Protein–RNA interactions for Protein: P04051
RPO31, DNA-directed RNA polymerase III subunit RPC1, yeast
Protein |
RNA |
Prediction (catRAPID) |
Interaction (RIP-Chip) |
Gene |
UniProt Accession |
Gene |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
Detected Interaction |
RPO31 | P04051 | YML009W-B | YML009W-B | 477 nt | | 33,8 | ■■■■□ 3 | |
RPO31 | P04051 | NOP1 | YDL014W | 984 nt | | 32,72 | ■■■□□ 2,83 | |
RPO31 | P04051 | NSR1 | YGR159C | 1245 nt | | 32,39 | ■■■□□ 2,78 | |
RPO31 | P04051 | YKL036C | YKL036C | 393 nt | | 31,13 | ■■■□□ 2,57 | |
RPO31 | P04051 | YJL027C | YJL027C | 417 nt | | 29,29 | ■■■□□ 2,28 | |
RPO31 | P04051 | Q0297 | Q0297 | 156 nt | | 28,95 | ■■■□□ 2,22 | |
RPO31 | P04051 | SCS3 | YGL126W | 1143 nt | | 28,91 | ■■■□□ 2,22 | |
RPO31 | P04051 | SRX1 | YKL086W | 384 nt | | 28,73 | ■■■□□ 2,19 | |
RPO31 | P04051 | MDJ1 | YFL016C | 1536 nt | | 28,56 | ■■■□□ 2,16 | |
RPO31 | P04051 | YCR051W | YCR051W | 669 nt | | 27,52 | ■■■□□ 2 | |
RPO31 | P04051 | YOL085C | YOL085C | 342 nt | | 26,91 | ■■□□□ 1,9 | |
RPO31 | P04051 | PKP1 | YIL042C | 1185 nt | | 26,74 | ■■□□□ 1,87 | |
RPO31 | P04051 | SCJ1 | YMR214W | 1134 nt | | 26,16 | ■■□□□ 1,78 | |
RPO31 | P04051 | RPP1B | YDL130W | 321 nt | | 26,04 | ■■□□□ 1,76 | |
RPO31 | P04051 | ATS1 | YAL020C | 1002 nt | | 25,89 | ■■□□□ 1,73 | |
RPO31 | P04051 | TRN1 | tP(UGG)A | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | SUF9 | tP(UGG)F | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | SUF8 | tP(UGG)H | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | tP(UGG)L | tP(UGG)L | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | SUF7 | tP(UGG)M | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | tP(UGG)N1 | tP(UGG)N1 | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | tP(UGG)N2 | tP(UGG)N2 | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | tP(UGG)O1 | tP(UGG)O1 | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | SUF11 | tP(UGG)O2 | 72 nt | | 25,63 | ■■□□□ 1,69 | |
RPO31 | P04051 | CCC1 | YLR220W | 969 nt | | 25,49 | ■■□□□ 1,67 | |
RPO31 | P04051 | DBP2 | YNL112W | 1641 nt | | 25,39 | ■■□□□ 1,65 | |
RPO31 | P04051 | PET122 | YER153C | 765 nt | | 25,02 | ■■□□□ 1,6 | |
RPO31 | P04051 | SCR1 | SCR1 | 522 nt | | 24,75 | ■■□□□ 1,55 | |
RPO31 | P04051 | tP(UGG)O3 | tP(UGG)O3 | 72 nt | | 24,46 | ■■□□□ 1,51 | |
RPO31 | P04051 | RRN5 | YLR141W | 1092 nt | | 24,23 | ■■□□□ 1,47 | |
RPO31 | P04051 | RTC3 | YHR087W | 336 nt | | 24,19 | ■■□□□ 1,46 | |
RPO31 | P04051 | RSB1 | YOR049C | 1065 nt | | 24,13 | ■■□□□ 1,45 | |
RPO31 | P04051 | RVS167 | YDR388W | 1449 nt | | 23,93 | ■■□□□ 1,42 | |
RPO31 | P04051 | PST2 | YDR032C | 597 nt | | 23,77 | ■■□□□ 1,4 | |
RPO31 | P04051 | YER088W-B | YER088W-B | 147 nt | | 23,76 | ■■□□□ 1,39 | |
RPO31 | P04051 | YBR190W | YBR190W | 312 nt | | 23,71 | ■■□□□ 1,39 | |
RPO31 | P04051 | YDJ1 | YNL064C | 1230 nt | | 23,46 | ■■□□□ 1,35 | |
RPO31 | P04051 | YKL097C | YKL097C | 411 nt | | 23,43 | ■■□□□ 1,34 | |
RPO31 | P04051 | SHR5 | YOL110W | 714 nt | | 23,31 | ■■□□□ 1,32 | |
RPO31 | P04051 | GAR1 | YHR089C | 618 nt | | 23,11 | ■■□□□ 1,29 | |
RPO31 | P04051 | SHU1 | YHL006C | 453 nt | | 22,85 | ■■□□□ 1,25 | |
RPO31 | P04051 | DEP1 | YAL013W | 1218 nt | | 22,7 | ■■□□□ 1,22 | |
RPO31 | P04051 | YAL037C-B | YAL037C-B | 975 nt | | 22,4 | ■■□□□ 1,18 | |
RPO31 | P04051 | YOR139C | YOR139C | 393 nt | | 22,4 | ■■□□□ 1,18 | |
RPO31 | P04051 | URN1 | YPR152C | 1398 nt | | 22,3 | ■■□□□ 1,16 | |
RPO31 | P04051 | TIR1 | YER011W | 765 nt | | 22,2 | ■■□□□ 1,14 | |
RPO31 | P04051 | YNL208W | YNL208W | 600 nt | | 22,07 | ■■□□□ 1,12 | |
RPO31 | P04051 | NPL3 | YDR432W | 1245 nt | | 22 | ■■□□□ 1,11 | |
RPO31 | P04051 | RPN10 | YHR200W | 807 nt | | 21,96 | ■■□□□ 1,11 | |
RPO31 | P04051 | SRB2 | YHR041C | 633 nt | | 21,87 | ■■□□□ 1,09 | |
RPO31 | P04051 | SSA1 | YAL005C | 1929 nt | | 21,83 | ■■□□□ 1,09 | |
RPO31 | P04051 | MNP1 | YGL068W | 585 nt | | 21,82 | ■■□□□ 1,08 | |
RPO31 | P04051 | OPI9 | YLR338W | 858 nt | | 21,63 | ■■□□□ 1,05 | |
RPO31 | P04051 | WWM1 | YFL010C | 636 nt | | 21,5 | ■■□□□ 1,03 | |
RPO31 | P04051 | SAH1 | YER043C | 1350 nt | | 21,49 | ■■□□□ 1,03 | |
RPO31 | P04051 | HOM6 | YJR139C | 1080 nt | | 21,46 | ■■□□□ 1,03 | |
RPO31 | P04051 | YOL037C | YOL037C | 354 nt | | 21,41 | ■■□□□ 1,02 | |
RPO31 | P04051 | YGR021W | YGR021W | 873 nt | | 21,39 | ■■□□□ 1,01 | |
RPO31 | P04051 | tM(CAU)C | tM(CAU)C | 72 nt | | 21,3 | ■■□□□ 1 | |
RPO31 | P04051 | IMT4 | tM(CAU)E | 72 nt | | 21,3 | ■■□□□ 1 | |
RPO31 | P04051 | IMT3 | tM(CAU)J3 | 72 nt | | 21,3 | ■■□□□ 1 | |
RPO31 | P04051 | IMT1 | tM(CAU)O1 | 72 nt | | 21,3 | ■■□□□ 1 | |
RPO31 | P04051 | IMT2 | tM(CAU)P | 72 nt | | 21,3 | ■■□□□ 1 | |
RPO31 | P04051 | YJR120W | YJR120W | 351 nt | | 21,26 | ■□□□□ 0,99 | |
RPO31 | P04051 | YJR018W | YJR018W | 363 nt | | 21,22 | ■□□□□ 0,99 | |
RPO31 | P04051 | RKM5 | YLR137W | 1104 nt | | 21,17 | ■□□□□ 0,98 | |
RPO31 | P04051 | PUT4 | YOR348C | 1884 nt | | 21,03 | ■□□□□ 0,96 | |
RPO31 | P04051 | PUN1 | YLR414C | 792 nt | | 20,99 | ■□□□□ 0,95 | |
RPO31 | P04051 | PUS2 | YGL063W | 1113 nt | | 20,98 | ■□□□□ 0,95 | |
RPO31 | P04051 | ARE1 | YCR048W | 1833 nt | | 20,97 | ■□□□□ 0,95 | |
RPO31 | P04051 | RPP2B | YDR382W | 333 nt | | 20,94 | ■□□□□ 0,94 | |
RPO31 | P04051 | MOT3 | YMR070W | 1473 nt | | 20,94 | ■□□□□ 0,94 | |
RPO31 | P04051 | YFL021C-A | YFL021C-A | 855 nt | | 20,93 | ■□□□□ 0,94 | |
RPO31 | P04051 | YHR049C-A | YHR049C-A | 297 nt | | 20,9 | ■□□□□ 0,94 | |
RPO31 | P04051 | SSA3 | YBL075C | 1950 nt | | 20,78 | ■□□□□ 0,92 | |
RPO31 | P04051 | YLR281C | YLR281C | 468 nt | | 20,77 | ■□□□□ 0,92 | |
RPO31 | P04051 | PTC2 | YER089C | 1395 nt | | 20,71 | ■□□□□ 0,91 | |
RPO31 | P04051 | BDH2 | YAL061W | 1254 nt | | 20,69 | ■□□□□ 0,9 | |
RPO31 | P04051 | WHI5 | YOR083W | 888 nt | | 20,69 | ■□□□□ 0,9 | |
RPO31 | P04051 | BSC6 | YOL137W | 1494 nt | | 20,68 | ■□□□□ 0,9 | |
RPO31 | P04051 | FMP45 | YDL222C | 930 nt | | 20,6 | ■□□□□ 0,89 | |
RPO31 | P04051 | YLR236C | YLR236C | 324 nt | | 20,54 | ■□□□□ 0,88 | |
RPO31 | P04051 | POA1 | YBR022W | 534 nt | | 20,54 | ■□□□□ 0,88 | |
RPO31 | P04051 | BUD23 | YCR047C | 828 nt | | 20,48 | ■□□□□ 0,87 | |
RPO31 | P04051 | YPR011C | YPR011C | 981 nt | | 20,46 | ■□□□□ 0,87 | |
RPO31 | P04051 | YBL100C | YBL100C | 315 nt | | 20,38 | ■□□□□ 0,85 | |
RPO31 | P04051 | DSK2 | YMR276W | 1122 nt | | 20,37 | ■□□□□ 0,85 | |
RPO31 | P04051 | FPR4 | YLR449W | 1179 nt | | 20,36 | ■□□□□ 0,85 | |
RPO31 | P04051 | LSM3 | YLR438C-A | 270 nt | | 20,34 | ■□□□□ 0,85 | |
RPO31 | P04051 | FIS1 | YIL065C | 468 nt | | 20,3 | ■□□□□ 0,84 | |
RPO31 | P04051 | NAB2 | YGL122C | 1578 nt | | 20,2 | ■□□□□ 0,82 | |
RPO31 | P04051 | YCH1 | YGR203W | 447 nt | | 20,2 | ■□□□□ 0,82 | |
RPO31 | P04051 | DAL1 | YIR027C | 1383 nt | | 20,15 | ■□□□□ 0,82 | |
RPO31 | P04051 | INM2 | YDR287W | 879 nt | | 20,12 | ■□□□□ 0,81 | |
RPO31 | P04051 | PHO4 | YFR034C | 939 nt | | 20,12 | ■□□□□ 0,81 | |
RPO31 | P04051 | YLR154C-G | YLR154C-G | 150 nt | | 20,12 | ■□□□□ 0,81 | |
RPO31 | P04051 | LPX1 | YOR084W | 1164 nt | | 20,1 | ■□□□□ 0,81 | |
RPO31 | P04051 | FUN26 | YAL022C | 1554 nt | | 20,09 | ■□□□□ 0,81 | |
RPO31 | P04051 | MRPL8 | YJL063C | 717 nt | | 20,08 | ■□□□□ 0,81 | |
RPO31 | P04051 | SPP1 | YPL138C | 1062 nt | | 20,08 | ■□□□□ 0,81 | |
Retrieved 100 of 7,029 protein–RNA pairs in 11,2 ms