Protein–RNA interactions for Protein: P53115

INO80, Chromatin-remodeling ATPase INO80, yeastyeast

Predictions only

Length 1,489 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
INO80P53115 YML009W-BYML009W-B 477 nt39.06■■■■□ 3.84
INO80P53115 NOP1YDL014W 984 nt38.34■■■■□ 3.73
INO80P53115 NSR1YGR159C 1245 nt37.08■■■■□ 3.53
INO80P53115 YKL036CYKL036C 393 nt37.04■■■■□ 3.52
INO80P53115 YJL027CYJL027C 417 nt34.94■■■■□ 3.18
INO80P53115 SCS3YGL126W 1143 nt34.68■■■■□ 3.14
INO80P53115 Q0297Q0297 156 nt34.16■■■■□ 3.06
INO80P53115 SRX1YKL086W 384 nt33.62■■■□□ 2.97
INO80P53115 MDJ1YFL016C 1536 nt32.58■■■□□ 2.81
INO80P53115 SCJ1YMR214W 1134 nt32.49■■■□□ 2.79
INO80P53115 YCR051WYCR051W 669 nt32.13■■■□□ 2.73
INO80P53115 YOL085CYOL085C 342 nt32.03■■■□□ 2.72
INO80P53115 PKP1YIL042C 1185 nt31.54■■■□□ 2.64
INO80P53115 ATS1YAL020C 1002 nt31.36■■■□□ 2.61
INO80P53115 RPP1BYDL130W 321 nt30.69■■■□□ 2.5
INO80P53115 RTC3YHR087W 336 nt29.73■■■□□ 2.35
INO80P53115 TRN1tP(UGG)A 72 nt29.5■■■□□ 2.31
INO80P53115 SUF9tP(UGG)F 72 nt29.5■■■□□ 2.31
INO80P53115 SUF8tP(UGG)H 72 nt29.5■■■□□ 2.31
INO80P53115 tP(UGG)LtP(UGG)L 72 nt29.5■■■□□ 2.31
INO80P53115 SUF7tP(UGG)M 72 nt29.5■■■□□ 2.31
INO80P53115 tP(UGG)N1tP(UGG)N1 72 nt29.5■■■□□ 2.31
INO80P53115 tP(UGG)N2tP(UGG)N2 72 nt29.5■■■□□ 2.31
INO80P53115 tP(UGG)O1tP(UGG)O1 72 nt29.5■■■□□ 2.31
INO80P53115 SUF11tP(UGG)O2 72 nt29.5■■■□□ 2.31
INO80P53115 CCC1YLR220W 969 nt29.29■■■□□ 2.28
INO80P53115 PET122YER153C 765 nt29.27■■■□□ 2.28
INO80P53115 SCR1SCR1 522 nt29.24■■■□□ 2.27
INO80P53115 DBP2YNL112W 1641 nt28.87■■■□□ 2.21
INO80P53115 PST2YDR032C 597 nt28.73■■■□□ 2.19
INO80P53115 YKL097CYKL097C 411 nt28.54■■■□□ 2.16
INO80P53115 RRN5YLR141W 1092 nt28.5■■■□□ 2.15
INO80P53115 RSB1YOR049C 1065 nt28.48■■■□□ 2.15
INO80P53115 tP(UGG)O3tP(UGG)O3 72 nt28.42■■■□□ 2.14
INO80P53115 YER088W-BYER088W-B 147 nt27.97■■■□□ 2.07
INO80P53115 RVS167YDR388W 1449 nt27.38■■□□□ 1.97
INO80P53115 YDJ1YNL064C 1230 nt27.36■■□□□ 1.97
INO80P53115 SHU1YHL006C 453 nt27.32■■□□□ 1.96
INO80P53115 YOR139CYOR139C 393 nt27.17■■□□□ 1.94
INO80P53115 YBR190WYBR190W 312 nt27.1■■□□□ 1.93
INO80P53115 GAR1YHR089C 618 nt26.66■■□□□ 1.86
INO80P53115 SHR5YOL110W 714 nt26.65■■□□□ 1.86
INO80P53115 NPL3YDR432W 1245 nt26.51■■□□□ 1.83
INO80P53115 YAL037C-BYAL037C-B 975 nt26.48■■□□□ 1.83
INO80P53115 BSC6YOL137W 1494 nt25.96■■□□□ 1.75
INO80P53115 DEP1YAL013W 1218 nt25.88■■□□□ 1.73
INO80P53115 tM(CAU)CtM(CAU)C 72 nt25.87■■□□□ 1.73
INO80P53115 IMT4tM(CAU)E 72 nt25.87■■□□□ 1.73
INO80P53115 IMT3tM(CAU)J3 72 nt25.87■■□□□ 1.73
INO80P53115 IMT1tM(CAU)O1 72 nt25.87■■□□□ 1.73
INO80P53115 IMT2tM(CAU)P 72 nt25.87■■□□□ 1.73
INO80P53115 TIR1YER011W 765 nt25.65■■□□□ 1.7
INO80P53115 MOT3YMR070W 1473 nt25.63■■□□□ 1.69
INO80P53115 RPN10YHR200W 807 nt25.57■■□□□ 1.68
INO80P53115 MNP1YGL068W 585 nt25.49■■□□□ 1.67
INO80P53115 YOL037CYOL037C 354 nt25.48■■□□□ 1.67
INO80P53115 URN1YPR152C 1398 nt25.47■■□□□ 1.67
INO80P53115 YNL208WYNL208W 600 nt25.2■■□□□ 1.62
INO80P53115 HOM6YJR139C 1080 nt25.18■■□□□ 1.62
INO80P53115 PUS2YGL063W 1113 nt25.12■■□□□ 1.61
INO80P53115 SRB2YHR041C 633 nt25.12■■□□□ 1.61
INO80P53115 YGR021WYGR021W 873 nt25.09■■□□□ 1.61
INO80P53115 UBX6YJL048C 1191 nt25.09■■□□□ 1.61
INO80P53115 SSA1YAL005C 1929 nt25.05■■□□□ 1.6
INO80P53115 MRPL8YJL063C 717 nt25.02■■□□□ 1.6
INO80P53115 WWM1YFL010C 636 nt24.89■■□□□ 1.58
INO80P53115 RKM5YLR137W 1104 nt24.81■■□□□ 1.56
INO80P53115 YLR281CYLR281C 468 nt24.76■■□□□ 1.55
INO80P53115 OPI9YLR338W 858 nt24.69■■□□□ 1.54
INO80P53115 FMP45YDL222C 930 nt24.58■■□□□ 1.52
INO80P53115 ADO1YJR105W 1023 nt24.52■■□□□ 1.52
INO80P53115 SAH1YER043C 1350 nt24.52■■□□□ 1.52
INO80P53115 WHI5YOR083W 888 nt24.47■■□□□ 1.51
INO80P53115 YEL076C-AYEL076C-A 651 nt24.34■■□□□ 1.49
INO80P53115 YEL076CYEL076C 651 nt24.34■■□□□ 1.49
INO80P53115 YLR464WYLR464W 651 nt24.34■■□□□ 1.49
INO80P53115 YPR011CYPR011C 981 nt24.33■■□□□ 1.49
INO80P53115 YFL021C-AYFL021C-A 855 nt24.32■■□□□ 1.48
INO80P53115 YCH1YGR203W 447 nt24.32■■□□□ 1.48
INO80P53115 YJR018WYJR018W 363 nt24.22■■□□□ 1.47
INO80P53115 YLR236CYLR236C 324 nt24.21■■□□□ 1.47
INO80P53115 YFL015W-AYFL015W-A 318 nt24.19■■□□□ 1.46
INO80P53115 YJR120WYJR120W 351 nt24.16■■□□□ 1.46
INO80P53115 DSK2YMR276W 1122 nt24.14■■□□□ 1.46
INO80P53115 RTG1YOL067C 534 nt24.02■■□□□ 1.44
INO80P53115 PUT4YOR348C 1884 nt24.01■■□□□ 1.43
INO80P53115 PUN1YLR414C 792 nt24■■□□□ 1.43
INO80P53115 RPP2BYDR382W 333 nt23.99■■□□□ 1.43
INO80P53115 SSA3YBL075C 1950 nt23.95■■□□□ 1.42
INO80P53115 ARE1YCR048W 1833 nt23.93■■□□□ 1.42
INO80P53115 SPP1YPL138C 1062 nt23.92■■□□□ 1.42
INO80P53115 YHR049C-AYHR049C-A 297 nt23.91■■□□□ 1.42
INO80P53115 YDR094WYDR094W 336 nt23.88■■□□□ 1.41
INO80P53115 SIS1YNL007C 1059 nt23.83■■□□□ 1.41
INO80P53115 SBA1YKL117W 651 nt23.82■■□□□ 1.4
INO80P53115 IMP2'YIL154C 1041 nt23.76■■□□□ 1.39
INO80P53115 LPX1YOR084W 1164 nt23.66■■□□□ 1.38
INO80P53115 PTC2YER089C 1395 nt23.65■■□□□ 1.38
INO80P53115 BDH2YAL061W 1254 nt23.62■■□□□ 1.37
INO80P53115 LSM3YLR438C-A 270 nt23.48■■□□□ 1.35
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms