Protein–RNA interactions for Protein: P39109
YCF1, Metal resistance protein YCF1, yeast
Protein |
RNA |
Prediction (catRAPID) |
Interaction (RIP-Chip) |
Gene |
UniProt Accession |
Gene |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
Detected Interaction |
YCF1 | P39109 | YML009W-B | YML009W-B | 477 nt | | 33,62 | ■■■□□ 2,97 | |
YCF1 | P39109 | NOP1 | YDL014W | 984 nt | | 32,67 | ■■■□□ 2,82 | |
YCF1 | P39109 | NSR1 | YGR159C | 1245 nt | | 32,09 | ■■■□□ 2,73 | |
YCF1 | P39109 | YKL036C | YKL036C | 393 nt | | 31,42 | ■■■□□ 2,62 | |
YCF1 | P39109 | YJL027C | YJL027C | 417 nt | | 29,55 | ■■■□□ 2,32 | |
YCF1 | P39109 | SCS3 | YGL126W | 1143 nt | | 29,35 | ■■■□□ 2,29 | |
YCF1 | P39109 | Q0297 | Q0297 | 156 nt | | 29,07 | ■■■□□ 2,24 | |
YCF1 | P39109 | SRX1 | YKL086W | 384 nt | | 28,75 | ■■■□□ 2,19 | |
YCF1 | P39109 | MDJ1 | YFL016C | 1536 nt | | 28,34 | ■■■□□ 2,13 | |
YCF1 | P39109 | YCR051W | YCR051W | 669 nt | | 27,47 | ■■□□□ 1,99 | |
YCF1 | P39109 | YOL085C | YOL085C | 342 nt | | 27,09 | ■■□□□ 1,93 | |
YCF1 | P39109 | SCJ1 | YMR214W | 1134 nt | | 27,01 | ■■□□□ 1,91 | |
YCF1 | P39109 | PKP1 | YIL042C | 1185 nt | | 26,83 | ■■□□□ 1,89 | |
YCF1 | P39109 | ATS1 | YAL020C | 1002 nt | | 26,33 | ■■□□□ 1,81 | |
YCF1 | P39109 | RPP1B | YDL130W | 321 nt | | 26,11 | ■■□□□ 1,77 | |
YCF1 | P39109 | TRN1 | tP(UGG)A | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | SUF9 | tP(UGG)F | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | SUF8 | tP(UGG)H | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | tP(UGG)L | tP(UGG)L | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | SUF7 | tP(UGG)M | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | tP(UGG)N1 | tP(UGG)N1 | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | tP(UGG)N2 | tP(UGG)N2 | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | tP(UGG)O1 | tP(UGG)O1 | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | SUF11 | tP(UGG)O2 | 72 nt | | 25,46 | ■■□□□ 1,67 | |
YCF1 | P39109 | CCC1 | YLR220W | 969 nt | | 25,26 | ■■□□□ 1,63 | |
YCF1 | P39109 | DBP2 | YNL112W | 1641 nt | | 25,22 | ■■□□□ 1,63 | |
YCF1 | P39109 | PET122 | YER153C | 765 nt | | 25,04 | ■■□□□ 1,6 | |
YCF1 | P39109 | SCR1 | SCR1 | 522 nt | | 24,87 | ■■□□□ 1,57 | |
YCF1 | P39109 | RTC3 | YHR087W | 336 nt | | 24,84 | ■■□□□ 1,57 | |
YCF1 | P39109 | tP(UGG)O3 | tP(UGG)O3 | 72 nt | | 24,35 | ■■□□□ 1,49 | |
YCF1 | P39109 | RSB1 | YOR049C | 1065 nt | | 24,25 | ■■□□□ 1,47 | |
YCF1 | P39109 | RRN5 | YLR141W | 1092 nt | | 24,23 | ■■□□□ 1,47 | |
YCF1 | P39109 | PST2 | YDR032C | 597 nt | | 24,14 | ■■□□□ 1,45 | |
YCF1 | P39109 | YKL097C | YKL097C | 411 nt | | 23,96 | ■■□□□ 1,43 | |
YCF1 | P39109 | YER088W-B | YER088W-B | 147 nt | | 23,79 | ■■□□□ 1,4 | |
YCF1 | P39109 | RVS167 | YDR388W | 1449 nt | | 23,7 | ■■□□□ 1,38 | |
YCF1 | P39109 | YBR190W | YBR190W | 312 nt | | 23,5 | ■■□□□ 1,35 | |
YCF1 | P39109 | YDJ1 | YNL064C | 1230 nt | | 23,41 | ■■□□□ 1,34 | |
YCF1 | P39109 | SHR5 | YOL110W | 714 nt | | 23,13 | ■■□□□ 1,29 | |
YCF1 | P39109 | SHU1 | YHL006C | 453 nt | | 23,11 | ■■□□□ 1,29 | |
YCF1 | P39109 | GAR1 | YHR089C | 618 nt | | 22,9 | ■■□□□ 1,26 | |
YCF1 | P39109 | YOR139C | YOR139C | 393 nt | | 22,86 | ■■□□□ 1,25 | |
YCF1 | P39109 | DEP1 | YAL013W | 1218 nt | | 22,51 | ■■□□□ 1,19 | |
YCF1 | P39109 | YAL037C-B | YAL037C-B | 975 nt | | 22,5 | ■■□□□ 1,19 | |
YCF1 | P39109 | NPL3 | YDR432W | 1245 nt | | 22,36 | ■■□□□ 1,17 | |
YCF1 | P39109 | URN1 | YPR152C | 1398 nt | | 22,12 | ■■□□□ 1,13 | |
YCF1 | P39109 | TIR1 | YER011W | 765 nt | | 22,03 | ■■□□□ 1,12 | |
YCF1 | P39109 | MNP1 | YGL068W | 585 nt | | 21,87 | ■■□□□ 1,09 | |
YCF1 | P39109 | YNL208W | YNL208W | 600 nt | | 21,85 | ■■□□□ 1,09 | |
YCF1 | P39109 | RPN10 | YHR200W | 807 nt | | 21,75 | ■■□□□ 1,07 | |
YCF1 | P39109 | SRB2 | YHR041C | 633 nt | | 21,74 | ■■□□□ 1,07 | |
YCF1 | P39109 | YOL037C | YOL037C | 354 nt | | 21,68 | ■■□□□ 1,06 | |
YCF1 | P39109 | SSA1 | YAL005C | 1929 nt | | 21,66 | ■■□□□ 1,06 | |
YCF1 | P39109 | tM(CAU)C | tM(CAU)C | 72 nt | | 21,66 | ■■□□□ 1,06 | |
YCF1 | P39109 | IMT4 | tM(CAU)E | 72 nt | | 21,66 | ■■□□□ 1,06 | |
YCF1 | P39109 | IMT3 | tM(CAU)J3 | 72 nt | | 21,66 | ■■□□□ 1,06 | |
YCF1 | P39109 | IMT1 | tM(CAU)O1 | 72 nt | | 21,66 | ■■□□□ 1,06 | |
YCF1 | P39109 | IMT2 | tM(CAU)P | 72 nt | | 21,66 | ■■□□□ 1,06 | |
YCF1 | P39109 | HOM6 | YJR139C | 1080 nt | | 21,51 | ■■□□□ 1,03 | |
YCF1 | P39109 | BSC6 | YOL137W | 1494 nt | | 21,49 | ■■□□□ 1,03 | |
YCF1 | P39109 | MOT3 | YMR070W | 1473 nt | | 21,47 | ■■□□□ 1,03 | |
YCF1 | P39109 | OPI9 | YLR338W | 858 nt | | 21,45 | ■■□□□ 1,02 | |
YCF1 | P39109 | YGR021W | YGR021W | 873 nt | | 21,45 | ■■□□□ 1,02 | |
YCF1 | P39109 | WWM1 | YFL010C | 636 nt | | 21,38 | ■■□□□ 1,01 | |
YCF1 | P39109 | SAH1 | YER043C | 1350 nt | | 21,31 | ■■□□□ 1 | |
YCF1 | P39109 | PUS2 | YGL063W | 1113 nt | | 21,2 | ■□□□□ 0,98 | |
YCF1 | P39109 | RKM5 | YLR137W | 1104 nt | | 21,19 | ■□□□□ 0,98 | |
YCF1 | P39109 | YJR120W | YJR120W | 351 nt | | 21,15 | ■□□□□ 0,98 | |
YCF1 | P39109 | YJR018W | YJR018W | 363 nt | | 21,04 | ■□□□□ 0,96 | |
YCF1 | P39109 | YLR281C | YLR281C | 468 nt | | 20,96 | ■□□□□ 0,95 | |
YCF1 | P39109 | YFL021C-A | YFL021C-A | 855 nt | | 20,87 | ■□□□□ 0,93 | |
YCF1 | P39109 | PUT4 | YOR348C | 1884 nt | | 20,86 | ■□□□□ 0,93 | |
YCF1 | P39109 | ARE1 | YCR048W | 1833 nt | | 20,83 | ■□□□□ 0,92 | |
YCF1 | P39109 | FMP45 | YDL222C | 930 nt | | 20,82 | ■□□□□ 0,92 | |
YCF1 | P39109 | PUN1 | YLR414C | 792 nt | | 20,8 | ■□□□□ 0,92 | |
YCF1 | P39109 | WHI5 | YOR083W | 888 nt | | 20,78 | ■□□□□ 0,92 | |
YCF1 | P39109 | MRPL8 | YJL063C | 717 nt | | 20,78 | ■□□□□ 0,92 | |
YCF1 | P39109 | YHR049C-A | YHR049C-A | 297 nt | | 20,76 | ■□□□□ 0,91 | |
YCF1 | P39109 | UBX6 | YJL048C | 1191 nt | | 20,76 | ■□□□□ 0,91 | |
YCF1 | P39109 | RPP2B | YDR382W | 333 nt | | 20,74 | ■□□□□ 0,91 | |
YCF1 | P39109 | SSA3 | YBL075C | 1950 nt | | 20,69 | ■□□□□ 0,9 | |
YCF1 | P39109 | YLR236C | YLR236C | 324 nt | | 20,68 | ■□□□□ 0,9 | |
YCF1 | P39109 | YPR011C | YPR011C | 981 nt | | 20,58 | ■□□□□ 0,89 | |
YCF1 | P39109 | BDH2 | YAL061W | 1254 nt | | 20,53 | ■□□□□ 0,88 | |
YCF1 | P39109 | DSK2 | YMR276W | 1122 nt | | 20,52 | ■□□□□ 0,87 | |
YCF1 | P39109 | PTC2 | YER089C | 1395 nt | | 20,51 | ■□□□□ 0,87 | |
YCF1 | P39109 | YCH1 | YGR203W | 447 nt | | 20,49 | ■□□□□ 0,87 | |
YCF1 | P39109 | ADO1 | YJR105W | 1023 nt | | 20,44 | ■□□□□ 0,86 | |
YCF1 | P39109 | YEL076C-A | YEL076C-A | 651 nt | | 20,4 | ■□□□□ 0,86 | |
YCF1 | P39109 | YEL076C | YEL076C | 651 nt | | 20,4 | ■□□□□ 0,86 | |
YCF1 | P39109 | YLR464W | YLR464W | 651 nt | | 20,4 | ■□□□□ 0,86 | |
YCF1 | P39109 | POA1 | YBR022W | 534 nt | | 20,36 | ■□□□□ 0,85 | |
YCF1 | P39109 | BUD23 | YCR047C | 828 nt | | 20,29 | ■□□□□ 0,84 | |
YCF1 | P39109 | RTG1 | YOL067C | 534 nt | | 20,24 | ■□□□□ 0,83 | |
YCF1 | P39109 | SPP1 | YPL138C | 1062 nt | | 20,24 | ■□□□□ 0,83 | |
YCF1 | P39109 | YBL100C | YBL100C | 315 nt | | 20,22 | ■□□□□ 0,83 | |
YCF1 | P39109 | LPX1 | YOR084W | 1164 nt | | 20,2 | ■□□□□ 0,82 | |
YCF1 | P39109 | IMP2' | YIL154C | 1041 nt | | 20,18 | ■□□□□ 0,82 | |
YCF1 | P39109 | FIS1 | YIL065C | 468 nt | | 20,17 | ■□□□□ 0,82 | |
YCF1 | P39109 | LSM3 | YLR438C-A | 270 nt | | 20,14 | ■□□□□ 0,81 | |
Retrieved 100 of 7,029 protein–RNA pairs in 10,9 ms