Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 YML009W-BYML009W-B 477 nt38,29■■■■□ 3,72
TY1B-DR4Q07793 NOP1YDL014W 984 nt36,92■■■■□ 3,5
TY1B-DR4Q07793 NSR1YGR159C 1245 nt36,31■■■■□ 3,4
TY1B-DR4Q07793 YKL036CYKL036C 393 nt35,5■■■■□ 3,27
TY1B-DR4Q07793 YJL027CYJL027C 417 nt33,38■■■□□ 2,93
TY1B-DR4Q07793 SCS3YGL126W 1143 nt33,17■■■□□ 2,9
TY1B-DR4Q07793 Q0297Q0297 156 nt32,89■■■□□ 2,86
TY1B-DR4Q07793 SRX1YKL086W 384 nt32,63■■■□□ 2,81
TY1B-DR4Q07793 MDJ1YFL016C 1536 nt31,99■■■□□ 2,71
TY1B-DR4Q07793 YCR051WYCR051W 669 nt31,21■■■□□ 2,59
TY1B-DR4Q07793 YOL085CYOL085C 342 nt30,6■■■□□ 2,49
TY1B-DR4Q07793 PKP1YIL042C 1185 nt30,47■■■□□ 2,47
TY1B-DR4Q07793 SCJ1YMR214W 1134 nt30,18■■■□□ 2,42
TY1B-DR4Q07793 ATS1YAL020C 1002 nt29,64■■■□□ 2,34
TY1B-DR4Q07793 RPP1BYDL130W 321 nt29,53■■■□□ 2,32
TY1B-DR4Q07793 TRN1tP(UGG)A 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 SUF9tP(UGG)F 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 SUF8tP(UGG)H 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 tP(UGG)LtP(UGG)L 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 SUF7tP(UGG)M 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 tP(UGG)N1tP(UGG)N1 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 tP(UGG)N2tP(UGG)N2 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 tP(UGG)O1tP(UGG)O1 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 SUF11tP(UGG)O2 72 nt28,99■■■□□ 2,23
TY1B-DR4Q07793 CCC1YLR220W 969 nt28,74■■■□□ 2,19
TY1B-DR4Q07793 DBP2YNL112W 1641 nt28,53■■■□□ 2,16
TY1B-DR4Q07793 PET122YER153C 765 nt28,46■■■□□ 2,15
TY1B-DR4Q07793 SCR1SCR1 522 nt28,1■■■□□ 2,09
TY1B-DR4Q07793 RTC3YHR087W 336 nt27,93■■■□□ 2,06
TY1B-DR4Q07793 tP(UGG)O3tP(UGG)O3 72 nt27,68■■■□□ 2,02
TY1B-DR4Q07793 RSB1YOR049C 1065 nt27,49■■□□□ 1,99
TY1B-DR4Q07793 RRN5YLR141W 1092 nt27,48■■□□□ 1,99
TY1B-DR4Q07793 PST2YDR032C 597 nt27,19■■□□□ 1,94
TY1B-DR4Q07793 YER088W-BYER088W-B 147 nt26,98■■□□□ 1,91
TY1B-DR4Q07793 YKL097CYKL097C 411 nt26,96■■□□□ 1,91
TY1B-DR4Q07793 RVS167YDR388W 1449 nt26,82■■□□□ 1,88
TY1B-DR4Q07793 YDJ1YNL064C 1230 nt26,5■■□□□ 1,83
TY1B-DR4Q07793 YBR190WYBR190W 312 nt26,36■■□□□ 1,81
TY1B-DR4Q07793 SHR5YOL110W 714 nt26,23■■□□□ 1,79
TY1B-DR4Q07793 SHU1YHL006C 453 nt26,16■■□□□ 1,78
TY1B-DR4Q07793 GAR1YHR089C 618 nt26,07■■□□□ 1,76
TY1B-DR4Q07793 YOR139CYOR139C 393 nt25,82■■□□□ 1,72
TY1B-DR4Q07793 YAL037C-BYAL037C-B 975 nt25,63■■□□□ 1,69
TY1B-DR4Q07793 DEP1YAL013W 1218 nt25,52■■□□□ 1,68
TY1B-DR4Q07793 NPL3YDR432W 1245 nt25,23■■□□□ 1,63
TY1B-DR4Q07793 TIR1YER011W 765 nt25,04■■□□□ 1,6
TY1B-DR4Q07793 URN1YPR152C 1398 nt25,01■■□□□ 1,59
TY1B-DR4Q07793 MNP1YGL068W 585 nt24,93■■□□□ 1,58
TY1B-DR4Q07793 SRB2YHR041C 633 nt24,82■■□□□ 1,56
TY1B-DR4Q07793 YNL208WYNL208W 600 nt24,72■■□□□ 1,55
TY1B-DR4Q07793 SSA1YAL005C 1929 nt24,62■■□□□ 1,53
TY1B-DR4Q07793 RPN10YHR200W 807 nt24,54■■□□□ 1,52
TY1B-DR4Q07793 YOL037CYOL037C 354 nt24,46■■□□□ 1,51
TY1B-DR4Q07793 HOM6YJR139C 1080 nt24,41■■□□□ 1,5
TY1B-DR4Q07793 WWM1YFL010C 636 nt24,39■■□□□ 1,5
TY1B-DR4Q07793 tM(CAU)CtM(CAU)C 72 nt24,39■■□□□ 1,49
TY1B-DR4Q07793 IMT4tM(CAU)E 72 nt24,39■■□□□ 1,49
TY1B-DR4Q07793 IMT3tM(CAU)J3 72 nt24,39■■□□□ 1,49
TY1B-DR4Q07793 IMT1tM(CAU)O1 72 nt24,39■■□□□ 1,49
TY1B-DR4Q07793 IMT2tM(CAU)P 72 nt24,39■■□□□ 1,49
TY1B-DR4Q07793 YGR021WYGR021W 873 nt24,24■■□□□ 1,47
TY1B-DR4Q07793 MOT3YMR070W 1473 nt24,15■■□□□ 1,46
TY1B-DR4Q07793 OPI9YLR338W 858 nt24,13■■□□□ 1,45
TY1B-DR4Q07793 RKM5YLR137W 1104 nt24,02■■□□□ 1,44
TY1B-DR4Q07793 YJR120WYJR120W 351 nt24,01■■□□□ 1,43
TY1B-DR4Q07793 BSC6YOL137W 1494 nt24■■□□□ 1,43
TY1B-DR4Q07793 PUS2YGL063W 1113 nt23,98■■□□□ 1,43
TY1B-DR4Q07793 SAH1YER043C 1350 nt23,97■■□□□ 1,43
TY1B-DR4Q07793 YJR018WYJR018W 363 nt23,75■■□□□ 1,39
TY1B-DR4Q07793 YLR281CYLR281C 468 nt23,69■■□□□ 1,38
TY1B-DR4Q07793 YFL021C-AYFL021C-A 855 nt23,67■■□□□ 1,38
TY1B-DR4Q07793 FMP45YDL222C 930 nt23,56■■□□□ 1,36
TY1B-DR4Q07793 WHI5YOR083W 888 nt23,55■■□□□ 1,36
TY1B-DR4Q07793 SSA3YBL075C 1950 nt23,54■■□□□ 1,36
TY1B-DR4Q07793 YLR236CYLR236C 324 nt23,51■■□□□ 1,35
TY1B-DR4Q07793 RPP2BYDR382W 333 nt23,44■■□□□ 1,34
TY1B-DR4Q07793 YPR011CYPR011C 981 nt23,4■■□□□ 1,34
TY1B-DR4Q07793 PUN1YLR414C 792 nt23,38■■□□□ 1,33
TY1B-DR4Q07793 ARE1YCR048W 1833 nt23,32■■□□□ 1,32
TY1B-DR4Q07793 UBX6YJL048C 1191 nt23,3■■□□□ 1,32
TY1B-DR4Q07793 YHR049C-AYHR049C-A 297 nt23,29■■□□□ 1,32
TY1B-DR4Q07793 BDH2YAL061W 1254 nt23,29■■□□□ 1,32
TY1B-DR4Q07793 PUT4YOR348C 1884 nt23,24■■□□□ 1,31
TY1B-DR4Q07793 DSK2YMR276W 1122 nt23,21■■□□□ 1,31
TY1B-DR4Q07793 MRPL8YJL063C 717 nt23,19■■□□□ 1,3
TY1B-DR4Q07793 YCH1YGR203W 447 nt23,08■■□□□ 1,29
TY1B-DR4Q07793 PTC2YER089C 1395 nt23,02■■□□□ 1,28
TY1B-DR4Q07793 SPP1YPL138C 1062 nt22,99■■□□□ 1,27
TY1B-DR4Q07793 LPX1YOR084W 1164 nt22,98■■□□□ 1,27
TY1B-DR4Q07793 YEL076C-AYEL076C-A 651 nt22,94■■□□□ 1,26
TY1B-DR4Q07793 YEL076CYEL076C 651 nt22,94■■□□□ 1,26
TY1B-DR4Q07793 YLR464WYLR464W 651 nt22,94■■□□□ 1,26
TY1B-DR4Q07793 RTG1YOL067C 534 nt22,9■■□□□ 1,26
TY1B-DR4Q07793 ADO1YJR105W 1023 nt22,87■■□□□ 1,25
TY1B-DR4Q07793 YBL100CYBL100C 315 nt22,86■■□□□ 1,25
TY1B-DR4Q07793 YLR154C-GYLR154C-G 150 nt22,82■■□□□ 1,24
TY1B-DR4Q07793 LSM3YLR438C-A 270 nt22,81■■□□□ 1,24
TY1B-DR4Q07793 BUD23YCR047C 828 nt22,75■■□□□ 1,23
TY1B-DR4Q07793 IMP2'YIL154C 1041 nt22,75■■□□□ 1,23
TY1B-DR4Q07793 FIS1YIL065C 468 nt22,71■■□□□ 1,23
Retrieved 100 of 7,029 protein–RNA pairs in 10,6 ms