Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 VAR1Q0140 1197 nt22.44■■□□□ 1.18
YCK3P39962 Q0017Q0017 162 nt20.88■□□□□ 0.93
YCK3P39962 YGR139WYGR139W 339 nt20.4■□□□□ 0.86
YCK3P39962 Q0142Q0142 177 nt20.17■□□□□ 0.82
YCK3P39962 YDR509WYDR509W 348 nt20.01■□□□□ 0.79
YCK3P39962 Q0255Q0255 1419 nt19.11■□□□□ 0.65
YCK3P39962 YOR169CYOR169C 465 nt18.97■□□□□ 0.63
YCK3P39962 Q0144Q0144 330 nt18.78■□□□□ 0.6
YCK3P39962 YGL188CYGL188C 174 nt18.68■□□□□ 0.58
YCK3P39962 SEM1YDR363W-A 270 nt18.33■□□□□ 0.52
YCK3P39962 PAM17YKR065C 594 nt18.24■□□□□ 0.51
YCK3P39962 ATP6Q0085 780 nt18.15■□□□□ 0.5
YCK3P39962 AI5_BETAQ0075 1065 nt18.12■□□□□ 0.49
YCK3P39962 AI3Q0060 1248 nt18.09■□□□□ 0.49
YCK3P39962 BMT5YIL096C 1011 nt18.03■□□□□ 0.48
YCK3P39962 RPM1RPM1 483 nt17.94■□□□□ 0.46
YCK3P39962 PAU21YOR394W 495 nt17.87■□□□□ 0.45
YCK3P39962 PAU22YPL282C 495 nt17.87■□□□□ 0.45
YCK3P39962 BUR6YER159C 429 nt17.78■□□□□ 0.44
YCK3P39962 CSM2YIL132C 642 nt17.77■□□□□ 0.44
YCK3P39962 FAR3YMR052W 615 nt17.75■□□□□ 0.43
YCK3P39962 AIR1YIL079C 1083 nt17.73■□□□□ 0.43
YCK3P39962 YCR099CYCR099C 468 nt17.71■□□□□ 0.43
YCK3P39962 ARO7YPR060C 771 nt17.66■□□□□ 0.42
YCK3P39962 YDR008CYDR008C 351 nt17.54■□□□□ 0.4
YCK3P39962 REG2YBR050C 1017 nt17.45■□□□□ 0.38
YCK3P39962 URE2YNL229C 1065 nt17.4■□□□□ 0.38
YCK3P39962 YIR018C-AYIR018C-A 138 nt17.38■□□□□ 0.37
YCK3P39962 YML009W-BYML009W-B 477 nt17.38■□□□□ 0.37
YCK3P39962 Q0010Q0010 387 nt17.33■□□□□ 0.36
YCK3P39962 NSR1YGR159C 1245 nt17.29■□□□□ 0.36
YCK3P39962 SRN2YLR119W 642 nt17.19■□□□□ 0.34
YCK3P39962 PHO92YDR374C 921 nt17.17■□□□□ 0.34
YCK3P39962 YMR119W-AYMR119W-A 375 nt17.15■□□□□ 0.34
YCK3P39962 NME1NME1 340 nt17.1■□□□□ 0.33
YCK3P39962 YHL044WYHL044W 708 nt17.06■□□□□ 0.32
YCK3P39962 KTR3YBR205W 1215 nt17.02■□□□□ 0.32
YCK3P39962 NOP1YDL014W 984 nt16.91■□□□□ 0.3
YCK3P39962 PET20YPL159C 762 nt16.91■□□□□ 0.3
YCK3P39962 ARP10YDR106W 855 nt16.87■□□□□ 0.29
YCK3P39962 AST1YBL069W 1290 nt16.81■□□□□ 0.28
YCK3P39962 HAS1YMR290C 1518 nt16.77■□□□□ 0.28
YCK3P39962 Q0182Q0182 405 nt16.74■□□□□ 0.27
YCK3P39962 YPL168WYPL168W 1293 nt16.74■□□□□ 0.27
YCK3P39962 NEM1YHR004C 1341 nt16.7■□□□□ 0.26
YCK3P39962 YOL150CYOL150C 312 nt16.67■□□□□ 0.26
YCK3P39962 IRC14YOR135C 342 nt16.67■□□□□ 0.26
YCK3P39962 PUS9YDL036C 1389 nt16.64■□□□□ 0.25
YCK3P39962 YIL030W-AYIL030W-A 339 nt16.63■□□□□ 0.25
YCK3P39962 YNR068CYNR068C 819 nt16.62■□□□□ 0.25
YCK3P39962 CUS2YNL286W 858 nt16.58■□□□□ 0.24
YCK3P39962 BI2Q0110 1272 nt16.55■□□□□ 0.24
YCK3P39962 FIP1YJR093C 984 nt16.52■□□□□ 0.24
YCK3P39962 snR78snR78 87 nt16.49■□□□□ 0.23
YCK3P39962 PEX27YOR193W 1131 nt16.48■□□□□ 0.23
YCK3P39962 SKI6YGR195W 741 nt16.43■□□□□ 0.22
YCK3P39962 SCJ1YMR214W 1134 nt16.35■□□□□ 0.21
YCK3P39962 SCEIQ0160 708 nt16.34■□□□□ 0.21
YCK3P39962 STD1YOR047C 1335 nt16.34■□□□□ 0.21
YCK3P39962 GTT3YEL017W 1014 nt16.33■□□□□ 0.2
YCK3P39962 SKG1YKR100C 1068 nt16.31■□□□□ 0.2
YCK3P39962 YAL016C-BYAL016C-B 186 nt16.3■□□□□ 0.2
YCK3P39962 NEJ1YLR265C 1029 nt16.25■□□□□ 0.19
YCK3P39962 IDI1YPL117C 867 nt16.25■□□□□ 0.19
YCK3P39962 UTP6YDR449C 1323 nt16.18■□□□□ 0.18
YCK3P39962 ARA2YMR041C 1008 nt16.17■□□□□ 0.18
YCK3P39962 TGS1YPL157W 948 nt16.1■□□□□ 0.17
YCK3P39962 YHR028W-AYHR028W-A 321 nt16.03■□□□□ 0.16
YCK3P39962 PZF1YPR186C 1290 nt16.01■□□□□ 0.15
YCK3P39962 RER1YCL001W 567 nt16.01■□□□□ 0.15
YCK3P39962 YMR144WYMR144W 1029 nt15.99■□□□□ 0.15
YCK3P39962 YAL026C-AYAL026C-A 438 nt15.97■□□□□ 0.15
YCK3P39962 CCE1YKL011C 1062 nt15.95■□□□□ 0.14
YCK3P39962 YLR283WYLR283W 945 nt15.94■□□□□ 0.14
YCK3P39962 NUF2YOL069W 1356 nt15.93■□□□□ 0.14
YCK3P39962 MPS2YGL075C 1164 nt15.86■□□□□ 0.13
YCK3P39962 ERV29YGR284C 933 nt15.86■□□□□ 0.13
YCK3P39962 ZTA1YBR046C 1005 nt15.82■□□□□ 0.12
YCK3P39962 RPN8YOR261C 1017 nt15.81■□□□□ 0.12
YCK3P39962 CBS1YDL069C 690 nt15.8■□□□□ 0.12
YCK3P39962 COX11YPL132W 903 nt15.8■□□□□ 0.12
YCK3P39962 YNL040WYNL040W 1371 nt15.77■□□□□ 0.12
YCK3P39962 DCI1YOR180C 816 nt15.77■□□□□ 0.12
YCK3P39962 MOT3YMR070W 1473 nt15.77■□□□□ 0.11
YCK3P39962 ERG29YMR134W 714 nt15.76■□□□□ 0.11
YCK3P39962 CHA1YCL064C 1083 nt15.73■□□□□ 0.11
YCK3P39962 ABZ2YMR289W 1125 nt15.7■□□□□ 0.1
YCK3P39962 SET6YPL165C 1122 nt15.68■□□□□ 0.1
YCK3P39962 MCT1YOR221C 1083 nt15.67■□□□□ 0.1
YCK3P39962 YLR122CYLR122C 378 nt15.66■□□□□ 0.1
YCK3P39962 YPR027CYPR027C 834 nt15.66■□□□□ 0.1
YCK3P39962 RAD17YOR368W 1206 nt15.64■□□□□ 0.09
YCK3P39962 YHR054CYHR054C 1065 nt15.62■□□□□ 0.09
YCK3P39962 YKL036CYKL036C 393 nt15.62■□□□□ 0.09
YCK3P39962 YAP6YDR259C 1152 nt15.61■□□□□ 0.09
YCK3P39962 YGR011WYGR011W 327 nt15.61■□□□□ 0.09
YCK3P39962 YHR145CYHR145C 357 nt15.61■□□□□ 0.09
YCK3P39962 RTC4YNL254C 1206 nt15.59■□□□□ 0.09
YCK3P39962 SDS22YKL193C 1017 nt15.56■□□□□ 0.08
YCK3P39962 YLR036CYLR036C 612 nt15.56■□□□□ 0.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms