Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 YML009W-BYML009W-B 477 nt35.93■■■■□ 3.34
XRN1P22147 NOP1YDL014W 984 nt34.82■■■■□ 3.16
XRN1P22147 NSR1YGR159C 1245 nt34.53■■■■□ 3.12
XRN1P22147 YKL036CYKL036C 393 nt33.15■■■□□ 2.9
XRN1P22147 YJL027CYJL027C 417 nt31.13■■■□□ 2.57
XRN1P22147 Q0297Q0297 156 nt30.88■■■□□ 2.53
XRN1P22147 SCS3YGL126W 1143 nt30.8■■■□□ 2.52
XRN1P22147 SRX1YKL086W 384 nt30.63■■■□□ 2.49
XRN1P22147 MDJ1YFL016C 1536 nt30.38■■■□□ 2.45
XRN1P22147 YCR051WYCR051W 669 nt29.24■■■□□ 2.27
XRN1P22147 YOL085CYOL085C 342 nt28.66■■■□□ 2.18
XRN1P22147 PKP1YIL042C 1185 nt28.39■■■□□ 2.14
XRN1P22147 SCJ1YMR214W 1134 nt27.92■■■□□ 2.06
XRN1P22147 RPP1BYDL130W 321 nt27.74■■■□□ 2.03
XRN1P22147 ATS1YAL020C 1002 nt27.58■■■□□ 2.01
XRN1P22147 TRN1tP(UGG)A 72 nt27.32■■□□□ 1.96
XRN1P22147 SUF9tP(UGG)F 72 nt27.32■■□□□ 1.96
XRN1P22147 SUF8tP(UGG)H 72 nt27.32■■□□□ 1.96
XRN1P22147 tP(UGG)LtP(UGG)L 72 nt27.32■■□□□ 1.96
XRN1P22147 SUF7tP(UGG)M 72 nt27.32■■□□□ 1.96
XRN1P22147 tP(UGG)N1tP(UGG)N1 72 nt27.32■■□□□ 1.96
XRN1P22147 tP(UGG)N2tP(UGG)N2 72 nt27.32■■□□□ 1.96
XRN1P22147 tP(UGG)O1tP(UGG)O1 72 nt27.32■■□□□ 1.96
XRN1P22147 SUF11tP(UGG)O2 72 nt27.32■■□□□ 1.96
XRN1P22147 DBP2YNL112W 1641 nt27.11■■□□□ 1.93
XRN1P22147 CCC1YLR220W 969 nt27.07■■□□□ 1.92
XRN1P22147 PET122YER153C 765 nt26.65■■□□□ 1.86
XRN1P22147 SCR1SCR1 522 nt26.32■■□□□ 1.8
XRN1P22147 tP(UGG)O3tP(UGG)O3 72 nt26.06■■□□□ 1.76
XRN1P22147 RRN5YLR141W 1092 nt25.78■■□□□ 1.72
XRN1P22147 RTC3YHR087W 336 nt25.73■■□□□ 1.71
XRN1P22147 RSB1YOR049C 1065 nt25.63■■□□□ 1.69
XRN1P22147 RVS167YDR388W 1449 nt25.45■■□□□ 1.66
XRN1P22147 PST2YDR032C 597 nt25.36■■□□□ 1.65
XRN1P22147 YER088W-BYER088W-B 147 nt25.32■■□□□ 1.64
XRN1P22147 YBR190WYBR190W 312 nt25.29■■□□□ 1.64
XRN1P22147 YDJ1YNL064C 1230 nt25.03■■□□□ 1.6
XRN1P22147 YKL097CYKL097C 411 nt24.91■■□□□ 1.58
XRN1P22147 SHR5YOL110W 714 nt24.84■■□□□ 1.57
XRN1P22147 GAR1YHR089C 618 nt24.56■■□□□ 1.52
XRN1P22147 SHU1YHL006C 453 nt24.34■■□□□ 1.49
XRN1P22147 DEP1YAL013W 1218 nt24.1■■□□□ 1.45
XRN1P22147 YOR139CYOR139C 393 nt23.89■■□□□ 1.42
XRN1P22147 YAL037C-BYAL037C-B 975 nt23.81■■□□□ 1.4
XRN1P22147 URN1YPR152C 1398 nt23.74■■□□□ 1.39
XRN1P22147 TIR1YER011W 765 nt23.64■■□□□ 1.37
XRN1P22147 YNL208WYNL208W 600 nt23.49■■□□□ 1.35
XRN1P22147 NPL3YDR432W 1245 nt23.38■■□□□ 1.33
XRN1P22147 RPN10YHR200W 807 nt23.34■■□□□ 1.33
XRN1P22147 SRB2YHR041C 633 nt23.31■■□□□ 1.32
XRN1P22147 SSA1YAL005C 1929 nt23.26■■□□□ 1.31
XRN1P22147 MNP1YGL068W 585 nt23.2■■□□□ 1.3
XRN1P22147 OPI9YLR338W 858 nt23.06■■□□□ 1.28
XRN1P22147 HOM6YJR139C 1080 nt22.89■■□□□ 1.26
XRN1P22147 WWM1YFL010C 636 nt22.88■■□□□ 1.25
XRN1P22147 SAH1YER043C 1350 nt22.87■■□□□ 1.25
XRN1P22147 YOL037CYOL037C 354 nt22.81■■□□□ 1.24
XRN1P22147 YGR021WYGR021W 873 nt22.78■■□□□ 1.24
XRN1P22147 YJR120WYJR120W 351 nt22.71■■□□□ 1.23
XRN1P22147 tM(CAU)CtM(CAU)C 72 nt22.7■■□□□ 1.22
XRN1P22147 IMT4tM(CAU)E 72 nt22.7■■□□□ 1.22
XRN1P22147 IMT3tM(CAU)J3 72 nt22.7■■□□□ 1.22
XRN1P22147 IMT1tM(CAU)O1 72 nt22.7■■□□□ 1.22
XRN1P22147 IMT2tM(CAU)P 72 nt22.7■■□□□ 1.22
XRN1P22147 YJR018WYJR018W 363 nt22.58■■□□□ 1.21
XRN1P22147 RKM5YLR137W 1104 nt22.54■■□□□ 1.2
XRN1P22147 PUT4YOR348C 1884 nt22.46■■□□□ 1.19
XRN1P22147 ARE1YCR048W 1833 nt22.39■■□□□ 1.18
XRN1P22147 PUN1YLR414C 792 nt22.35■■□□□ 1.17
XRN1P22147 MOT3YMR070W 1473 nt22.31■■□□□ 1.16
XRN1P22147 YFL021C-AYFL021C-A 855 nt22.31■■□□□ 1.16
XRN1P22147 PUS2YGL063W 1113 nt22.31■■□□□ 1.16
XRN1P22147 SSA3YBL075C 1950 nt22.3■■□□□ 1.16
XRN1P22147 RPP2BYDR382W 333 nt22.26■■□□□ 1.15
XRN1P22147 YHR049C-AYHR049C-A 297 nt22.24■■□□□ 1.15
XRN1P22147 YLR281CYLR281C 468 nt22.16■■□□□ 1.14
XRN1P22147 BDH2YAL061W 1254 nt22.06■■□□□ 1.12
XRN1P22147 WHI5YOR083W 888 nt22.03■■□□□ 1.12
XRN1P22147 PTC2YER089C 1395 nt22.03■■□□□ 1.12
XRN1P22147 BSC6YOL137W 1494 nt21.95■■□□□ 1.1
XRN1P22147 YLR236CYLR236C 324 nt21.88■■□□□ 1.09
XRN1P22147 FMP45YDL222C 930 nt21.87■■□□□ 1.09
XRN1P22147 POA1YBR022W 534 nt21.86■■□□□ 1.09
XRN1P22147 YPR011CYPR011C 981 nt21.83■■□□□ 1.09
XRN1P22147 BUD23YCR047C 828 nt21.72■■□□□ 1.07
XRN1P22147 LSM3YLR438C-A 270 nt21.7■■□□□ 1.06
XRN1P22147 YBL100CYBL100C 315 nt21.69■■□□□ 1.06
XRN1P22147 DSK2YMR276W 1122 nt21.68■■□□□ 1.06
XRN1P22147 FIS1YIL065C 468 nt21.65■■□□□ 1.06
XRN1P22147 FPR4YLR449W 1179 nt21.56■■□□□ 1.04
XRN1P22147 NAB2YGL122C 1578 nt21.53■■□□□ 1.04
XRN1P22147 YCH1YGR203W 447 nt21.51■■□□□ 1.03
XRN1P22147 DAL1YIR027C 1383 nt21.46■■□□□ 1.03
XRN1P22147 MRPL8YJL063C 717 nt21.45■■□□□ 1.02
XRN1P22147 YLR154C-GYLR154C-G 150 nt21.45■■□□□ 1.02
XRN1P22147 INM2YDR287W 879 nt21.44■■□□□ 1.02
XRN1P22147 PHO4YFR034C 939 nt21.44■■□□□ 1.02
XRN1P22147 LPX1YOR084W 1164 nt21.39■■□□□ 1.02
XRN1P22147 FUN26YAL022C 1554 nt21.38■■□□□ 1.01
XRN1P22147 TRM9YML014W 840 nt21.35■■□□□ 1.01
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms