RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeastyeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB4YOL112W VPS30Q02948 557 aa11.07□□□□□ -0.64
MSB4YOL112W MYO5Q04439 1219 aaKnown RBP11.07□□□□□ -0.64
MSB4YOL112W SRF1Q12516 437 aa11.07□□□□□ -0.64
MSB4YOL112W VID28P40547 921 aa11.06□□□□□ -0.64
MSB4YOL112W ECM23Q02710 187 aa11.06□□□□□ -0.64
MSB4YOL112W RPL8BP29453 256 aaKnown RBP11.06□□□□□ -0.64
MSB4YOL112W MCD4P36051 919 aa11.06□□□□□ -0.64
MSB4YOL112W VAB2P40003 282 aa11.06□□□□□ -0.64
MSB4YOL112W SPO22P40511 975 aa11.06□□□□□ -0.64
MSB4YOL112W UBX5Q06682 500 aa11.06□□□□□ -0.64
MSB4YOL112W NUC1P08466 329 aa11.05□□□□□ -0.64
MSB4YOL112W ERG7P38604 731 aa11.05□□□□□ -0.64
MSB4YOL112W SPR3P41901 512 aa11.05□□□□□ -0.64
MSB4YOL112W CFT2Q12102 859 aaPredicted RBP11.05□□□□□ -0.64
MSB4YOL112W SRP54P20424 541 aaKnown RBP11.04□□□□□ -0.64
MSB4YOL112W SUE1Q06524 206 aa11.04□□□□□ -0.64
MSB4YOL112W YOR111WQ99210 232 aa11.04□□□□□ -0.64
MSB4YOL112W PER1P25625 357 aa11.03□□□□□ -0.64
MSB4YOL112W SOL4P53315 255 aa11.03□□□□□ -0.64
MSB4YOL112W TSR3Q12094 313 aaKnown RBP11.03□□□□□ -0.64
MSB4YOL112W FBP26P32604 452 aa11.02□□□□□ -0.65
MSB4YOL112W AKR1P39010 764 aa11.02□□□□□ -0.65
MSB4YOL112W SGD1Q06132 899 aa11.02□□□□□ -0.65
MSB4YOL112W ECM29P38737 1868 aa11.02□□□□□ -0.65
MSB4YOL112W CDC60P26637 1090 aaKnown RBP11.01□□□□□ -0.65
MSB4YOL112W PHO88P38264 188 aaPredicted RBP11.01□□□□□ -0.65
MSB4YOL112W VPS45P38932 577 aa11.01□□□□□ -0.65
MSB4YOL112W PES4P39684 611 aa11.01□□□□□ -0.65
MSB4YOL112W NCS6P53088 359 aa11.01□□□□□ -0.65
MSB4YOL112W YLR225CQ05948 407 aaKnown RBP11.01□□□□□ -0.65
MSB4YOL112W RAD18P10862 487 aa11□□□□□ -0.65
MSB4YOL112W EPL1P43572 832 aa11□□□□□ -0.65
MSB4YOL112W UTP4Q06679 776 aaKnown RBP11□□□□□ -0.65
MSB4YOL112W RNR2P09938 399 aaKnown RBP11□□□□□ -0.65
MSB4YOL112W SRS2P12954 1174 aa11□□□□□ -0.65
MSB4YOL112W RNR3P21672 869 aaKnown RBP11□□□□□ -0.65
MSB4YOL112W ALG2P43636 503 aa11□□□□□ -0.65
MSB4YOL112W ARP5P53946 755 aa11□□□□□ -0.65
MSB4YOL112W CLF1Q12309 687 aaPredicted RBP11□□□□□ -0.65
MSB4YOL112W SAM1P10659 382 aaKnown RBP10.99□□□□□ -0.65
MSB4YOL112W NDT80P38830 627 aa10.99□□□□□ -0.65
MSB4YOL112W MDM1Q01846 1127 aa10.99□□□□□ -0.65
MSB4YOL112W DSE3Q08729 430 aa10.99□□□□□ -0.65
MSB4YOL112W RLF2Q12495 606 aa10.99□□□□□ -0.65
MSB4YOL112W MATALPHA2P0CY08 210 aa10.98□□□□□ -0.65
MSB4YOL112W HMLALPHA2P0CY09 210 aa10.98□□□□□ -0.65
MSB4YOL112W VMA2P16140 517 aaKnown RBP10.98□□□□□ -0.65
MSB4YOL112W SIS2P36024 562 aa10.98□□□□□ -0.65
MSB4YOL112W MAL31P38156 614 aa10.98□□□□□ -0.65
MSB4YOL112W TMA64Q04600 565 aaKnown RBP10.98□□□□□ -0.65
MSB4YOL112W EUG1P32474 517 aa10.97□□□□□ -0.65
MSB4YOL112W YKE2P52553 114 aa10.97□□□□□ -0.65
MSB4YOL112W ALD6P54115 500 aaKnown RBP10.97□□□□□ -0.65
MSB4YOL112W UTR4P32626 227 aa10.96□□□□□ -0.65
MSB4YOL112W TGL1P34163 548 aa10.96□□□□□ -0.65
MSB4YOL112W TY3A-GQ12173 290 aa10.96□□□□□ -0.65
MSB4YOL112W TY3A-IQ99219 290 aa10.96□□□□□ -0.65
MSB4YOL112W HCA4P20448 770 aaKnown RBP10.95□□□□□ -0.66
MSB4YOL112W DIT2P21595 489 aa10.95□□□□□ -0.66
MSB4YOL112W PKC1P24583 1151 aa10.95□□□□□ -0.66
MSB4YOL112W SHP1P34223 423 aa10.95□□□□□ -0.66
MSB4YOL112W ATG1P53104 897 aa10.95□□□□□ -0.66
MSB4YOL112W ISW2Q08773 1120 aa10.95□□□□□ -0.66
MSB4YOL112W CIT1P00890 479 aa10.94□□□□□ -0.66
MSB4YOL112W MET6P05694 767 aaKnown RBP10.94□□□□□ -0.66
MSB4YOL112W STI1P15705 589 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66not detected
MSB4YOL112W SWI4P25302 1093 aaKnown RBP10.94□□□□□ -0.66
MSB4YOL112W GPB2P39717 880 aa10.94□□□□□ -0.66
MSB4YOL112W YIR014WP40570 242 aa10.94□□□□□ -0.66
MSB4YOL112W ENT3P47160 408 aa10.94□□□□□ -0.66
MSB4YOL112W CTF18P49956 741 aa10.94□□□□□ -0.66
MSB4YOL112W DUS4Q06063 367 aa10.94□□□□□ -0.66
MSB4YOL112W CSC1Q06538 782 aa10.94□□□□□ -0.66
MSB4YOL112W PHR1P05066 565 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
MSB4YOL112W TOM71P38825 639 aaKnown RBP10.93□□□□□ -0.66
MSB4YOL112W ASE1P50275 885 aa10.93□□□□□ -0.66
MSB4YOL112W LSB1P53281 241 aa10.93□□□□□ -0.66
MSB4YOL112W YDR341CQ05506 607 aaKnown RBP10.93□□□□□ -0.66
MSB4YOL112W DUS3Q06053 668 aaKnown RBP10.93□□□□□ -0.66
MSB4YOL112W YLR407WQ06070 228 aa10.93□□□□□ -0.66
MSB4YOL112W SPH1Q06160 661 aa10.93□□□□□ -0.66
MSB4YOL112W FKS1P38631 1876 aaKnown RBP10.93□□□□□ -0.66
MSB4YOL112W BMH2P34730 273 aaKnown RBP10.93□□□□□ -0.66
MSB4YOL112W RXT2P38255 430 aa10.93□□□□□ -0.66
MSB4YOL112W RPN10P38886 268 aaKnown RBP10.93□□□□□ -0.66
MSB4YOL112W PCI8P40512 444 aa10.93□□□□□ -0.66
MSB4YOL112W FMS1P50264 508 aa10.93□□□□□ -0.66
MSB4YOL112W UBP10P53874 792 aaPredicted RBP10.93□□□□□ -0.66
MSB4YOL112W VIP1Q06685 1146 aaKnown RBP10.93□□□□□ -0.66
MSB4YOL112W VPS20Q04272 221 aa10.92□□□□□ -0.66
MSB4YOL112W YKR018CP36114 725 aa10.91□□□□□ -0.66
MSB4YOL112W CTR1P49573 406 aa10.91□□□□□ -0.66
MSB4YOL112W YGR125WP53273 1036 aa10.91□□□□□ -0.66
MSB4YOL112W RKM4Q12504 494 aa10.91□□□□□ -0.66
MSB4YOL112W RPL8AP17076 256 aaKnown RBP10.9□□□□□ -0.66
MSB4YOL112W SRP40P32583 406 aaPredicted RBP10.9□□□□□ -0.66
MSB4YOL112W OPY1P38271 328 aa10.9□□□□□ -0.66
MSB4YOL112W YHL017WP38745 532 aa10.9□□□□□ -0.66
MSB4YOL112W NPA3P47122 385 aa10.9□□□□□ -0.66
MSB4YOL112W BUL2Q03758 920 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms