Protein–RNA interactions for Protein: P39109

YCF1, Metal resistance protein YCF1, yeastyeast

Known RBP Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCF1P39109 YML009W-BYML009W-B 477 nt33.62■■■□□ 2.97
YCF1P39109 NOP1YDL014W 984 nt32.67■■■□□ 2.82
YCF1P39109 NSR1YGR159C 1245 nt32.09■■■□□ 2.73
YCF1P39109 YKL036CYKL036C 393 nt31.42■■■□□ 2.62
YCF1P39109 YJL027CYJL027C 417 nt29.55■■■□□ 2.32
YCF1P39109 SCS3YGL126W 1143 nt29.35■■■□□ 2.29
YCF1P39109 Q0297Q0297 156 nt29.07■■■□□ 2.24
YCF1P39109 SRX1YKL086W 384 nt28.75■■■□□ 2.19
YCF1P39109 MDJ1YFL016C 1536 nt28.34■■■□□ 2.13
YCF1P39109 YCR051WYCR051W 669 nt27.47■■□□□ 1.99
YCF1P39109 YOL085CYOL085C 342 nt27.09■■□□□ 1.93
YCF1P39109 SCJ1YMR214W 1134 nt27.01■■□□□ 1.91
YCF1P39109 PKP1YIL042C 1185 nt26.83■■□□□ 1.89
YCF1P39109 ATS1YAL020C 1002 nt26.33■■□□□ 1.81
YCF1P39109 RPP1BYDL130W 321 nt26.11■■□□□ 1.77
YCF1P39109 TRN1tP(UGG)A 72 nt25.46■■□□□ 1.67
YCF1P39109 SUF9tP(UGG)F 72 nt25.46■■□□□ 1.67
YCF1P39109 SUF8tP(UGG)H 72 nt25.46■■□□□ 1.67
YCF1P39109 tP(UGG)LtP(UGG)L 72 nt25.46■■□□□ 1.67
YCF1P39109 SUF7tP(UGG)M 72 nt25.46■■□□□ 1.67
YCF1P39109 tP(UGG)N1tP(UGG)N1 72 nt25.46■■□□□ 1.67
YCF1P39109 tP(UGG)N2tP(UGG)N2 72 nt25.46■■□□□ 1.67
YCF1P39109 tP(UGG)O1tP(UGG)O1 72 nt25.46■■□□□ 1.67
YCF1P39109 SUF11tP(UGG)O2 72 nt25.46■■□□□ 1.67
YCF1P39109 CCC1YLR220W 969 nt25.26■■□□□ 1.63
YCF1P39109 DBP2YNL112W 1641 nt25.22■■□□□ 1.63
YCF1P39109 PET122YER153C 765 nt25.04■■□□□ 1.6
YCF1P39109 SCR1SCR1 522 nt24.87■■□□□ 1.57
YCF1P39109 RTC3YHR087W 336 nt24.84■■□□□ 1.57
YCF1P39109 tP(UGG)O3tP(UGG)O3 72 nt24.35■■□□□ 1.49
YCF1P39109 RSB1YOR049C 1065 nt24.25■■□□□ 1.47
YCF1P39109 RRN5YLR141W 1092 nt24.23■■□□□ 1.47
YCF1P39109 PST2YDR032C 597 nt24.14■■□□□ 1.45
YCF1P39109 YKL097CYKL097C 411 nt23.96■■□□□ 1.43
YCF1P39109 YER088W-BYER088W-B 147 nt23.79■■□□□ 1.4
YCF1P39109 RVS167YDR388W 1449 nt23.7■■□□□ 1.38
YCF1P39109 YBR190WYBR190W 312 nt23.5■■□□□ 1.35
YCF1P39109 YDJ1YNL064C 1230 nt23.41■■□□□ 1.34
YCF1P39109 SHR5YOL110W 714 nt23.13■■□□□ 1.29
YCF1P39109 SHU1YHL006C 453 nt23.11■■□□□ 1.29
YCF1P39109 GAR1YHR089C 618 nt22.9■■□□□ 1.26
YCF1P39109 YOR139CYOR139C 393 nt22.86■■□□□ 1.25
YCF1P39109 DEP1YAL013W 1218 nt22.51■■□□□ 1.19
YCF1P39109 YAL037C-BYAL037C-B 975 nt22.5■■□□□ 1.19
YCF1P39109 NPL3YDR432W 1245 nt22.36■■□□□ 1.17
YCF1P39109 URN1YPR152C 1398 nt22.12■■□□□ 1.13
YCF1P39109 TIR1YER011W 765 nt22.03■■□□□ 1.12
YCF1P39109 MNP1YGL068W 585 nt21.87■■□□□ 1.09
YCF1P39109 YNL208WYNL208W 600 nt21.85■■□□□ 1.09
YCF1P39109 RPN10YHR200W 807 nt21.75■■□□□ 1.07
YCF1P39109 SRB2YHR041C 633 nt21.74■■□□□ 1.07
YCF1P39109 YOL037CYOL037C 354 nt21.68■■□□□ 1.06
YCF1P39109 SSA1YAL005C 1929 nt21.66■■□□□ 1.06
YCF1P39109 tM(CAU)CtM(CAU)C 72 nt21.66■■□□□ 1.06
YCF1P39109 IMT4tM(CAU)E 72 nt21.66■■□□□ 1.06
YCF1P39109 IMT3tM(CAU)J3 72 nt21.66■■□□□ 1.06
YCF1P39109 IMT1tM(CAU)O1 72 nt21.66■■□□□ 1.06
YCF1P39109 IMT2tM(CAU)P 72 nt21.66■■□□□ 1.06
YCF1P39109 HOM6YJR139C 1080 nt21.51■■□□□ 1.03
YCF1P39109 BSC6YOL137W 1494 nt21.49■■□□□ 1.03
YCF1P39109 MOT3YMR070W 1473 nt21.47■■□□□ 1.03
YCF1P39109 OPI9YLR338W 858 nt21.45■■□□□ 1.02
YCF1P39109 YGR021WYGR021W 873 nt21.45■■□□□ 1.02
YCF1P39109 WWM1YFL010C 636 nt21.38■■□□□ 1.01
YCF1P39109 SAH1YER043C 1350 nt21.31■■□□□ 1
YCF1P39109 PUS2YGL063W 1113 nt21.2■□□□□ 0.98
YCF1P39109 RKM5YLR137W 1104 nt21.19■□□□□ 0.98
YCF1P39109 YJR120WYJR120W 351 nt21.15■□□□□ 0.98
YCF1P39109 YJR018WYJR018W 363 nt21.04■□□□□ 0.96
YCF1P39109 YLR281CYLR281C 468 nt20.96■□□□□ 0.95
YCF1P39109 YFL021C-AYFL021C-A 855 nt20.87■□□□□ 0.93
YCF1P39109 PUT4YOR348C 1884 nt20.86■□□□□ 0.93
YCF1P39109 ARE1YCR048W 1833 nt20.83■□□□□ 0.92
YCF1P39109 FMP45YDL222C 930 nt20.82■□□□□ 0.92
YCF1P39109 PUN1YLR414C 792 nt20.8■□□□□ 0.92
YCF1P39109 WHI5YOR083W 888 nt20.78■□□□□ 0.92
YCF1P39109 MRPL8YJL063C 717 nt20.78■□□□□ 0.92
YCF1P39109 YHR049C-AYHR049C-A 297 nt20.76■□□□□ 0.91
YCF1P39109 UBX6YJL048C 1191 nt20.76■□□□□ 0.91
YCF1P39109 RPP2BYDR382W 333 nt20.74■□□□□ 0.91
YCF1P39109 SSA3YBL075C 1950 nt20.69■□□□□ 0.9
YCF1P39109 YLR236CYLR236C 324 nt20.68■□□□□ 0.9
YCF1P39109 YPR011CYPR011C 981 nt20.58■□□□□ 0.89
YCF1P39109 BDH2YAL061W 1254 nt20.53■□□□□ 0.88
YCF1P39109 DSK2YMR276W 1122 nt20.52■□□□□ 0.87
YCF1P39109 PTC2YER089C 1395 nt20.51■□□□□ 0.87
YCF1P39109 YCH1YGR203W 447 nt20.49■□□□□ 0.87
YCF1P39109 ADO1YJR105W 1023 nt20.44■□□□□ 0.86
YCF1P39109 YEL076C-AYEL076C-A 651 nt20.4■□□□□ 0.86
YCF1P39109 YEL076CYEL076C 651 nt20.4■□□□□ 0.86
YCF1P39109 YLR464WYLR464W 651 nt20.4■□□□□ 0.86
YCF1P39109 POA1YBR022W 534 nt20.36■□□□□ 0.85
YCF1P39109 BUD23YCR047C 828 nt20.29■□□□□ 0.84
YCF1P39109 RTG1YOL067C 534 nt20.24■□□□□ 0.83
YCF1P39109 SPP1YPL138C 1062 nt20.24■□□□□ 0.83
YCF1P39109 YBL100CYBL100C 315 nt20.22■□□□□ 0.83
YCF1P39109 LPX1YOR084W 1164 nt20.2■□□□□ 0.82
YCF1P39109 IMP2'YIL154C 1041 nt20.18■□□□□ 0.82
YCF1P39109 FIS1YIL065C 468 nt20.17■□□□□ 0.82
YCF1P39109 LSM3YLR438C-A 270 nt20.14■□□□□ 0.81
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms