Protein–RNA interactions for Protein: P40512

PCI8, Cop9 signalosome complex subunit 11, yeastyeast

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCI8P40512 YML009W-BYML009W-B 477 nt23.33■■□□□ 1.33
PCI8P40512 NSR1YGR159C 1245 nt23.14■■□□□ 1.29
PCI8P40512 NOP1YDL014W 984 nt22.61■■□□□ 1.21
PCI8P40512 YKL036CYKL036C 393 nt20.91■□□□□ 0.94
PCI8P40512 MDJ1YFL016C 1536 nt20.62■□□□□ 0.89
PCI8P40512 Q0297Q0297 156 nt19.83■□□□□ 0.77
PCI8P40512 SRX1YKL086W 384 nt19.8■□□□□ 0.76
PCI8P40512 YJL027CYJL027C 417 nt19.53■□□□□ 0.72
PCI8P40512 SCS3YGL126W 1143 nt19.06■□□□□ 0.64
PCI8P40512 YCR051WYCR051W 669 nt18.81■□□□□ 0.6
PCI8P40512 DBP2YNL112W 1641 nt18.26■□□□□ 0.51
PCI8P40512 YOL085CYOL085C 342 nt18.14■□□□□ 0.49
PCI8P40512 PKP1YIL042C 1185 nt17.92■□□□□ 0.46
PCI8P40512 TRN1tP(UGG)A 72 nt17.9■□□□□ 0.46
PCI8P40512 SUF9tP(UGG)F 72 nt17.9■□□□□ 0.46
PCI8P40512 SUF8tP(UGG)H 72 nt17.9■□□□□ 0.46
PCI8P40512 tP(UGG)LtP(UGG)L 72 nt17.9■□□□□ 0.46
PCI8P40512 SUF7tP(UGG)M 72 nt17.9■□□□□ 0.46
PCI8P40512 tP(UGG)N1tP(UGG)N1 72 nt17.9■□□□□ 0.46
PCI8P40512 tP(UGG)N2tP(UGG)N2 72 nt17.9■□□□□ 0.46
PCI8P40512 tP(UGG)O1tP(UGG)O1 72 nt17.9■□□□□ 0.46
PCI8P40512 SUF11tP(UGG)O2 72 nt17.9■□□□□ 0.46
PCI8P40512 RPP1BYDL130W 321 nt17.8■□□□□ 0.44
PCI8P40512 CCC1YLR220W 969 nt17.78■□□□□ 0.44
PCI8P40512 YBR190WYBR190W 312 nt17.51■□□□□ 0.39
PCI8P40512 RTC3YHR087W 336 nt17.16■□□□□ 0.34
PCI8P40512 SCJ1YMR214W 1134 nt17.07■□□□□ 0.32
PCI8P40512 RVS167YDR388W 1449 nt17.05■□□□□ 0.32
PCI8P40512 PET122YER153C 765 nt17.05■□□□□ 0.32
PCI8P40512 ATS1YAL020C 1002 nt17.05■□□□□ 0.32
PCI8P40512 tP(UGG)O3tP(UGG)O3 72 nt16.96■□□□□ 0.31
PCI8P40512 SCR1SCR1 522 nt16.79■□□□□ 0.28
PCI8P40512 RRN5YLR141W 1092 nt16.56■□□□□ 0.24
PCI8P40512 SHR5YOL110W 714 nt16.5■□□□□ 0.23
PCI8P40512 YDJ1YNL064C 1230 nt16.37■□□□□ 0.21
PCI8P40512 YER088W-BYER088W-B 147 nt16.24■□□□□ 0.19
PCI8P40512 RSB1YOR049C 1065 nt16.2■□□□□ 0.18
PCI8P40512 DEP1YAL013W 1218 nt16.11■□□□□ 0.17
PCI8P40512 URN1YPR152C 1398 nt16.07■□□□□ 0.16
PCI8P40512 GAR1YHR089C 618 nt16.06■□□□□ 0.16
PCI8P40512 PUT4YOR348C 1884 nt15.95■□□□□ 0.14
PCI8P40512 OPI9YLR338W 858 nt15.81■□□□□ 0.12
PCI8P40512 PST2YDR032C 597 nt15.8■□□□□ 0.12
PCI8P40512 YNL208WYNL208W 600 nt15.78■□□□□ 0.12
PCI8P40512 SAH1YER043C 1350 nt15.76■□□□□ 0.11
PCI8P40512 RPN10YHR200W 807 nt15.75■□□□□ 0.11
PCI8P40512 ARE1YCR048W 1833 nt15.67■□□□□ 0.1
PCI8P40512 TIR1YER011W 765 nt15.5■□□□□ 0.07
PCI8P40512 POA1YBR022W 534 nt15.47■□□□□ 0.07
PCI8P40512 YHR049C-AYHR049C-A 297 nt15.45■□□□□ 0.06
PCI8P40512 SSA1YAL005C 1929 nt15.35■□□□□ 0.05
PCI8P40512 YJR018WYJR018W 363 nt15.32■□□□□ 0.04
PCI8P40512 PUN1YLR414C 792 nt15.32■□□□□ 0.04
PCI8P40512 PTC2YER089C 1395 nt15.2■□□□□ 0.02
PCI8P40512 SHU1YHL006C 453 nt15.18■□□□□ 0.02
PCI8P40512 SRB2YHR041C 633 nt15.16■□□□□ 0.02
PCI8P40512 YJR120WYJR120W 351 nt15.14■□□□□ 0.01
PCI8P40512 YKL097CYKL097C 411 nt15.14■□□□□ 0.01
PCI8P40512 BSC6YOL137W 1494 nt15.11■□□□□ 0.01
PCI8P40512 BUD23YCR047C 828 nt15.1■□□□□ 0.01
PCI8P40512 YAL037C-BYAL037C-B 975 nt14.99□□□□□ -0.01
PCI8P40512 RPP2BYDR382W 333 nt14.96□□□□□ -0.01
PCI8P40512 NAB2YGL122C 1578 nt14.95□□□□□ -0.02
PCI8P40512 WWM1YFL010C 636 nt14.86□□□□□ -0.03
PCI8P40512 SSA3YBL075C 1950 nt14.8□□□□□ -0.04
PCI8P40512 FIS1YIL065C 468 nt14.77□□□□□ -0.05
PCI8P40512 FPR4YLR449W 1179 nt14.77□□□□□ -0.05
PCI8P40512 DAL1YIR027C 1383 nt14.76□□□□□ -0.05
PCI8P40512 INM2YDR287W 879 nt14.74□□□□□ -0.05
PCI8P40512 BDH2YAL061W 1254 nt14.7□□□□□ -0.06
PCI8P40512 HOM6YJR139C 1080 nt14.69□□□□□ -0.06
PCI8P40512 YGR021WYGR021W 873 nt14.68□□□□□ -0.06
PCI8P40512 MNP1YGL068W 585 nt14.65□□□□□ -0.06
PCI8P40512 PHO4YFR034C 939 nt14.64□□□□□ -0.07
PCI8P40512 YBL100CYBL100C 315 nt14.63□□□□□ -0.07
PCI8P40512 YOR139CYOR139C 393 nt14.59□□□□□ -0.07
PCI8P40512 YFL021C-AYFL021C-A 855 nt14.55□□□□□ -0.08
PCI8P40512 LSM3YLR438C-A 270 nt14.49□□□□□ -0.09
PCI8P40512 FUN26YAL022C 1554 nt14.47□□□□□ -0.09
PCI8P40512 RKM5YLR137W 1104 nt14.46□□□□□ -0.09
PCI8P40512 TRM9YML014W 840 nt14.42□□□□□ -0.1
PCI8P40512 NPL3YDR432W 1245 nt14.41□□□□□ -0.1
PCI8P40512 SPT5YML010W 3192 nt14.41□□□□□ -0.1
PCI8P40512 YPS1YLR120C 1710 nt14.35□□□□□ -0.11
PCI8P40512 YOL037CYOL037C 354 nt14.31□□□□□ -0.12
PCI8P40512 CCT6YDR188W 1641 nt14.27□□□□□ -0.12
PCI8P40512 YDR095CYDR095C 411 nt14.25□□□□□ -0.13
PCI8P40512 ALF1YNL148C 765 nt14.22□□□□□ -0.13
PCI8P40512 YHR165W-AYHR165W-A 312 nt14.19□□□□□ -0.14
PCI8P40512 MEP2YNL142W 1500 nt14.17□□□□□ -0.14
PCI8P40512 SUF2tP(AGG)C 72 nt14.1□□□□□ -0.15
PCI8P40512 SUF10tP(AGG)N 72 nt14.1□□□□□ -0.15
PCI8P40512 YLR281CYLR281C 468 nt14.04□□□□□ -0.16
PCI8P40512 SIS1YNL007C 1059 nt14.04□□□□□ -0.16
PCI8P40512 tM(CAU)CtM(CAU)C 72 nt14.02□□□□□ -0.17
PCI8P40512 IMT4tM(CAU)E 72 nt14.02□□□□□ -0.17
PCI8P40512 IMT3tM(CAU)J3 72 nt14.02□□□□□ -0.17
PCI8P40512 IMT1tM(CAU)O1 72 nt14.02□□□□□ -0.17
PCI8P40512 IMT2tM(CAU)P 72 nt14.02□□□□□ -0.17
PCI8P40512 WHI5YOR083W 888 nt14.01□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms