Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 YML009W-BYML009W-B 477 nt38.29■■■■□ 3.72
TY1B-DR4Q07793 NOP1YDL014W 984 nt36.92■■■■□ 3.5
TY1B-DR4Q07793 NSR1YGR159C 1245 nt36.31■■■■□ 3.4
TY1B-DR4Q07793 YKL036CYKL036C 393 nt35.5■■■■□ 3.27
TY1B-DR4Q07793 YJL027CYJL027C 417 nt33.38■■■□□ 2.93
TY1B-DR4Q07793 SCS3YGL126W 1143 nt33.17■■■□□ 2.9
TY1B-DR4Q07793 Q0297Q0297 156 nt32.89■■■□□ 2.86
TY1B-DR4Q07793 SRX1YKL086W 384 nt32.63■■■□□ 2.81
TY1B-DR4Q07793 MDJ1YFL016C 1536 nt31.99■■■□□ 2.71
TY1B-DR4Q07793 YCR051WYCR051W 669 nt31.21■■■□□ 2.59
TY1B-DR4Q07793 YOL085CYOL085C 342 nt30.6■■■□□ 2.49
TY1B-DR4Q07793 PKP1YIL042C 1185 nt30.47■■■□□ 2.47
TY1B-DR4Q07793 SCJ1YMR214W 1134 nt30.18■■■□□ 2.42
TY1B-DR4Q07793 ATS1YAL020C 1002 nt29.64■■■□□ 2.34
TY1B-DR4Q07793 RPP1BYDL130W 321 nt29.53■■■□□ 2.32
TY1B-DR4Q07793 TRN1tP(UGG)A 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 SUF9tP(UGG)F 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 SUF8tP(UGG)H 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 tP(UGG)LtP(UGG)L 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 SUF7tP(UGG)M 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 tP(UGG)N1tP(UGG)N1 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 tP(UGG)N2tP(UGG)N2 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 tP(UGG)O1tP(UGG)O1 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 SUF11tP(UGG)O2 72 nt28.99■■■□□ 2.23
TY1B-DR4Q07793 CCC1YLR220W 969 nt28.74■■■□□ 2.19
TY1B-DR4Q07793 DBP2YNL112W 1641 nt28.53■■■□□ 2.16
TY1B-DR4Q07793 PET122YER153C 765 nt28.46■■■□□ 2.15
TY1B-DR4Q07793 SCR1SCR1 522 nt28.1■■■□□ 2.09
TY1B-DR4Q07793 RTC3YHR087W 336 nt27.93■■■□□ 2.06
TY1B-DR4Q07793 tP(UGG)O3tP(UGG)O3 72 nt27.68■■■□□ 2.02
TY1B-DR4Q07793 RSB1YOR049C 1065 nt27.49■■□□□ 1.99
TY1B-DR4Q07793 RRN5YLR141W 1092 nt27.48■■□□□ 1.99
TY1B-DR4Q07793 PST2YDR032C 597 nt27.19■■□□□ 1.94
TY1B-DR4Q07793 YER088W-BYER088W-B 147 nt26.98■■□□□ 1.91
TY1B-DR4Q07793 YKL097CYKL097C 411 nt26.96■■□□□ 1.91
TY1B-DR4Q07793 RVS167YDR388W 1449 nt26.82■■□□□ 1.88
TY1B-DR4Q07793 YDJ1YNL064C 1230 nt26.5■■□□□ 1.83
TY1B-DR4Q07793 YBR190WYBR190W 312 nt26.36■■□□□ 1.81
TY1B-DR4Q07793 SHR5YOL110W 714 nt26.23■■□□□ 1.79
TY1B-DR4Q07793 SHU1YHL006C 453 nt26.16■■□□□ 1.78
TY1B-DR4Q07793 GAR1YHR089C 618 nt26.07■■□□□ 1.76
TY1B-DR4Q07793 YOR139CYOR139C 393 nt25.82■■□□□ 1.72
TY1B-DR4Q07793 YAL037C-BYAL037C-B 975 nt25.63■■□□□ 1.69
TY1B-DR4Q07793 DEP1YAL013W 1218 nt25.52■■□□□ 1.68
TY1B-DR4Q07793 NPL3YDR432W 1245 nt25.23■■□□□ 1.63
TY1B-DR4Q07793 TIR1YER011W 765 nt25.04■■□□□ 1.6
TY1B-DR4Q07793 URN1YPR152C 1398 nt25.01■■□□□ 1.59
TY1B-DR4Q07793 MNP1YGL068W 585 nt24.93■■□□□ 1.58
TY1B-DR4Q07793 SRB2YHR041C 633 nt24.82■■□□□ 1.56
TY1B-DR4Q07793 YNL208WYNL208W 600 nt24.72■■□□□ 1.55
TY1B-DR4Q07793 SSA1YAL005C 1929 nt24.62■■□□□ 1.53
TY1B-DR4Q07793 RPN10YHR200W 807 nt24.54■■□□□ 1.52
TY1B-DR4Q07793 YOL037CYOL037C 354 nt24.46■■□□□ 1.51
TY1B-DR4Q07793 HOM6YJR139C 1080 nt24.41■■□□□ 1.5
TY1B-DR4Q07793 WWM1YFL010C 636 nt24.39■■□□□ 1.5
TY1B-DR4Q07793 tM(CAU)CtM(CAU)C 72 nt24.39■■□□□ 1.49
TY1B-DR4Q07793 IMT4tM(CAU)E 72 nt24.39■■□□□ 1.49
TY1B-DR4Q07793 IMT3tM(CAU)J3 72 nt24.39■■□□□ 1.49
TY1B-DR4Q07793 IMT1tM(CAU)O1 72 nt24.39■■□□□ 1.49
TY1B-DR4Q07793 IMT2tM(CAU)P 72 nt24.39■■□□□ 1.49
TY1B-DR4Q07793 YGR021WYGR021W 873 nt24.24■■□□□ 1.47
TY1B-DR4Q07793 MOT3YMR070W 1473 nt24.15■■□□□ 1.46
TY1B-DR4Q07793 OPI9YLR338W 858 nt24.13■■□□□ 1.45
TY1B-DR4Q07793 RKM5YLR137W 1104 nt24.02■■□□□ 1.44
TY1B-DR4Q07793 YJR120WYJR120W 351 nt24.01■■□□□ 1.43
TY1B-DR4Q07793 BSC6YOL137W 1494 nt24■■□□□ 1.43
TY1B-DR4Q07793 PUS2YGL063W 1113 nt23.98■■□□□ 1.43
TY1B-DR4Q07793 SAH1YER043C 1350 nt23.97■■□□□ 1.43
TY1B-DR4Q07793 YJR018WYJR018W 363 nt23.75■■□□□ 1.39
TY1B-DR4Q07793 YLR281CYLR281C 468 nt23.69■■□□□ 1.38
TY1B-DR4Q07793 YFL021C-AYFL021C-A 855 nt23.67■■□□□ 1.38
TY1B-DR4Q07793 FMP45YDL222C 930 nt23.56■■□□□ 1.36
TY1B-DR4Q07793 WHI5YOR083W 888 nt23.55■■□□□ 1.36
TY1B-DR4Q07793 SSA3YBL075C 1950 nt23.54■■□□□ 1.36
TY1B-DR4Q07793 YLR236CYLR236C 324 nt23.51■■□□□ 1.35
TY1B-DR4Q07793 RPP2BYDR382W 333 nt23.44■■□□□ 1.34
TY1B-DR4Q07793 YPR011CYPR011C 981 nt23.4■■□□□ 1.34
TY1B-DR4Q07793 PUN1YLR414C 792 nt23.38■■□□□ 1.33
TY1B-DR4Q07793 ARE1YCR048W 1833 nt23.32■■□□□ 1.32
TY1B-DR4Q07793 UBX6YJL048C 1191 nt23.3■■□□□ 1.32
TY1B-DR4Q07793 YHR049C-AYHR049C-A 297 nt23.29■■□□□ 1.32
TY1B-DR4Q07793 BDH2YAL061W 1254 nt23.29■■□□□ 1.32
TY1B-DR4Q07793 PUT4YOR348C 1884 nt23.24■■□□□ 1.31
TY1B-DR4Q07793 DSK2YMR276W 1122 nt23.21■■□□□ 1.31
TY1B-DR4Q07793 MRPL8YJL063C 717 nt23.19■■□□□ 1.3
TY1B-DR4Q07793 YCH1YGR203W 447 nt23.08■■□□□ 1.29
TY1B-DR4Q07793 PTC2YER089C 1395 nt23.02■■□□□ 1.28
TY1B-DR4Q07793 SPP1YPL138C 1062 nt22.99■■□□□ 1.27
TY1B-DR4Q07793 LPX1YOR084W 1164 nt22.98■■□□□ 1.27
TY1B-DR4Q07793 YEL076C-AYEL076C-A 651 nt22.94■■□□□ 1.26
TY1B-DR4Q07793 YEL076CYEL076C 651 nt22.94■■□□□ 1.26
TY1B-DR4Q07793 YLR464WYLR464W 651 nt22.94■■□□□ 1.26
TY1B-DR4Q07793 RTG1YOL067C 534 nt22.9■■□□□ 1.26
TY1B-DR4Q07793 ADO1YJR105W 1023 nt22.87■■□□□ 1.25
TY1B-DR4Q07793 YBL100CYBL100C 315 nt22.86■■□□□ 1.25
TY1B-DR4Q07793 YLR154C-GYLR154C-G 150 nt22.82■■□□□ 1.24
TY1B-DR4Q07793 LSM3YLR438C-A 270 nt22.81■■□□□ 1.24
TY1B-DR4Q07793 BUD23YCR047C 828 nt22.75■■□□□ 1.23
TY1B-DR4Q07793 IMP2'YIL154C 1041 nt22.75■■□□□ 1.23
TY1B-DR4Q07793 FIS1YIL065C 468 nt22.71■■□□□ 1.23
Retrieved 100 of 7,029 protein–RNA pairs in 117.7 ms