Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 YML009W-BYML009W-B 477 nt27.88■■■□□ 2.05
PTP3P40048 NOP1YDL014W 984 nt27.32■■□□□ 1.96
PTP3P40048 NSR1YGR159C 1245 nt26.82■■□□□ 1.88
PTP3P40048 YKL036CYKL036C 393 nt26.03■■□□□ 1.76
PTP3P40048 YJL027CYJL027C 417 nt24.51■■□□□ 1.51
PTP3P40048 Q0297Q0297 156 nt24.17■■□□□ 1.46
PTP3P40048 SCS3YGL126W 1143 nt24.16■■□□□ 1.46
PTP3P40048 SRX1YKL086W 384 nt23.88■■□□□ 1.41
PTP3P40048 MDJ1YFL016C 1536 nt23.18■■□□□ 1.3
PTP3P40048 YCR051WYCR051W 669 nt22.84■■□□□ 1.25
PTP3P40048 YOL085CYOL085C 342 nt22.55■■□□□ 1.2
PTP3P40048 SCJ1YMR214W 1134 nt22.31■■□□□ 1.16
PTP3P40048 PKP1YIL042C 1185 nt22.23■■□□□ 1.15
PTP3P40048 ATS1YAL020C 1002 nt21.83■■□□□ 1.09
PTP3P40048 RPP1BYDL130W 321 nt21.73■■□□□ 1.07
PTP3P40048 TRN1tP(UGG)A 72 nt21.1■□□□□ 0.97
PTP3P40048 SUF9tP(UGG)F 72 nt21.1■□□□□ 0.97
PTP3P40048 SUF8tP(UGG)H 72 nt21.1■□□□□ 0.97
PTP3P40048 tP(UGG)LtP(UGG)L 72 nt21.1■□□□□ 0.97
PTP3P40048 SUF7tP(UGG)M 72 nt21.1■□□□□ 0.97
PTP3P40048 tP(UGG)N1tP(UGG)N1 72 nt21.1■□□□□ 0.97
PTP3P40048 tP(UGG)N2tP(UGG)N2 72 nt21.1■□□□□ 0.97
PTP3P40048 tP(UGG)O1tP(UGG)O1 72 nt21.1■□□□□ 0.97
PTP3P40048 SUF11tP(UGG)O2 72 nt21.1■□□□□ 0.97
PTP3P40048 CCC1YLR220W 969 nt21.05■□□□□ 0.96
PTP3P40048 DBP2YNL112W 1641 nt20.78■□□□□ 0.92
PTP3P40048 PET122YER153C 765 nt20.73■□□□□ 0.91
PTP3P40048 SCR1SCR1 522 nt20.68■□□□□ 0.9
PTP3P40048 RTC3YHR087W 336 nt20.46■□□□□ 0.87
PTP3P40048 tP(UGG)O3tP(UGG)O3 72 nt20.29■□□□□ 0.84
PTP3P40048 RRN5YLR141W 1092 nt20.22■□□□□ 0.83
PTP3P40048 RSB1YOR049C 1065 nt20.08■□□□□ 0.81
PTP3P40048 PST2YDR032C 597 nt20.05■□□□□ 0.8
PTP3P40048 Q0182Q0182 405 nt19.86■□□□□ 0.77
PTP3P40048 YER088W-BYER088W-B 147 nt19.82■□□□□ 0.76
PTP3P40048 MOT3YMR070W 1473 nt19.79■□□□□ 0.76
PTP3P40048 YKL097CYKL097C 411 nt19.74■□□□□ 0.75
PTP3P40048 RVS167YDR388W 1449 nt19.69■□□□□ 0.74
PTP3P40048 YDJ1YNL064C 1230 nt19.54■□□□□ 0.72
PTP3P40048 YBR190WYBR190W 312 nt19.4■□□□□ 0.7
PTP3P40048 SHR5YOL110W 714 nt19.21■□□□□ 0.67
PTP3P40048 GAR1YHR089C 618 nt19.11■□□□□ 0.65
PTP3P40048 SHU1YHL006C 453 nt19.1■□□□□ 0.65
PTP3P40048 YOR139CYOR139C 393 nt18.81■□□□□ 0.6
PTP3P40048 YGR139WYGR139W 339 nt18.74■□□□□ 0.59
PTP3P40048 YAL037C-BYAL037C-B 975 nt18.64■□□□□ 0.57
PTP3P40048 DEP1YAL013W 1218 nt18.54■□□□□ 0.56
PTP3P40048 NPL3YDR432W 1245 nt18.46■□□□□ 0.55
PTP3P40048 TIR1YER011W 765 nt18.37■□□□□ 0.53
PTP3P40048 URN1YPR152C 1398 nt18.21■□□□□ 0.51
PTP3P40048 YNL208WYNL208W 600 nt18.2■□□□□ 0.5
PTP3P40048 NME1NME1 340 nt18.07■□□□□ 0.48
PTP3P40048 RPN10YHR200W 807 nt18.06■□□□□ 0.48
PTP3P40048 tM(CAU)CtM(CAU)C 72 nt18■□□□□ 0.47
PTP3P40048 IMT4tM(CAU)E 72 nt18■□□□□ 0.47
PTP3P40048 IMT3tM(CAU)J3 72 nt18■□□□□ 0.47
PTP3P40048 IMT1tM(CAU)O1 72 nt18■□□□□ 0.47
PTP3P40048 IMT2tM(CAU)P 72 nt18■□□□□ 0.47
PTP3P40048 SSA1YAL005C 1929 nt18■□□□□ 0.47
PTP3P40048 MNP1YGL068W 585 nt17.97■□□□□ 0.47
PTP3P40048 SRB2YHR041C 633 nt17.93■□□□□ 0.46
PTP3P40048 YOL037CYOL037C 354 nt17.86■□□□□ 0.45
PTP3P40048 HOM6YJR139C 1080 nt17.83■□□□□ 0.44
PTP3P40048 YGR021WYGR021W 873 nt17.8■□□□□ 0.44
PTP3P40048 WWM1YFL010C 636 nt17.76■□□□□ 0.43
PTP3P40048 OPI9YLR338W 858 nt17.7■□□□□ 0.42
PTP3P40048 BSC6YOL137W 1494 nt17.64■□□□□ 0.41
PTP3P40048 PUS2YGL063W 1113 nt17.6■□□□□ 0.41
PTP3P40048 RKM5YLR137W 1104 nt17.57■□□□□ 0.4
PTP3P40048 SAH1YER043C 1350 nt17.46■□□□□ 0.39
PTP3P40048 YLR281CYLR281C 468 nt17.42■□□□□ 0.38
PTP3P40048 YJR018WYJR018W 363 nt17.4■□□□□ 0.38
PTP3P40048 YFL021C-AYFL021C-A 855 nt17.35■□□□□ 0.37
PTP3P40048 YJR120WYJR120W 351 nt17.33■□□□□ 0.36
PTP3P40048 WHI5YOR083W 888 nt17.27■□□□□ 0.36
PTP3P40048 RPP2BYDR382W 333 nt17.26■□□□□ 0.35
PTP3P40048 FMP45YDL222C 930 nt17.18■□□□□ 0.34
PTP3P40048 PUN1YLR414C 792 nt17.18■□□□□ 0.34
PTP3P40048 MRPL8YJL063C 717 nt17.13■□□□□ 0.33
PTP3P40048 SSA3YBL075C 1950 nt17.11■□□□□ 0.33
PTP3P40048 YPR011CYPR011C 981 nt17.1■□□□□ 0.33
PTP3P40048 UBX6YJL048C 1191 nt17.05■□□□□ 0.32
PTP3P40048 BDH2YAL061W 1254 nt17.04■□□□□ 0.32
PTP3P40048 YCH1YGR203W 447 nt16.99■□□□□ 0.31
PTP3P40048 CSM2YIL132C 642 nt16.99■□□□□ 0.31
PTP3P40048 PUT4YOR348C 1884 nt16.99■□□□□ 0.31
PTP3P40048 DSK2YMR276W 1122 nt16.98■□□□□ 0.31
PTP3P40048 YLR236CYLR236C 324 nt16.97■□□□□ 0.31
PTP3P40048 ARE1YCR048W 1833 nt16.97■□□□□ 0.31
PTP3P40048 LSM3YLR438C-A 270 nt16.93■□□□□ 0.3
PTP3P40048 PTC2YER089C 1395 nt16.91■□□□□ 0.3
PTP3P40048 ADO1YJR105W 1023 nt16.87■□□□□ 0.29
PTP3P40048 YHR049C-AYHR049C-A 297 nt16.8■□□□□ 0.28
PTP3P40048 YEL076C-AYEL076C-A 651 nt16.79■□□□□ 0.28
PTP3P40048 YEL076CYEL076C 651 nt16.79■□□□□ 0.28
PTP3P40048 YLR464WYLR464W 651 nt16.79■□□□□ 0.28
PTP3P40048 IMP2'YIL154C 1041 nt16.76■□□□□ 0.27
PTP3P40048 SPP1YPL138C 1062 nt16.73■□□□□ 0.27
PTP3P40048 PAU21YOR394W 495 nt16.67■□□□□ 0.26
PTP3P40048 PAU22YPL282C 495 nt16.67■□□□□ 0.26
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms