Protein–RNA interactions for Protein: P35817

BDF1, Bromodomain-containing factor 1, yeastyeast

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF1P35817 YML009W-BYML009W-B 477 nt25.95■■□□□ 1.74
BDF1P35817 NOP1YDL014W 984 nt25.5■■□□□ 1.67
BDF1P35817 NSR1YGR159C 1245 nt25.08■■□□□ 1.61
BDF1P35817 YKL036CYKL036C 393 nt24.2■■□□□ 1.46
BDF1P35817 YJL027CYJL027C 417 nt22.76■■□□□ 1.23
BDF1P35817 Q0297Q0297 156 nt22.51■■□□□ 1.19
BDF1P35817 SCS3YGL126W 1143 nt22.38■■□□□ 1.17
BDF1P35817 SRX1YKL086W 384 nt22.25■■□□□ 1.15
BDF1P35817 MDJ1YFL016C 1536 nt21.62■■□□□ 1.05
BDF1P35817 YCR051WYCR051W 669 nt21.24■□□□□ 0.99
BDF1P35817 YOL085CYOL085C 342 nt20.91■□□□□ 0.94
BDF1P35817 SCJ1YMR214W 1134 nt20.71■□□□□ 0.91
BDF1P35817 PKP1YIL042C 1185 nt20.57■□□□□ 0.88
BDF1P35817 RPP1BYDL130W 321 nt20.22■□□□□ 0.83
BDF1P35817 ATS1YAL020C 1002 nt20.21■□□□□ 0.83
BDF1P35817 TRN1tP(UGG)A 72 nt19.68■□□□□ 0.74
BDF1P35817 SUF9tP(UGG)F 72 nt19.68■□□□□ 0.74
BDF1P35817 SUF8tP(UGG)H 72 nt19.68■□□□□ 0.74
BDF1P35817 tP(UGG)LtP(UGG)L 72 nt19.68■□□□□ 0.74
BDF1P35817 SUF7tP(UGG)M 72 nt19.68■□□□□ 0.74
BDF1P35817 tP(UGG)N1tP(UGG)N1 72 nt19.68■□□□□ 0.74
BDF1P35817 tP(UGG)N2tP(UGG)N2 72 nt19.68■□□□□ 0.74
BDF1P35817 tP(UGG)O1tP(UGG)O1 72 nt19.68■□□□□ 0.74
BDF1P35817 SUF11tP(UGG)O2 72 nt19.68■□□□□ 0.74
BDF1P35817 CCC1YLR220W 969 nt19.57■□□□□ 0.72
BDF1P35817 DBP2YNL112W 1641 nt19.36■□□□□ 0.69
BDF1P35817 SCR1SCR1 522 nt19.28■□□□□ 0.68
BDF1P35817 PET122YER153C 765 nt19.25■□□□□ 0.67
BDF1P35817 RTC3YHR087W 336 nt18.9■□□□□ 0.62
BDF1P35817 tP(UGG)O3tP(UGG)O3 72 nt18.88■□□□□ 0.61
BDF1P35817 RRN5YLR141W 1092 nt18.76■□□□□ 0.59
BDF1P35817 RSB1YOR049C 1065 nt18.65■□□□□ 0.58
BDF1P35817 PST2YDR032C 597 nt18.57■□□□□ 0.56
BDF1P35817 RVS167YDR388W 1449 nt18.48■□□□□ 0.55
BDF1P35817 YER088W-BYER088W-B 147 nt18.39■□□□□ 0.53
BDF1P35817 YKL097CYKL097C 411 nt18.29■□□□□ 0.52
BDF1P35817 YDJ1YNL064C 1230 nt18.23■□□□□ 0.51
BDF1P35817 YBR190WYBR190W 312 nt18.21■□□□□ 0.51
BDF1P35817 YGR139WYGR139W 339 nt18.17■□□□□ 0.5
BDF1P35817 SHR5YOL110W 714 nt17.96■□□□□ 0.47
BDF1P35817 GAR1YHR089C 618 nt17.77■□□□□ 0.44
BDF1P35817 SHU1YHL006C 453 nt17.67■□□□□ 0.42
BDF1P35817 YOR139CYOR139C 393 nt17.36■□□□□ 0.37
BDF1P35817 DEP1YAL013W 1218 nt17.25■□□□□ 0.35
BDF1P35817 YAL037C-BYAL037C-B 975 nt17.2■□□□□ 0.34
BDF1P35817 NPL3YDR432W 1245 nt17.14■□□□□ 0.33
BDF1P35817 TIR1YER011W 765 nt17.11■□□□□ 0.33
BDF1P35817 YNL208WYNL208W 600 nt17.03■□□□□ 0.32
BDF1P35817 URN1YPR152C 1398 nt17.02■□□□□ 0.32
BDF1P35817 RPN10YHR200W 807 nt16.96■□□□□ 0.31
BDF1P35817 VAR1Q0140 1197 nt16.74■□□□□ 0.27
BDF1P35817 SSA1YAL005C 1929 nt16.73■□□□□ 0.27
BDF1P35817 MOT3YMR070W 1473 nt16.67■□□□□ 0.26
BDF1P35817 MNP1YGL068W 585 nt16.64■□□□□ 0.25
BDF1P35817 YOL037CYOL037C 354 nt16.64■□□□□ 0.25
BDF1P35817 tM(CAU)CtM(CAU)C 72 nt16.63■□□□□ 0.25
BDF1P35817 IMT4tM(CAU)E 72 nt16.63■□□□□ 0.25
BDF1P35817 IMT3tM(CAU)J3 72 nt16.63■□□□□ 0.25
BDF1P35817 IMT1tM(CAU)O1 72 nt16.63■□□□□ 0.25
BDF1P35817 IMT2tM(CAU)P 72 nt16.63■□□□□ 0.25
BDF1P35817 YGR021WYGR021W 873 nt16.63■□□□□ 0.25
BDF1P35817 OPI9YLR338W 858 nt16.58■□□□□ 0.24
BDF1P35817 HOM6YJR139C 1080 nt16.57■□□□□ 0.24
BDF1P35817 SRB2YHR041C 633 nt16.56■□□□□ 0.24
BDF1P35817 WWM1YFL010C 636 nt16.49■□□□□ 0.23
BDF1P35817 NME1NME1 340 nt16.49■□□□□ 0.23
BDF1P35817 Q0182Q0182 405 nt16.45■□□□□ 0.22
BDF1P35817 RKM5YLR137W 1104 nt16.35■□□□□ 0.21
BDF1P35817 BSC6YOL137W 1494 nt16.32■□□□□ 0.2
BDF1P35817 SAH1YER043C 1350 nt16.31■□□□□ 0.2
BDF1P35817 PUS2YGL063W 1113 nt16.29■□□□□ 0.2
BDF1P35817 YJR018WYJR018W 363 nt16.28■□□□□ 0.2
BDF1P35817 CSM2YIL132C 642 nt16.24■□□□□ 0.19
BDF1P35817 YFL021C-AYFL021C-A 855 nt16.2■□□□□ 0.18
BDF1P35817 RPP2BYDR382W 333 nt16.19■□□□□ 0.18
BDF1P35817 YLR281CYLR281C 468 nt16.17■□□□□ 0.18
BDF1P35817 PUN1YLR414C 792 nt16.14■□□□□ 0.17
BDF1P35817 YDR509WYDR509W 348 nt16.11■□□□□ 0.17
BDF1P35817 YJR120WYJR120W 351 nt16.11■□□□□ 0.17
BDF1P35817 PAU21YOR394W 495 nt16.08■□□□□ 0.16
BDF1P35817 PAU22YPL282C 495 nt16.08■□□□□ 0.16
BDF1P35817 WHI5YOR083W 888 nt16.03■□□□□ 0.16
BDF1P35817 BDH2YAL061W 1254 nt15.94■□□□□ 0.14
BDF1P35817 PUT4YOR348C 1884 nt15.93■□□□□ 0.14
BDF1P35817 FMP45YDL222C 930 nt15.9■□□□□ 0.14
BDF1P35817 MRPL8YJL063C 717 nt15.9■□□□□ 0.14
BDF1P35817 ARO7YPR060C 771 nt15.9■□□□□ 0.14
BDF1P35817 SSA3YBL075C 1950 nt15.89■□□□□ 0.13
BDF1P35817 ARE1YCR048W 1833 nt15.89■□□□□ 0.13
BDF1P35817 PAM17YKR065C 594 nt15.88■□□□□ 0.13
BDF1P35817 LSM3YLR438C-A 270 nt15.85■□□□□ 0.13
BDF1P35817 PTC2YER089C 1395 nt15.82■□□□□ 0.12
BDF1P35817 DSK2YMR276W 1122 nt15.79■□□□□ 0.12
BDF1P35817 YCH1YGR203W 447 nt15.76■□□□□ 0.11
BDF1P35817 YHR049C-AYHR049C-A 297 nt15.74■□□□□ 0.11
BDF1P35817 YPR011CYPR011C 981 nt15.73■□□□□ 0.11
BDF1P35817 YLR236CYLR236C 324 nt15.69■□□□□ 0.1
BDF1P35817 IMP2'YIL154C 1041 nt15.68■□□□□ 0.1
BDF1P35817 ADO1YJR105W 1023 nt15.67■□□□□ 0.1
BDF1P35817 UBX6YJL048C 1191 nt15.63■□□□□ 0.09
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms