Protein–RNA interactions for Protein: P49956

CTF18, Chromosome transmission fidelity protein 18, yeastyeast

Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF18P49956 NSR1YGR159C 1245 nt23.41■■□□□ 1.34
CTF18P49956 YML009W-BYML009W-B 477 nt23.41■■□□□ 1.34
CTF18P49956 NOP1YDL014W 984 nt22.59■■□□□ 1.21
CTF18P49956 MDJ1YFL016C 1536 nt21.06■□□□□ 0.96
CTF18P49956 YKL036CYKL036C 393 nt20.72■□□□□ 0.91
CTF18P49956 SRX1YKL086W 384 nt19.81■□□□□ 0.76
CTF18P49956 Q0297Q0297 156 nt19.78■□□□□ 0.76
CTF18P49956 YJL027CYJL027C 417 nt19.35■□□□□ 0.69
CTF18P49956 SCS3YGL126W 1143 nt18.79■□□□□ 0.6
CTF18P49956 YCR051WYCR051W 669 nt18.76■□□□□ 0.59
CTF18P49956 DBP2YNL112W 1641 nt18.6■□□□□ 0.57
CTF18P49956 TRN1tP(UGG)A 72 nt18.06■□□□□ 0.48
CTF18P49956 SUF9tP(UGG)F 72 nt18.06■□□□□ 0.48
CTF18P49956 SUF8tP(UGG)H 72 nt18.06■□□□□ 0.48
CTF18P49956 tP(UGG)LtP(UGG)L 72 nt18.06■□□□□ 0.48
CTF18P49956 SUF7tP(UGG)M 72 nt18.06■□□□□ 0.48
CTF18P49956 tP(UGG)N1tP(UGG)N1 72 nt18.06■□□□□ 0.48
CTF18P49956 tP(UGG)N2tP(UGG)N2 72 nt18.06■□□□□ 0.48
CTF18P49956 tP(UGG)O1tP(UGG)O1 72 nt18.06■□□□□ 0.48
CTF18P49956 SUF11tP(UGG)O2 72 nt18.06■□□□□ 0.48
CTF18P49956 YOL085CYOL085C 342 nt17.99■□□□□ 0.47
CTF18P49956 YBR190WYBR190W 312 nt17.95■□□□□ 0.46
CTF18P49956 CCC1YLR220W 969 nt17.86■□□□□ 0.45
CTF18P49956 PKP1YIL042C 1185 nt17.77■□□□□ 0.44
CTF18P49956 RPP1BYDL130W 321 nt17.74■□□□□ 0.43
CTF18P49956 RTC3YHR087W 336 nt17.52■□□□□ 0.4
CTF18P49956 SCJ1YMR214W 1134 nt17.3■□□□□ 0.36
CTF18P49956 RVS167YDR388W 1449 nt17.27■□□□□ 0.35
CTF18P49956 PET122YER153C 765 nt17.03■□□□□ 0.32
CTF18P49956 tP(UGG)O3tP(UGG)O3 72 nt17.01■□□□□ 0.31
CTF18P49956 ATS1YAL020C 1002 nt16.73■□□□□ 0.27
CTF18P49956 SCR1SCR1 522 nt16.68■□□□□ 0.26
CTF18P49956 SHR5YOL110W 714 nt16.68■□□□□ 0.26
CTF18P49956 PUT4YOR348C 1884 nt16.52■□□□□ 0.23
CTF18P49956 RRN5YLR141W 1092 nt16.5■□□□□ 0.23
CTF18P49956 YDJ1YNL064C 1230 nt16.43■□□□□ 0.22
CTF18P49956 URN1YPR152C 1398 nt16.37■□□□□ 0.21
CTF18P49956 DEP1YAL013W 1218 nt16.33■□□□□ 0.2
CTF18P49956 YER088W-BYER088W-B 147 nt16.18■□□□□ 0.18
CTF18P49956 ARE1YCR048W 1833 nt16.17■□□□□ 0.18
CTF18P49956 OPI9YLR338W 858 nt16.17■□□□□ 0.18
CTF18P49956 SAH1YER043C 1350 nt16.14■□□□□ 0.17
CTF18P49956 GAR1YHR089C 618 nt16.12■□□□□ 0.17
CTF18P49956 RSB1YOR049C 1065 nt16.06■□□□□ 0.16
CTF18P49956 YNL208WYNL208W 600 nt15.99■□□□□ 0.15
CTF18P49956 RPN10YHR200W 807 nt15.98■□□□□ 0.15
CTF18P49956 POA1YBR022W 534 nt15.97■□□□□ 0.15
CTF18P49956 YHR049C-AYHR049C-A 297 nt15.93■□□□□ 0.14
CTF18P49956 SSA3YBL075C 1950 nt15.88■□□□□ 0.13
CTF18P49956 BSC6YOL137W 1494 nt15.67■□□□□ 0.1
CTF18P49956 PUN1YLR414C 792 nt15.66■□□□□ 0.1
CTF18P49956 YJR018WYJR018W 363 nt15.59■□□□□ 0.09
CTF18P49956 TIR1YER011W 765 nt15.58■□□□□ 0.08
CTF18P49956 PST2YDR032C 597 nt15.55■□□□□ 0.08
CTF18P49956 PTC2YER089C 1395 nt15.54■□□□□ 0.08
CTF18P49956 BUD23YCR047C 828 nt15.52■□□□□ 0.08
CTF18P49956 SSA1YAL005C 1929 nt15.49■□□□□ 0.07
CTF18P49956 YJR120WYJR120W 351 nt15.43■□□□□ 0.06
CTF18P49956 NAB2YGL122C 1578 nt15.33■□□□□ 0.05
CTF18P49956 SRB2YHR041C 633 nt15.28■□□□□ 0.04
CTF18P49956 FIS1YIL065C 468 nt15.17■□□□□ 0.02
CTF18P49956 RPP2BYDR382W 333 nt15.15■□□□□ 0.02
CTF18P49956 SPT5YML010W 3192 nt15.15■□□□□ 0.02
CTF18P49956 DAL1YIR027C 1383 nt15.11■□□□□ 0.01
CTF18P49956 FPR4YLR449W 1179 nt15.06■□□□□ 0
CTF18P49956 INM2YDR287W 879 nt15.02■□□□□ -0
CTF18P49956 PHO4YFR034C 939 nt14.99□□□□□ -0.01
CTF18P49956 SHU1YHL006C 453 nt14.99□□□□□ -0.01
CTF18P49956 WWM1YFL010C 636 nt14.91□□□□□ -0.02
CTF18P49956 BDH2YAL061W 1254 nt14.88□□□□□ -0.03
CTF18P49956 YBL100CYBL100C 315 nt14.88□□□□□ -0.03
CTF18P49956 YAL037C-BYAL037C-B 975 nt14.85□□□□□ -0.03
CTF18P49956 YKL097CYKL097C 411 nt14.78□□□□□ -0.04
CTF18P49956 YPS1YLR120C 1710 nt14.78□□□□□ -0.04
CTF18P49956 MEP2YNL142W 1500 nt14.71□□□□□ -0.05
CTF18P49956 FUN26YAL022C 1554 nt14.71□□□□□ -0.05
CTF18P49956 HOM6YJR139C 1080 nt14.68□□□□□ -0.06
CTF18P49956 YDR095CYDR095C 411 nt14.66□□□□□ -0.06
CTF18P49956 YGR021WYGR021W 873 nt14.66□□□□□ -0.06
CTF18P49956 SSA4YER103W 1929 nt14.63□□□□□ -0.07
CTF18P49956 LSM3YLR438C-A 270 nt14.62□□□□□ -0.07
CTF18P49956 YFL021C-AYFL021C-A 855 nt14.61□□□□□ -0.07
CTF18P49956 MNP1YGL068W 585 nt14.61□□□□□ -0.07
CTF18P49956 TRM9YML014W 840 nt14.6□□□□□ -0.07
CTF18P49956 YHR165W-AYHR165W-A 312 nt14.59□□□□□ -0.07
CTF18P49956 DCW1YKL046C 1350 nt14.54□□□□□ -0.08
CTF18P49956 CCT6YDR188W 1641 nt14.5□□□□□ -0.09
CTF18P49956 ALF1YNL148C 765 nt14.48□□□□□ -0.09
CTF18P49956 RKM5YLR137W 1104 nt14.44□□□□□ -0.1
CTF18P49956 PTP1YDL230W 1008 nt14.4□□□□□ -0.1
CTF18P49956 RPP2AYOL039W 321 nt14.36□□□□□ -0.11
CTF18P49956 SIS1YNL007C 1059 nt14.33□□□□□ -0.12
CTF18P49956 CAC2YML102W 1407 nt14.32□□□□□ -0.12
CTF18P49956 SUF2tP(AGG)C 72 nt14.32□□□□□ -0.12
CTF18P49956 SUF10tP(AGG)N 72 nt14.32□□□□□ -0.12
CTF18P49956 YOR139CYOR139C 393 nt14.32□□□□□ -0.12
CTF18P49956 EMI2YDR516C 1503 nt14.31□□□□□ -0.12
CTF18P49956 YOL037CYOL037C 354 nt14.19□□□□□ -0.14
CTF18P49956 YDL221WYDL221W 552 nt14.17□□□□□ -0.14
CTF18P49956 ART5YGR068C 1761 nt14.15□□□□□ -0.14
Retrieved 100 of 7,029 protein–RNA pairs in 48.9 ms