Protein–RNA interactions for Protein: Q04272

VPS20, Vacuolar protein sorting-associated protein 20, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS20Q04272 NSR1YGR159C 1245 nt23.49■■□□□ 1.35
VPS20Q04272 YML009W-BYML009W-B 477 nt23.39■■□□□ 1.33
VPS20Q04272 NOP1YDL014W 984 nt22.51■■□□□ 1.19
VPS20Q04272 MDJ1YFL016C 1536 nt21.28■■□□□ 1
VPS20Q04272 YKL036CYKL036C 393 nt20.52■□□□□ 0.88
VPS20Q04272 SRX1YKL086W 384 nt19.73■□□□□ 0.75
VPS20Q04272 Q0297Q0297 156 nt19.67■□□□□ 0.74
VPS20Q04272 YJL027CYJL027C 417 nt19.52■□□□□ 0.72
VPS20Q04272 DBP2YNL112W 1641 nt18.72■□□□□ 0.59
VPS20Q04272 YCR051WYCR051W 669 nt18.69■□□□□ 0.58
VPS20Q04272 SCS3YGL126W 1143 nt18.56■□□□□ 0.56
VPS20Q04272 YBR190WYBR190W 312 nt18.15■□□□□ 0.5
VPS20Q04272 TRN1tP(UGG)A 72 nt18.08■□□□□ 0.48
VPS20Q04272 SUF9tP(UGG)F 72 nt18.08■□□□□ 0.48
VPS20Q04272 SUF8tP(UGG)H 72 nt18.08■□□□□ 0.48
VPS20Q04272 tP(UGG)LtP(UGG)L 72 nt18.08■□□□□ 0.48
VPS20Q04272 SUF7tP(UGG)M 72 nt18.08■□□□□ 0.48
VPS20Q04272 tP(UGG)N1tP(UGG)N1 72 nt18.08■□□□□ 0.48
VPS20Q04272 tP(UGG)N2tP(UGG)N2 72 nt18.08■□□□□ 0.48
VPS20Q04272 tP(UGG)O1tP(UGG)O1 72 nt18.08■□□□□ 0.48
VPS20Q04272 SUF11tP(UGG)O2 72 nt18.08■□□□□ 0.48
VPS20Q04272 CCC1YLR220W 969 nt17.88■□□□□ 0.45
VPS20Q04272 YOL085CYOL085C 342 nt17.83■□□□□ 0.44
VPS20Q04272 RTC3YHR087W 336 nt17.71■□□□□ 0.43
VPS20Q04272 RPP1BYDL130W 321 nt17.64■□□□□ 0.41
VPS20Q04272 PKP1YIL042C 1185 nt17.63■□□□□ 0.41
VPS20Q04272 SCJ1YMR214W 1134 nt17.38■□□□□ 0.37
VPS20Q04272 RVS167YDR388W 1449 nt17.36■□□□□ 0.37
VPS20Q04272 tP(UGG)O3tP(UGG)O3 72 nt16.97■□□□□ 0.31
VPS20Q04272 PET122YER153C 765 nt16.95■□□□□ 0.3
VPS20Q04272 PUT4YOR348C 1884 nt16.81■□□□□ 0.28
VPS20Q04272 SHR5YOL110W 714 nt16.73■□□□□ 0.27
VPS20Q04272 SCR1SCR1 522 nt16.55■□□□□ 0.24
VPS20Q04272 URN1YPR152C 1398 nt16.51■□□□□ 0.23
VPS20Q04272 SSA3YBL075C 1950 nt16.49■□□□□ 0.23
VPS20Q04272 ATS1YAL020C 1002 nt16.48■□□□□ 0.23
VPS20Q04272 DEP1YAL013W 1218 nt16.44■□□□□ 0.22
VPS20Q04272 ARE1YCR048W 1833 nt16.42■□□□□ 0.22
VPS20Q04272 RRN5YLR141W 1092 nt16.41■□□□□ 0.22
VPS20Q04272 YDJ1YNL064C 1230 nt16.39■□□□□ 0.21
VPS20Q04272 SAH1YER043C 1350 nt16.35■□□□□ 0.21
VPS20Q04272 OPI9YLR338W 858 nt16.33■□□□□ 0.2
VPS20Q04272 POA1YBR022W 534 nt16.24■□□□□ 0.19
VPS20Q04272 YHR049C-AYHR049C-A 297 nt16.18■□□□□ 0.18
VPS20Q04272 GAR1YHR089C 618 nt16.12■□□□□ 0.17
VPS20Q04272 YER088W-BYER088W-B 147 nt16.09■□□□□ 0.17
VPS20Q04272 RPN10YHR200W 807 nt16.08■□□□□ 0.16
VPS20Q04272 YNL208WYNL208W 600 nt16.06■□□□□ 0.16
VPS20Q04272 BSC6YOL137W 1494 nt15.96■□□□□ 0.14
VPS20Q04272 RSB1YOR049C 1065 nt15.94■□□□□ 0.14
VPS20Q04272 PUN1YLR414C 792 nt15.8■□□□□ 0.12
VPS20Q04272 BUD23YCR047C 828 nt15.75■□□□□ 0.11
VPS20Q04272 PTC2YER089C 1395 nt15.72■□□□□ 0.11
VPS20Q04272 YJR018WYJR018W 363 nt15.7■□□□□ 0.1
VPS20Q04272 TIR1YER011W 765 nt15.58■□□□□ 0.08
VPS20Q04272 SPT5YML010W 3192 nt15.55■□□□□ 0.08
VPS20Q04272 SSA1YAL005C 1929 nt15.53■□□□□ 0.08
VPS20Q04272 YJR120WYJR120W 351 nt15.52■□□□□ 0.08
VPS20Q04272 NAB2YGL122C 1578 nt15.52■□□□□ 0.07
VPS20Q04272 FIS1YIL065C 468 nt15.36■□□□□ 0.05
VPS20Q04272 PST2YDR032C 597 nt15.34■□□□□ 0.05
VPS20Q04272 SRB2YHR041C 633 nt15.31■□□□□ 0.04
VPS20Q04272 DAL1YIR027C 1383 nt15.27■□□□□ 0.04
VPS20Q04272 RPP2BYDR382W 333 nt15.22■□□□□ 0.03
VPS20Q04272 FPR4YLR449W 1179 nt15.22■□□□□ 0.03
VPS20Q04272 PHO4YFR034C 939 nt15.16■□□□□ 0.02
VPS20Q04272 INM2YDR287W 879 nt15.13■□□□□ 0.01
VPS20Q04272 SSA4YER103W 1929 nt15.07■□□□□ 0
VPS20Q04272 MEP2YNL142W 1500 nt15□□□□□ -0.01
VPS20Q04272 YBL100CYBL100C 315 nt14.99□□□□□ -0.01
VPS20Q04272 YPS1YLR120C 1710 nt14.99□□□□□ -0.01
VPS20Q04272 BDH2YAL061W 1254 nt14.93□□□□□ -0.02
VPS20Q04272 WWM1YFL010C 636 nt14.89□□□□□ -0.03
VPS20Q04272 YDR095CYDR095C 411 nt14.84□□□□□ -0.03
VPS20Q04272 SHU1YHL006C 453 nt14.83□□□□□ -0.04
VPS20Q04272 DCW1YKL046C 1350 nt14.83□□□□□ -0.04
VPS20Q04272 FUN26YAL022C 1554 nt14.81□□□□□ -0.04
VPS20Q04272 YHR165W-AYHR165W-A 312 nt14.8□□□□□ -0.04
VPS20Q04272 YAL037C-BYAL037C-B 975 nt14.72□□□□□ -0.05
VPS20Q04272 TRM9YML014W 840 nt14.67□□□□□ -0.06
VPS20Q04272 LSM3YLR438C-A 270 nt14.64□□□□□ -0.07
VPS20Q04272 HOM6YJR139C 1080 nt14.61□□□□□ -0.07
VPS20Q04272 PTP1YDL230W 1008 nt14.6□□□□□ -0.07
VPS20Q04272 ALF1YNL148C 765 nt14.6□□□□□ -0.07
VPS20Q04272 YGR021WYGR021W 873 nt14.59□□□□□ -0.07
VPS20Q04272 CCT6YDR188W 1641 nt14.58□□□□□ -0.08
VPS20Q04272 YFL021C-AYFL021C-A 855 nt14.57□□□□□ -0.08
VPS20Q04272 EMI2YDR516C 1503 nt14.56□□□□□ -0.08
VPS20Q04272 BDF1YLR399C 2061 nt14.55□□□□□ -0.08
VPS20Q04272 CAC2YML102W 1407 nt14.55□□□□□ -0.08
VPS20Q04272 MNP1YGL068W 585 nt14.53□□□□□ -0.08
VPS20Q04272 RPP2AYOL039W 321 nt14.53□□□□□ -0.08
VPS20Q04272 YKL097CYKL097C 411 nt14.5□□□□□ -0.09
VPS20Q04272 SIS1YNL007C 1059 nt14.46□□□□□ -0.09
VPS20Q04272 YBR220CYBR220C 1683 nt14.43□□□□□ -0.1
VPS20Q04272 YDL221WYDL221W 552 nt14.43□□□□□ -0.1
VPS20Q04272 SUF2tP(AGG)C 72 nt14.4□□□□□ -0.1
VPS20Q04272 SUF10tP(AGG)N 72 nt14.4□□□□□ -0.1
VPS20Q04272 RKM5YLR137W 1104 nt14.38□□□□□ -0.11
VPS20Q04272 YMR090WYMR090W 684 nt14.37□□□□□ -0.11
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms