Protein–RNA interactions for Protein: P53946

ARP5, Actin-related protein 5, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ARP5P53946 NSR1YGR159C 1245 nt23.6■■□□□ 1.37
ARP5P53946 YML009W-BYML009W-B 477 nt23.55■■□□□ 1.36
ARP5P53946 NOP1YDL014W 984 nt22.88■■□□□ 1.25
ARP5P53946 MDJ1YFL016C 1536 nt21.02■□□□□ 0.96
ARP5P53946 YKL036CYKL036C 393 nt20.98■□□□□ 0.95
ARP5P53946 Q0297Q0297 156 nt20.01■□□□□ 0.79
ARP5P53946 SRX1YKL086W 384 nt20.01■□□□□ 0.79
ARP5P53946 YJL027CYJL027C 417 nt19.53■□□□□ 0.72
ARP5P53946 SCS3YGL126W 1143 nt19.01■□□□□ 0.63
ARP5P53946 YCR051WYCR051W 669 nt18.91■□□□□ 0.62
ARP5P53946 DBP2YNL112W 1641 nt18.6■□□□□ 0.57
ARP5P53946 YOL085CYOL085C 342 nt18.19■□□□□ 0.5
ARP5P53946 TRN1tP(UGG)A 72 nt18.17■□□□□ 0.5
ARP5P53946 SUF9tP(UGG)F 72 nt18.17■□□□□ 0.5
ARP5P53946 SUF8tP(UGG)H 72 nt18.17■□□□□ 0.5
ARP5P53946 tP(UGG)LtP(UGG)L 72 nt18.17■□□□□ 0.5
ARP5P53946 SUF7tP(UGG)M 72 nt18.17■□□□□ 0.5
ARP5P53946 tP(UGG)N1tP(UGG)N1 72 nt18.17■□□□□ 0.5
ARP5P53946 tP(UGG)N2tP(UGG)N2 72 nt18.17■□□□□ 0.5
ARP5P53946 tP(UGG)O1tP(UGG)O1 72 nt18.17■□□□□ 0.5
ARP5P53946 SUF11tP(UGG)O2 72 nt18.17■□□□□ 0.5
ARP5P53946 YBR190WYBR190W 312 nt18.01■□□□□ 0.47
ARP5P53946 RPP1BYDL130W 321 nt17.94■□□□□ 0.46
ARP5P53946 CCC1YLR220W 969 nt17.92■□□□□ 0.46
ARP5P53946 PKP1YIL042C 1185 nt17.87■□□□□ 0.45
ARP5P53946 RTC3YHR087W 336 nt17.53■□□□□ 0.4
ARP5P53946 RVS167YDR388W 1449 nt17.41■□□□□ 0.38
ARP5P53946 SCJ1YMR214W 1134 nt17.31■□□□□ 0.36
ARP5P53946 PET122YER153C 765 nt17.14■□□□□ 0.33
ARP5P53946 tP(UGG)O3tP(UGG)O3 72 nt17.14■□□□□ 0.33
ARP5P53946 ATS1YAL020C 1002 nt16.98■□□□□ 0.31
ARP5P53946 SCR1SCR1 522 nt16.9■□□□□ 0.3
ARP5P53946 SHR5YOL110W 714 nt16.8■□□□□ 0.28
ARP5P53946 RRN5YLR141W 1092 nt16.63■□□□□ 0.25
ARP5P53946 YDJ1YNL064C 1230 nt16.6■□□□□ 0.25
ARP5P53946 PUT4YOR348C 1884 nt16.46■□□□□ 0.23
ARP5P53946 URN1YPR152C 1398 nt16.39■□□□□ 0.21
ARP5P53946 SSA3YBL075C 1950 nt16.38■□□□□ 0.21
ARP5P53946 YER088W-BYER088W-B 147 nt16.32■□□□□ 0.2
ARP5P53946 DEP1YAL013W 1218 nt16.31■□□□□ 0.2
ARP5P53946 OPI9YLR338W 858 nt16.22■□□□□ 0.19
ARP5P53946 RSB1YOR049C 1065 nt16.22■□□□□ 0.19
ARP5P53946 GAR1YHR089C 618 nt16.2■□□□□ 0.18
ARP5P53946 RPN10YHR200W 807 nt16.12■□□□□ 0.17
ARP5P53946 ARE1YCR048W 1833 nt16.12■□□□□ 0.17
ARP5P53946 SAH1YER043C 1350 nt16.12■□□□□ 0.17
ARP5P53946 YNL208WYNL208W 600 nt16.09■□□□□ 0.17
ARP5P53946 POA1YBR022W 534 nt15.91■□□□□ 0.14
ARP5P53946 YHR049C-AYHR049C-A 297 nt15.87■□□□□ 0.13
ARP5P53946 PST2YDR032C 597 nt15.77■□□□□ 0.12
ARP5P53946 PUN1YLR414C 792 nt15.73■□□□□ 0.11
ARP5P53946 TIR1YER011W 765 nt15.68■□□□□ 0.1
ARP5P53946 YJR018WYJR018W 363 nt15.64■□□□□ 0.09
ARP5P53946 BSC6YOL137W 1494 nt15.59■□□□□ 0.09
ARP5P53946 PTC2YER089C 1395 nt15.54■□□□□ 0.08
ARP5P53946 SSA1YAL005C 1929 nt15.53■□□□□ 0.08
ARP5P53946 BUD23YCR047C 828 nt15.46■□□□□ 0.07
ARP5P53946 YJR120WYJR120W 351 nt15.4■□□□□ 0.06
ARP5P53946 NAB2YGL122C 1578 nt15.38■□□□□ 0.05
ARP5P53946 RPP2BYDR382W 333 nt15.27■□□□□ 0.04
ARP5P53946 SRB2YHR041C 633 nt15.25■□□□□ 0.03
ARP5P53946 DAL1YIR027C 1383 nt15.15■□□□□ 0.02
ARP5P53946 FIS1YIL065C 468 nt15.15■□□□□ 0.02
ARP5P53946 SHU1YHL006C 453 nt15.14■□□□□ 0.01
ARP5P53946 INM2YDR287W 879 nt15.12■□□□□ 0.01
ARP5P53946 SPT5YML010W 3192 nt15.04■□□□□ -0
ARP5P53946 FPR4YLR449W 1179 nt15.04■□□□□ -0
ARP5P53946 YKL097CYKL097C 411 nt15.03■□□□□ -0
ARP5P53946 PHO4YFR034C 939 nt15□□□□□ -0.01
ARP5P53946 BDH2YAL061W 1254 nt14.98□□□□□ -0.01
ARP5P53946 WWM1YFL010C 636 nt14.96□□□□□ -0.01
ARP5P53946 YBL100CYBL100C 315 nt14.93□□□□□ -0.02
ARP5P53946 YAL037C-BYAL037C-B 975 nt14.91□□□□□ -0.02
ARP5P53946 YGR021WYGR021W 873 nt14.86□□□□□ -0.03
ARP5P53946 HOM6YJR139C 1080 nt14.8□□□□□ -0.04
ARP5P53946 LSM3YLR438C-A 270 nt14.78□□□□□ -0.04
ARP5P53946 YPS1YLR120C 1710 nt14.78□□□□□ -0.04
ARP5P53946 FUN26YAL022C 1554 nt14.76□□□□□ -0.05
ARP5P53946 YFL021C-AYFL021C-A 855 nt14.75□□□□□ -0.05
ARP5P53946 TRM9YML014W 840 nt14.69□□□□□ -0.06
ARP5P53946 MNP1YGL068W 585 nt14.67□□□□□ -0.06
ARP5P53946 MEP2YNL142W 1500 nt14.66□□□□□ -0.06
ARP5P53946 YDR095CYDR095C 411 nt14.66□□□□□ -0.06
ARP5P53946 CCT6YDR188W 1641 nt14.59□□□□□ -0.07
ARP5P53946 RKM5YLR137W 1104 nt14.58□□□□□ -0.08
ARP5P53946 YHR165W-AYHR165W-A 312 nt14.57□□□□□ -0.08
ARP5P53946 ALF1YNL148C 765 nt14.54□□□□□ -0.08
ARP5P53946 YOR139CYOR139C 393 nt14.48□□□□□ -0.09
ARP5P53946 SSA4YER103W 1929 nt14.48□□□□□ -0.09
ARP5P53946 SUF2tP(AGG)C 72 nt14.44□□□□□ -0.1
ARP5P53946 SUF10tP(AGG)N 72 nt14.44□□□□□ -0.1
ARP5P53946 YOL037CYOL037C 354 nt14.41□□□□□ -0.1
ARP5P53946 DCW1YKL046C 1350 nt14.41□□□□□ -0.1
ARP5P53946 SIS1YNL007C 1059 nt14.39□□□□□ -0.11
ARP5P53946 RPP2AYOL039W 321 nt14.38□□□□□ -0.11
ARP5P53946 PTP1YDL230W 1008 nt14.36□□□□□ -0.11
ARP5P53946 NPL3YDR432W 1245 nt14.36□□□□□ -0.11
ARP5P53946 EMI2YDR516C 1503 nt14.24□□□□□ -0.13
ARP5P53946 CAC2YML102W 1407 nt14.24□□□□□ -0.13
ARP5P53946 YDL221WYDL221W 552 nt14.15□□□□□ -0.14
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms