Protein–RNA interactions for Protein: P53599

SSK2, MAP kinase kinase kinase SSK2, yeastyeast

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSK2P53599 YML009W-BYML009W-B 477 nt34.9■■■■□ 3.18
SSK2P53599 NOP1YDL014W 984 nt33.57■■■□□ 2.96
SSK2P53599 NSR1YGR159C 1245 nt33.38■■■□□ 2.93
SSK2P53599 YKL036CYKL036C 393 nt31.97■■■□□ 2.71
SSK2P53599 YJL027CYJL027C 417 nt30.01■■■□□ 2.39
SSK2P53599 Q0297Q0297 156 nt29.78■■■□□ 2.36
SSK2P53599 SCS3YGL126W 1143 nt29.72■■■□□ 2.35
SSK2P53599 MDJ1YFL016C 1536 nt29.66■■■□□ 2.34
SSK2P53599 SRX1YKL086W 384 nt29.62■■■□□ 2.33
SSK2P53599 YCR051WYCR051W 669 nt28.3■■■□□ 2.12
SSK2P53599 YOL085CYOL085C 342 nt27.56■■■□□ 2
SSK2P53599 PKP1YIL042C 1185 nt27.45■■□□□ 1.99
SSK2P53599 SCJ1YMR214W 1134 nt26.96■■□□□ 1.91
SSK2P53599 RPP1BYDL130W 321 nt26.75■■□□□ 1.87
SSK2P53599 TRN1tP(UGG)A 72 nt26.52■■□□□ 1.84
SSK2P53599 SUF9tP(UGG)F 72 nt26.52■■□□□ 1.84
SSK2P53599 SUF8tP(UGG)H 72 nt26.52■■□□□ 1.84
SSK2P53599 tP(UGG)LtP(UGG)L 72 nt26.52■■□□□ 1.84
SSK2P53599 SUF7tP(UGG)M 72 nt26.52■■□□□ 1.84
SSK2P53599 tP(UGG)N1tP(UGG)N1 72 nt26.52■■□□□ 1.84
SSK2P53599 tP(UGG)N2tP(UGG)N2 72 nt26.52■■□□□ 1.84
SSK2P53599 tP(UGG)O1tP(UGG)O1 72 nt26.52■■□□□ 1.84
SSK2P53599 SUF11tP(UGG)O2 72 nt26.52■■□□□ 1.84
SSK2P53599 ATS1YAL020C 1002 nt26.47■■□□□ 1.83
SSK2P53599 DBP2YNL112W 1641 nt26.33■■□□□ 1.81
SSK2P53599 CCC1YLR220W 969 nt26.24■■□□□ 1.79
SSK2P53599 PET122YER153C 765 nt25.79■■□□□ 1.72
SSK2P53599 SCR1SCR1 522 nt25.4■■□□□ 1.66
SSK2P53599 tP(UGG)O3tP(UGG)O3 72 nt25.2■■□□□ 1.62
SSK2P53599 RTC3YHR087W 336 nt24.92■■□□□ 1.58
SSK2P53599 RRN5YLR141W 1092 nt24.86■■□□□ 1.57
SSK2P53599 RSB1YOR049C 1065 nt24.79■■□□□ 1.56
SSK2P53599 RVS167YDR388W 1449 nt24.71■■□□□ 1.55
SSK2P53599 YBR190WYBR190W 312 nt24.58■■□□□ 1.52
SSK2P53599 YER088W-BYER088W-B 147 nt24.42■■□□□ 1.5
SSK2P53599 PST2YDR032C 597 nt24.33■■□□□ 1.48
SSK2P53599 YDJ1YNL064C 1230 nt24.16■■□□□ 1.46
SSK2P53599 YKL097CYKL097C 411 nt24.11■■□□□ 1.45
SSK2P53599 SHR5YOL110W 714 nt24.11■■□□□ 1.45
SSK2P53599 GAR1YHR089C 618 nt23.78■■□□□ 1.4
SSK2P53599 DEP1YAL013W 1218 nt23.49■■□□□ 1.35
SSK2P53599 SHU1YHL006C 453 nt23.46■■□□□ 1.35
SSK2P53599 URN1YPR152C 1398 nt23.13■■□□□ 1.29
SSK2P53599 YAL037C-BYAL037C-B 975 nt23.02■■□□□ 1.28
SSK2P53599 YOR139CYOR139C 393 nt23.01■■□□□ 1.27
SSK2P53599 TIR1YER011W 765 nt22.88■■□□□ 1.25
SSK2P53599 YNL208WYNL208W 600 nt22.78■■□□□ 1.24
SSK2P53599 RPN10YHR200W 807 nt22.69■■□□□ 1.22
SSK2P53599 SRB2YHR041C 633 nt22.63■■□□□ 1.21
SSK2P53599 NPL3YDR432W 1245 nt22.6■■□□□ 1.21
SSK2P53599 MNP1YGL068W 585 nt22.54■■□□□ 1.2
SSK2P53599 SSA1YAL005C 1929 nt22.54■■□□□ 1.2
SSK2P53599 OPI9YLR338W 858 nt22.42■■□□□ 1.18
SSK2P53599 SAH1YER043C 1350 nt22.31■■□□□ 1.16
SSK2P53599 WWM1YFL010C 636 nt22.19■■□□□ 1.14
SSK2P53599 HOM6YJR139C 1080 nt22.13■■□□□ 1.13
SSK2P53599 YJR120WYJR120W 351 nt22.12■■□□□ 1.13
SSK2P53599 YOL037CYOL037C 354 nt22.04■■□□□ 1.12
SSK2P53599 YGR021WYGR021W 873 nt22.04■■□□□ 1.12
SSK2P53599 YJR018WYJR018W 363 nt21.95■■□□□ 1.11
SSK2P53599 PUT4YOR348C 1884 nt21.91■■□□□ 1.1
SSK2P53599 ARE1YCR048W 1833 nt21.86■■□□□ 1.09
SSK2P53599 YHR049C-AYHR049C-A 297 nt21.82■■□□□ 1.08
SSK2P53599 RKM5YLR137W 1104 nt21.78■■□□□ 1.08
SSK2P53599 tM(CAU)CtM(CAU)C 72 nt21.74■■□□□ 1.07
SSK2P53599 IMT4tM(CAU)E 72 nt21.74■■□□□ 1.07
SSK2P53599 IMT3tM(CAU)J3 72 nt21.74■■□□□ 1.07
SSK2P53599 IMT1tM(CAU)O1 72 nt21.74■■□□□ 1.07
SSK2P53599 IMT2tM(CAU)P 72 nt21.74■■□□□ 1.07
SSK2P53599 PUN1YLR414C 792 nt21.74■■□□□ 1.07
SSK2P53599 RPP2BYDR382W 333 nt21.62■■□□□ 1.05
SSK2P53599 YFL021C-AYFL021C-A 855 nt21.59■■□□□ 1.05
SSK2P53599 SSA3YBL075C 1950 nt21.57■■□□□ 1.04
SSK2P53599 MOT3YMR070W 1473 nt21.55■■□□□ 1.04
SSK2P53599 PUS2YGL063W 1113 nt21.48■■□□□ 1.03
SSK2P53599 BSC6YOL137W 1494 nt21.44■■□□□ 1.02
SSK2P53599 PTC2YER089C 1395 nt21.43■■□□□ 1.02
SSK2P53599 BDH2YAL061W 1254 nt21.4■■□□□ 1.02
SSK2P53599 POA1YBR022W 534 nt21.35■■□□□ 1.01
SSK2P53599 YLR281CYLR281C 468 nt21.33■■□□□ 1.01
SSK2P53599 BUD23YCR047C 828 nt21.27■■□□□ 1
SSK2P53599 WHI5YOR083W 888 nt21.25■□□□□ 0.99
SSK2P53599 YLR236CYLR236C 324 nt21.2■□□□□ 0.98
SSK2P53599 FIS1YIL065C 468 nt21.19■□□□□ 0.98
SSK2P53599 FMP45YDL222C 930 nt21.13■□□□□ 0.97
SSK2P53599 YBL100CYBL100C 315 nt21.13■□□□□ 0.97
SSK2P53599 FPR4YLR449W 1179 nt21.03■□□□□ 0.96
SSK2P53599 YPR011CYPR011C 981 nt21.02■□□□□ 0.95
SSK2P53599 NAB2YGL122C 1578 nt20.96■□□□□ 0.95
SSK2P53599 PHO4YFR034C 939 nt20.94■□□□□ 0.94
SSK2P53599 DSK2YMR276W 1122 nt20.93■□□□□ 0.94
SSK2P53599 LSM3YLR438C-A 270 nt20.93■□□□□ 0.94
SSK2P53599 DAL1YIR027C 1383 nt20.87■□□□□ 0.93
SSK2P53599 YLR154C-GYLR154C-G 150 nt20.78■□□□□ 0.92
SSK2P53599 INM2YDR287W 879 nt20.76■□□□□ 0.91
SSK2P53599 FUN26YAL022C 1554 nt20.75■□□□□ 0.91
SSK2P53599 LPX1YOR084W 1164 nt20.72■□□□□ 0.91
SSK2P53599 MRPL8YJL063C 717 nt20.71■□□□□ 0.91
SSK2P53599 YCH1YGR203W 447 nt20.68■□□□□ 0.9
SSK2P53599 TRM9YML014W 840 nt20.68■□□□□ 0.9
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms