Protein–RNA interactions for Protein: P38249

RPG1, Eukaryotic translation initiation factor 3 subunit A, yeastyeast

Known RBP Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPG1P38249 YML009W-BYML009W-B 477 nt25.82■■□□□ 1.72
RPG1P38249 NOP1YDL014W 984 nt25.36■■□□□ 1.65
RPG1P38249 NSR1YGR159C 1245 nt25.01■■□□□ 1.59
RPG1P38249 YKL036CYKL036C 393 nt24.1■■□□□ 1.45
RPG1P38249 YJL027CYJL027C 417 nt22.64■■□□□ 1.21
RPG1P38249 Q0297Q0297 156 nt22.45■■□□□ 1.18
RPG1P38249 SCS3YGL126W 1143 nt22.31■■□□□ 1.16
RPG1P38249 SRX1YKL086W 384 nt22.18■■□□□ 1.14
RPG1P38249 YGR139WYGR139W 339 nt21.95■■□□□ 1.1
RPG1P38249 MDJ1YFL016C 1536 nt21.55■■□□□ 1.04
RPG1P38249 VAR1Q0140 1197 nt21.27■■□□□ 1
RPG1P38249 YCR051WYCR051W 669 nt21.12■□□□□ 0.97
RPG1P38249 YOL085CYOL085C 342 nt20.87■□□□□ 0.93
RPG1P38249 SCJ1YMR214W 1134 nt20.65■□□□□ 0.9
RPG1P38249 PKP1YIL042C 1185 nt20.49■□□□□ 0.87
RPG1P38249 ATS1YAL020C 1002 nt20.16■□□□□ 0.82
RPG1P38249 RPP1BYDL130W 321 nt20.15■□□□□ 0.82
RPG1P38249 YDR509WYDR509W 348 nt20■□□□□ 0.79
RPG1P38249 TRN1tP(UGG)A 72 nt19.62■□□□□ 0.73
RPG1P38249 SUF9tP(UGG)F 72 nt19.62■□□□□ 0.73
RPG1P38249 SUF8tP(UGG)H 72 nt19.62■□□□□ 0.73
RPG1P38249 tP(UGG)LtP(UGG)L 72 nt19.62■□□□□ 0.73
RPG1P38249 SUF7tP(UGG)M 72 nt19.62■□□□□ 0.73
RPG1P38249 tP(UGG)N1tP(UGG)N1 72 nt19.62■□□□□ 0.73
RPG1P38249 tP(UGG)N2tP(UGG)N2 72 nt19.62■□□□□ 0.73
RPG1P38249 tP(UGG)O1tP(UGG)O1 72 nt19.62■□□□□ 0.73
RPG1P38249 SUF11tP(UGG)O2 72 nt19.62■□□□□ 0.73
RPG1P38249 NME1NME1 340 nt19.52■□□□□ 0.72
RPG1P38249 Q0017Q0017 162 nt19.48■□□□□ 0.71
RPG1P38249 CSM2YIL132C 642 nt19.47■□□□□ 0.71
RPG1P38249 CCC1YLR220W 969 nt19.47■□□□□ 0.71
RPG1P38249 PAU21YOR394W 495 nt19.36■□□□□ 0.69
RPG1P38249 PAU22YPL282C 495 nt19.36■□□□□ 0.69
RPG1P38249 DBP2YNL112W 1641 nt19.36■□□□□ 0.69
RPG1P38249 Q0142Q0142 177 nt19.32■□□□□ 0.68
RPG1P38249 PAM17YKR065C 594 nt19.3■□□□□ 0.68
RPG1P38249 PET122YER153C 765 nt19.18■□□□□ 0.66
RPG1P38249 MOT3YMR070W 1473 nt19.16■□□□□ 0.66
RPG1P38249 SCR1SCR1 522 nt19.16■□□□□ 0.66
RPG1P38249 ARO7YPR060C 771 nt19.15■□□□□ 0.66
RPG1P38249 Q0144Q0144 330 nt19.13■□□□□ 0.65
RPG1P38249 BMT5YIL096C 1011 nt18.91■□□□□ 0.62
RPG1P38249 REG2YBR050C 1017 nt18.85■□□□□ 0.61
RPG1P38249 Q0182Q0182 405 nt18.84■□□□□ 0.61
RPG1P38249 tP(UGG)O3tP(UGG)O3 72 nt18.82■□□□□ 0.6
RPG1P38249 RTC3YHR087W 336 nt18.81■□□□□ 0.6
RPG1P38249 SEM1YDR363W-A 270 nt18.79■□□□□ 0.6
RPG1P38249 BUR6YER159C 429 nt18.78■□□□□ 0.6
RPG1P38249 RRN5YLR141W 1092 nt18.72■□□□□ 0.59
RPG1P38249 PST2YDR032C 597 nt18.55■□□□□ 0.56
RPG1P38249 RSB1YOR049C 1065 nt18.54■□□□□ 0.56
RPG1P38249 Q0255Q0255 1419 nt18.49■□□□□ 0.55
RPG1P38249 YOR169CYOR169C 465 nt18.41■□□□□ 0.54
RPG1P38249 Q0010Q0010 387 nt18.41■□□□□ 0.54
RPG1P38249 YER088W-BYER088W-B 147 nt18.34■□□□□ 0.53
RPG1P38249 RVS167YDR388W 1449 nt18.33■□□□□ 0.53
RPG1P38249 YIR018C-AYIR018C-A 138 nt18.33■□□□□ 0.52
RPG1P38249 YGL188CYGL188C 174 nt18.3■□□□□ 0.52
RPG1P38249 AI3Q0060 1248 nt18.27■□□□□ 0.52
RPG1P38249 AI5_BETAQ0075 1065 nt18.24■□□□□ 0.51
RPG1P38249 SRN2YLR119W 642 nt18.21■□□□□ 0.51
RPG1P38249 YKL097CYKL097C 411 nt18.2■□□□□ 0.5
RPG1P38249 YDJ1YNL064C 1230 nt18.18■□□□□ 0.5
RPG1P38249 YBR190WYBR190W 312 nt18.15■□□□□ 0.5
RPG1P38249 YCR099CYCR099C 468 nt18.09■□□□□ 0.49
RPG1P38249 SHR5YOL110W 714 nt17.88■□□□□ 0.45
RPG1P38249 ATP6Q0085 780 nt17.87■□□□□ 0.45
RPG1P38249 ARP10YDR106W 855 nt17.84■□□□□ 0.45
RPG1P38249 GAR1YHR089C 618 nt17.69■□□□□ 0.42
RPG1P38249 AIR1YIL079C 1083 nt17.68■□□□□ 0.42
RPG1P38249 PET20YPL159C 762 nt17.66■□□□□ 0.42
RPG1P38249 ARA2YMR041C 1008 nt17.65■□□□□ 0.42
RPG1P38249 SHU1YHL006C 453 nt17.64■□□□□ 0.41
RPG1P38249 YNR068CYNR068C 819 nt17.41■□□□□ 0.38
RPG1P38249 snR78snR78 87 nt17.39■□□□□ 0.37
RPG1P38249 YOR139CYOR139C 393 nt17.35■□□□□ 0.37
RPG1P38249 YPL168WYPL168W 1293 nt17.35■□□□□ 0.37
RPG1P38249 KTR3YBR205W 1215 nt17.32■□□□□ 0.36
RPG1P38249 YLR122CYLR122C 378 nt17.3■□□□□ 0.36
RPG1P38249 UTP6YDR449C 1323 nt17.26■□□□□ 0.35
RPG1P38249 ABZ2YMR289W 1125 nt17.22■□□□□ 0.35
RPG1P38249 SKG1YKR100C 1068 nt17.21■□□□□ 0.35
RPG1P38249 YEL009C-AYEL009C-A 408 nt17.17■□□□□ 0.34
RPG1P38249 DEP1YAL013W 1218 nt17.17■□□□□ 0.34
RPG1P38249 YAL037C-BYAL037C-B 975 nt17.17■□□□□ 0.34
RPG1P38249 PHO92YDR374C 921 nt17.14■□□□□ 0.33
RPG1P38249 NEM1YHR004C 1341 nt17.14■□□□□ 0.33
RPG1P38249 TIR1YER011W 765 nt17.06■□□□□ 0.32
RPG1P38249 NPL3YDR432W 1245 nt17.02■□□□□ 0.32
RPG1P38249 YHL044WYHL044W 708 nt17■□□□□ 0.31
RPG1P38249 YNL208WYNL208W 600 nt16.95■□□□□ 0.3
RPG1P38249 URN1YPR152C 1398 nt16.94■□□□□ 0.3
RPG1P38249 AST1YBL069W 1290 nt16.89■□□□□ 0.29
RPG1P38249 RPN10YHR200W 807 nt16.84■□□□□ 0.29
RPG1P38249 RPM1RPM1 483 nt16.8■□□□□ 0.28
RPG1P38249 URE2YNL229C 1065 nt16.8■□□□□ 0.28
RPG1P38249 STD1YOR047C 1335 nt16.79■□□□□ 0.28
RPG1P38249 YMR119W-AYMR119W-A 375 nt16.78■□□□□ 0.28
RPG1P38249 TOM20YGR082W 552 nt16.76■□□□□ 0.27
RPG1P38249 YAL016C-BYAL016C-B 186 nt16.74■□□□□ 0.27
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms