Protein–RNA interactions for Protein: P25302

SWI4, Regulatory protein SWI4, yeastyeast

Known RBP Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWI4P25302 YML009W-BYML009W-B 477 nt23.38■■□□□ 1.33
SWI4P25302 NSR1YGR159C 1245 nt23.22■■□□□ 1.31
SWI4P25302 NOP1YDL014W 984 nt22.63■■□□□ 1.21
SWI4P25302 YKL036CYKL036C 393 nt20.9■□□□□ 0.94
SWI4P25302 MDJ1YFL016C 1536 nt20.73■□□□□ 0.91
SWI4P25302 Q0297Q0297 156 nt19.83■□□□□ 0.77
SWI4P25302 SRX1YKL086W 384 nt19.81■□□□□ 0.76
SWI4P25302 YJL027CYJL027C 417 nt19.51■□□□□ 0.71
SWI4P25302 SCS3YGL126W 1143 nt19.03■□□□□ 0.64
SWI4P25302 YCR051WYCR051W 669 nt18.83■□□□□ 0.6
SWI4P25302 DBP2YNL112W 1641 nt18.33■□□□□ 0.52
SWI4P25302 YOL085CYOL085C 342 nt18.14■□□□□ 0.49
SWI4P25302 TRN1tP(UGG)A 72 nt17.96■□□□□ 0.47
SWI4P25302 SUF9tP(UGG)F 72 nt17.96■□□□□ 0.47
SWI4P25302 SUF8tP(UGG)H 72 nt17.96■□□□□ 0.47
SWI4P25302 tP(UGG)LtP(UGG)L 72 nt17.96■□□□□ 0.47
SWI4P25302 SUF7tP(UGG)M 72 nt17.96■□□□□ 0.47
SWI4P25302 tP(UGG)N1tP(UGG)N1 72 nt17.96■□□□□ 0.47
SWI4P25302 tP(UGG)N2tP(UGG)N2 72 nt17.96■□□□□ 0.47
SWI4P25302 tP(UGG)O1tP(UGG)O1 72 nt17.96■□□□□ 0.47
SWI4P25302 SUF11tP(UGG)O2 72 nt17.96■□□□□ 0.47
SWI4P25302 PKP1YIL042C 1185 nt17.91■□□□□ 0.46
SWI4P25302 CCC1YLR220W 969 nt17.82■□□□□ 0.44
SWI4P25302 RPP1BYDL130W 321 nt17.81■□□□□ 0.44
SWI4P25302 YBR190WYBR190W 312 nt17.62■□□□□ 0.41
SWI4P25302 RTC3YHR087W 336 nt17.26■□□□□ 0.35
SWI4P25302 SCJ1YMR214W 1134 nt17.15■□□□□ 0.34
SWI4P25302 RVS167YDR388W 1449 nt17.13■□□□□ 0.33
SWI4P25302 PET122YER153C 765 nt17.06■□□□□ 0.32
SWI4P25302 ATS1YAL020C 1002 nt17■□□□□ 0.31
SWI4P25302 tP(UGG)O3tP(UGG)O3 72 nt16.98■□□□□ 0.31
SWI4P25302 SCR1SCR1 522 nt16.79■□□□□ 0.28
SWI4P25302 RRN5YLR141W 1092 nt16.57■□□□□ 0.24
SWI4P25302 SHR5YOL110W 714 nt16.55■□□□□ 0.24
SWI4P25302 YDJ1YNL064C 1230 nt16.39■□□□□ 0.21
SWI4P25302 YER088W-BYER088W-B 147 nt16.23■□□□□ 0.19
SWI4P25302 RSB1YOR049C 1065 nt16.19■□□□□ 0.18
SWI4P25302 DEP1YAL013W 1218 nt16.18■□□□□ 0.18
SWI4P25302 URN1YPR152C 1398 nt16.15■□□□□ 0.18
SWI4P25302 GAR1YHR089C 618 nt16.1■□□□□ 0.17
SWI4P25302 PUT4YOR348C 1884 nt16.06■□□□□ 0.16
SWI4P25302 OPI9YLR338W 858 nt15.9■□□□□ 0.14
SWI4P25302 SAH1YER043C 1350 nt15.86■□□□□ 0.13
SWI4P25302 YNL208WYNL208W 600 nt15.83■□□□□ 0.12
SWI4P25302 RPN10YHR200W 807 nt15.82■□□□□ 0.12
SWI4P25302 ARE1YCR048W 1833 nt15.78■□□□□ 0.12
SWI4P25302 PST2YDR032C 597 nt15.76■□□□□ 0.11
SWI4P25302 POA1YBR022W 534 nt15.59■□□□□ 0.09
SWI4P25302 YHR049C-AYHR049C-A 297 nt15.57■□□□□ 0.08
SWI4P25302 TIR1YER011W 765 nt15.53■□□□□ 0.08
SWI4P25302 PUN1YLR414C 792 nt15.41■□□□□ 0.06
SWI4P25302 YJR018WYJR018W 363 nt15.39■□□□□ 0.05
SWI4P25302 SSA1YAL005C 1929 nt15.39■□□□□ 0.05
SWI4P25302 PTC2YER089C 1395 nt15.28■□□□□ 0.04
SWI4P25302 BSC6YOL137W 1494 nt15.24■□□□□ 0.03
SWI4P25302 BUD23YCR047C 828 nt15.22■□□□□ 0.03
SWI4P25302 YJR120WYJR120W 351 nt15.22■□□□□ 0.03
SWI4P25302 SRB2YHR041C 633 nt15.2■□□□□ 0.02
SWI4P25302 SHU1YHL006C 453 nt15.15■□□□□ 0.02
SWI4P25302 YKL097CYKL097C 411 nt15.08■□□□□ 0
SWI4P25302 NAB2YGL122C 1578 nt15.04■□□□□ -0
SWI4P25302 RPP2BYDR382W 333 nt15.02■□□□□ -0
SWI4P25302 SSA3YBL075C 1950 nt15.01□□□□□ -0.01
SWI4P25302 YAL037C-BYAL037C-B 975 nt14.98□□□□□ -0.01
SWI4P25302 WWM1YFL010C 636 nt14.88□□□□□ -0.03
SWI4P25302 FIS1YIL065C 468 nt14.88□□□□□ -0.03
SWI4P25302 FPR4YLR449W 1179 nt14.85□□□□□ -0.03
SWI4P25302 DAL1YIR027C 1383 nt14.85□□□□□ -0.03
SWI4P25302 INM2YDR287W 879 nt14.81□□□□□ -0.04
SWI4P25302 BDH2YAL061W 1254 nt14.74□□□□□ -0.05
SWI4P25302 PHO4YFR034C 939 nt14.73□□□□□ -0.05
SWI4P25302 YBL100CYBL100C 315 nt14.7□□□□□ -0.06
SWI4P25302 YGR021WYGR021W 873 nt14.69□□□□□ -0.06
SWI4P25302 HOM6YJR139C 1080 nt14.69□□□□□ -0.06
SWI4P25302 MNP1YGL068W 585 nt14.67□□□□□ -0.06
SWI4P25302 YFL021C-AYFL021C-A 855 nt14.57□□□□□ -0.08
SWI4P25302 YOR139CYOR139C 393 nt14.56□□□□□ -0.08
SWI4P25302 FUN26YAL022C 1554 nt14.53□□□□□ -0.08
SWI4P25302 LSM3YLR438C-A 270 nt14.53□□□□□ -0.08
SWI4P25302 SPT5YML010W 3192 nt14.53□□□□□ -0.08
SWI4P25302 RKM5YLR137W 1104 nt14.48□□□□□ -0.09
SWI4P25302 TRM9YML014W 840 nt14.48□□□□□ -0.09
SWI4P25302 YPS1YLR120C 1710 nt14.45□□□□□ -0.1
SWI4P25302 NPL3YDR432W 1245 nt14.37□□□□□ -0.11
SWI4P25302 YDR095CYDR095C 411 nt14.35□□□□□ -0.11
SWI4P25302 CCT6YDR188W 1641 nt14.33□□□□□ -0.12
SWI4P25302 YOL037CYOL037C 354 nt14.31□□□□□ -0.12
SWI4P25302 ALF1YNL148C 765 nt14.3□□□□□ -0.12
SWI4P25302 YHR165W-AYHR165W-A 312 nt14.29□□□□□ -0.12
SWI4P25302 MEP2YNL142W 1500 nt14.29□□□□□ -0.12
SWI4P25302 SUF2tP(AGG)C 72 nt14.17□□□□□ -0.14
SWI4P25302 SUF10tP(AGG)N 72 nt14.17□□□□□ -0.14
SWI4P25302 DCW1YKL046C 1350 nt14.13□□□□□ -0.15
SWI4P25302 SIS1YNL007C 1059 nt14.11□□□□□ -0.15
SWI4P25302 PTP1YDL230W 1008 nt14.09□□□□□ -0.15
SWI4P25302 RPP2AYOL039W 321 nt14.09□□□□□ -0.15
SWI4P25302 YLR281CYLR281C 468 nt14.03□□□□□ -0.16
SWI4P25302 WHI5YOR083W 888 nt14.01□□□□□ -0.17
SWI4P25302 SSA4YER103W 1929 nt14□□□□□ -0.17
SWI4P25302 CAC2YML102W 1407 nt13.98□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms