nt19.33■□□□□ 0.68
TFA1P36100 YBR190WYBR190W 312 nt19.33■□□□□ 0.68
TFA1P36100 YOL085CYOL085C 342 nt19.31■□□□□ 0.68
TFA1P36100 RPP1BYDL130W 321 nt19.08■□□□□ 0.64
TFA1P36100 RTC3YHR087W 336 nt19.03■□□□□ 0.64
TFA1P36100 CCC1YLR220W 969 nt18.92■□□□□ 0.62
TFA1P36100 PKP1YIL042C 1185 nt18.87■□□□□ 0.61
TFA1P36100 SSA3YBL075C 1950 nt18.77■□□□□ 0.59
TFA1P36100 PAU21YOR394W 495 nt18.74■□□□□ 0.59
TFA1P36100 PAU22YPL282C 495 nt18.74■□□□□ 0.59
TFA1P36100 MET8YBR213W 825 nt18.6■□□□□ 0.57
TFA1P36100 RVS167YDR388W 1449 nt18.52■□□□□ 0.56
TFA1P36100 CLB6YGR109C 1143 nt18.51■□□□□ 0.55
TFA1P36100 ARO7YPR060C 771 nt18.5■□□□□ 0.55
TFA1P36100 SCJ1YMR214W 1134 nt18.38■□□□□ 0.53
TFA1P36100 SSA1YAL005C 1929 nt18.25■□□□□ 0.51
TFA1P36100 tP(UGG)O3tP(UGG)O3 72 nt18.2■□□□□ 0.5
TFA1P36100 PET122YER153C 765 nt18.18■□□□□ 0.5
TFA1P36100 PUT4YOR348C 1884 nt18.09■□□□□ 0.49
TFA1P36100 ATS1YAL020C 1002 nt18.03■□□□□ 0.48
TFA1P36100 SCR1SCR1 522 nt17.97■□□□□ 0.47
TFA1P36100 SHR5YOL110W 714 nt17.89■□□□□ 0.45
TFA1P36100 REG2YBR050C 1017 nt17.8■□□□□ 0.44
TFA1P36100 YEL009C-AYEL009C-A 408 nt17.79■□□□□ 0.44
TFA1P36100 YDJ1YNL064C 1230 nt17.72■□□□□ 0.43
TFA1P36100 Q0010Q0010 387 nt17.69■□□□□ 0.42
TFA1P36100 YJR154WYJR154W 1041 nt17.68■□□□□ 0.42
TFA1P36100 RRN5YLR141W 1092 nt17.63■□□□□ 0.41
TFA1P36100 POA1YBR022W 534 nt17.59■□□□□ 0.41
TFA1P36100 ARE1YCR048W 1833 nt17.55■□□□□ 0.4
TFA1P36100 URN1YPR152C 1398 nt17.44■□□□□ 0.38
TFA1P36100 SAH1YER043C 1350 nt17.43■□□□□ 0.38
TFA1P36100 YHR049C-AYHR049C-A 297 nt17.43■□□□□ 0.38
TFA1P36100 ARA2YMR041C 1008 nt17.43■□□□□ 0.38
TFA1P36100 PAM17YKR065C 594 nt17.4■□□□□ 0.38
TFA1P36100 YLR122CYLR122C 378 nt17.35■□□□□ 0.37
TFA1P36100 FRE6YLL051C 2139 nt17.34■□□□□ 0.37
TFA1P36100 BSC6YOL137W 1494 nt17.31■□□□□ 0.36
TFA1P36100 YER088W-BYER088W-B 147 nt17.31■□□□□ 0.36
TFA1P36100 DEP1YAL013W 1218 nt17.28■□□□□ 0.36
TFA1P36100 URH1YDR400W 1023 nt17.27■□□□□ 0.36
TFA1P36100 OPI9YLR338W 858 nt17.27■□□□□ 0.36
TFA1P36100 LCP5YER127W 1074 nt17.26■□□□□ 0.35
TFA1P36100 PAB1YER165W 1734 nt17.21■□□□□ 0.35
TFA1P36100 RPN10YHR200W 807 nt17.17■□□□□ 0.34
TFA1P36100 RSB1YOR049C 1065 nt17.16■□□□□ 0.34
TFA1P36100 GAR1YHR089C 618 nt17.14■□□□□ 0.33
TFA1P36100 TOM20YGR082W 552 nt17.13■□□□□ 0.33
TFA1P36100 YNL208WYNL208W 600 nt17.12■□□□□ 0.33
TFA1P36100 BUD23YCR047C 828 nt17.05■□□□□ 0.32
TFA1P36100 AI5_BETAQ0075 1065 nt17.05■□□□□ 0.32
TFA1P36100 ABZ2YMR289W 1125 nt16.98■□□□□ 0.31
TFA1P36100 YJL118WYJL118W 660 nt16.93■□□□□ 0.3
TFA1P36100 BUR6YER159C 429 nt16.86■□□□□ 0.29
TFA1P36100 SPT5YML010W 3192 nt16.83■□□□□ 0.28
TFA1P36100 PUN1YLR414C 792 nt16.79■□□□□ 0.28
TFA1P36100 SSA4YER103W 1929 nt16.78■□□□□ 0.28
TFA1P36100 PST2YDR032C 597 nt16.78■□□□□ 0.28
TFA1P36100 COG1YGL223C 1254 nt16.78■□□□□ 0.28
TFA1P36100 PTC2YER089C 1395 nt16.77■□□□□ 0.27
TFA1P36100 YPL041CYPL041C 624 nt16.69■□□□□ 0.26
TFA1P36100 TIR1YER011W 765 nt16.65■□□□□ 0.26
TFA1P36100 FTH1YBR207W 1398 nt16.64■□□□□ 0.26
TFA1P36100 RPM1RPM1 483 nt16.64■□□□□ 0.25
TFA1P36100 YJR018WYJR018W 363 nt16.62■□□□□ 0.25
TFA1P36100 NAB2YGL122C 1578 nt16.61■□□□□ 0.25
TFA1P36100 SRN2YLR119W 642 nt16.61■□□□□ 0.25
TFA1P36100 YMR057CYMR057C 372 nt16.6■□□□□ 0.25
TFA1P36100 YIR018C-AYIR018C-A 138 nt16.57■□□□□ 0.24
TFA1P36100 YNL067W-AYNL067W-A 147 nt16.56■□□□□ 0.24
TFA1P36100 BMT5YIL096C 1011 nt16.5■□□□□ 0.23
TFA1P36100 YDR510C-AYDR510C-A 117 nt16.49■□□□□ 0.23
TFA1P36100 YHM2YMR241W 945 nt16.47■□□□□ 0.23
TFA1P36100 HMT1YBR034C 1047 nt16.4■□□□□ 0.22
TFA1P36100 YTH1YPR107C 627 nt16.39■□□□□ 0.21
TFA1P36100 RSC4YKR008W 1878 nt16.39■□□□□ 0.21
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms