Protein–RNA interactions for Protein: P04051

RPO31, DNA-directed RNA polymerase III subunit RPC1, yeastyeast

Predictions only

Length 1,460 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPO31P04051 YML009W-BYML009W-B 477 nt33,8■■■■□ 3
RPO31P04051 NOP1YDL014W 984 nt32,72■■■□□ 2,83
RPO31P04051 NSR1YGR159C 1245 nt32,39■■■□□ 2,78
RPO31P04051 YKL036CYKL036C 393 nt31,13■■■□□ 2,57
RPO31P04051 YJL027CYJL027C 417 nt29,29■■■□□ 2,28
RPO31P04051 Q0297Q0297 156 nt28,95■■■□□ 2,22
RPO31P04051 SCS3YGL126W 1143 nt28,91■■■□□ 2,22
RPO31P04051 SRX1YKL086W 384 nt28,73■■■□□ 2,19
RPO31P04051 MDJ1YFL016C 1536 nt28,56■■■□□ 2,16
RPO31P04051 YCR051WYCR051W 669 nt27,52■■■□□ 2
RPO31P04051 YOL085CYOL085C 342 nt26,91■■□□□ 1,9
RPO31P04051 PKP1YIL042C 1185 nt26,74■■□□□ 1,87
RPO31P04051 SCJ1YMR214W 1134 nt26,16■■□□□ 1,78
RPO31P04051 RPP1BYDL130W 321 nt26,04■■□□□ 1,76
RPO31P04051 ATS1YAL020C 1002 nt25,89■■□□□ 1,73
RPO31P04051 TRN1tP(UGG)A 72 nt25,63■■□□□ 1,69
RPO31P04051 SUF9tP(UGG)F 72 nt25,63■■□□□ 1,69
RPO31P04051 SUF8tP(UGG)H 72 nt25,63■■□□□ 1,69
RPO31P04051 tP(UGG)LtP(UGG)L 72 nt25,63■■□□□ 1,69
RPO31P04051 SUF7tP(UGG)M 72 nt25,63■■□□□ 1,69
RPO31P04051 tP(UGG)N1tP(UGG)N1 72 nt25,63■■□□□ 1,69
RPO31P04051 tP(UGG)N2tP(UGG)N2 72 nt25,63■■□□□ 1,69
RPO31P04051 tP(UGG)O1tP(UGG)O1 72 nt25,63■■□□□ 1,69
RPO31P04051 SUF11tP(UGG)O2 72 nt25,63■■□□□ 1,69
RPO31P04051 CCC1YLR220W 969 nt25,49■■□□□ 1,67
RPO31P04051 DBP2YNL112W 1641 nt25,39■■□□□ 1,65
RPO31P04051 PET122YER153C 765 nt25,02■■□□□ 1,6
RPO31P04051 SCR1SCR1 522 nt24,75■■□□□ 1,55
RPO31P04051 tP(UGG)O3tP(UGG)O3 72 nt24,46■■□□□ 1,51
RPO31P04051 RRN5YLR141W 1092 nt24,23■■□□□ 1,47
RPO31P04051 RTC3YHR087W 336 nt24,19■■□□□ 1,46
RPO31P04051 RSB1YOR049C 1065 nt24,13■■□□□ 1,45
RPO31P04051 RVS167YDR388W 1449 nt23,93■■□□□ 1,42
RPO31P04051 PST2YDR032C 597 nt23,77■■□□□ 1,4
RPO31P04051 YER088W-BYER088W-B 147 nt23,76■■□□□ 1,39
RPO31P04051 YBR190WYBR190W 312 nt23,71■■□□□ 1,39
RPO31P04051 YDJ1YNL064C 1230 nt23,46■■□□□ 1,35
RPO31P04051 YKL097CYKL097C 411 nt23,43■■□□□ 1,34
RPO31P04051 SHR5YOL110W 714 nt23,31■■□□□ 1,32
RPO31P04051 GAR1YHR089C 618 nt23,11■■□□□ 1,29
RPO31P04051 SHU1YHL006C 453 nt22,85■■□□□ 1,25
RPO31P04051 DEP1YAL013W 1218 nt22,7■■□□□ 1,22
RPO31P04051 YAL037C-BYAL037C-B 975 nt22,4■■□□□ 1,18
RPO31P04051 YOR139CYOR139C 393 nt22,4■■□□□ 1,18
RPO31P04051 URN1YPR152C 1398 nt22,3■■□□□ 1,16
RPO31P04051 TIR1YER011W 765 nt22,2■■□□□ 1,14
RPO31P04051 YNL208WYNL208W 600 nt22,07■■□□□ 1,12
RPO31P04051 NPL3YDR432W 1245 nt22■■□□□ 1,11
RPO31P04051 RPN10YHR200W 807 nt21,96■■□□□ 1,11
RPO31P04051 SRB2YHR041C 633 nt21,87■■□□□ 1,09
RPO31P04051 SSA1YAL005C 1929 nt21,83■■□□□ 1,09
RPO31P04051 MNP1YGL068W 585 nt21,82■■□□□ 1,08
RPO31P04051 OPI9YLR338W 858 nt21,63■■□□□ 1,05
RPO31P04051 WWM1YFL010C 636 nt21,5■■□□□ 1,03
RPO31P04051 SAH1YER043C 1350 nt21,49■■□□□ 1,03
RPO31P04051 HOM6YJR139C 1080 nt21,46■■□□□ 1,03
RPO31P04051 YOL037CYOL037C 354 nt21,41■■□□□ 1,02
RPO31P04051 YGR021WYGR021W 873 nt21,39■■□□□ 1,01
RPO31P04051 tM(CAU)CtM(CAU)C 72 nt21,3■■□□□ 1
RPO31P04051 IMT4tM(CAU)E 72 nt21,3■■□□□ 1
RPO31P04051 IMT3tM(CAU)J3 72 nt21,3■■□□□ 1
RPO31P04051 IMT1tM(CAU)O1 72 nt21,3■■□□□ 1
RPO31P04051 IMT2tM(CAU)P 72 nt21,3■■□□□ 1
RPO31P04051 YJR120WYJR120W 351 nt21,26■□□□□ 0,99
RPO31P04051 YJR018WYJR018W 363 nt21,22■□□□□ 0,99
RPO31P04051 RKM5YLR137W 1104 nt21,17■□□□□ 0,98
RPO31P04051 PUT4YOR348C 1884 nt21,03■□□□□ 0,96
RPO31P04051 PUN1YLR414C 792 nt20,99■□□□□ 0,95
RPO31P04051 PUS2YGL063W 1113 nt20,98■□□□□ 0,95
RPO31P04051 ARE1YCR048W 1833 nt20,97■□□□□ 0,95
RPO31P04051 RPP2BYDR382W 333 nt20,94■□□□□ 0,94
RPO31P04051 MOT3YMR070W 1473 nt20,94■□□□□ 0,94
RPO31P04051 YFL021C-AYFL021C-A 855 nt20,93■□□□□ 0,94
RPO31P04051 YHR049C-AYHR049C-A 297 nt20,9■□□□□ 0,94
RPO31P04051 SSA3YBL075C 1950 nt20,78■□□□□ 0,92
RPO31P04051 YLR281CYLR281C 468 nt20,77■□□□□ 0,92
RPO31P04051 PTC2YER089C 1395 nt20,71■□□□□ 0,91
RPO31P04051 BDH2YAL061W 1254 nt20,69■□□□□ 0,9
RPO31P04051 WHI5YOR083W 888 nt20,69■□□□□ 0,9
RPO31P04051 BSC6YOL137W 1494 nt20,68■□□□□ 0,9
RPO31P04051 FMP45YDL222C 930 nt20,6■□□□□ 0,89
RPO31P04051 YLR236CYLR236C 324 nt20,54■□□□□ 0,88
RPO31P04051 POA1YBR022W 534 nt20,54■□□□□ 0,88
RPO31P04051 BUD23YCR047C 828 nt20,48■□□□□ 0,87
RPO31P04051 YPR011CYPR011C 981 nt20,46■□□□□ 0,87
RPO31P04051 YBL100CYBL100C 315 nt20,38■□□□□ 0,85
RPO31P04051 DSK2YMR276W 1122 nt20,37■□□□□ 0,85
RPO31P04051 FPR4YLR449W 1179 nt20,36■□□□□ 0,85
RPO31P04051 LSM3YLR438C-A 270 nt20,34■□□□□ 0,85
RPO31P04051 FIS1YIL065C 468 nt20,3■□□□□ 0,84
RPO31P04051 NAB2YGL122C 1578 nt20,2■□□□□ 0,82
RPO31P04051 YCH1YGR203W 447 nt20,2■□□□□ 0,82
RPO31P04051 DAL1YIR027C 1383 nt20,15■□□□□ 0,82
RPO31P04051 INM2YDR287W 879 nt20,12■□□□□ 0,81
RPO31P04051 PHO4YFR034C 939 nt20,12■□□□□ 0,81
RPO31P04051 YLR154C-GYLR154C-G 150 nt20,12■□□□□ 0,81
RPO31P04051 LPX1YOR084W 1164 nt20,1■□□□□ 0,81
RPO31P04051 FUN26YAL022C 1554 nt20,09■□□□□ 0,81
RPO31P04051 MRPL8YJL063C 717 nt20,08■□□□□ 0,81
RPO31P04051 SPP1YPL138C 1062 nt20,08■□□□□ 0,81
Retrieved 100 of 7,029 protein–RNA pairs in 11,2 ms