Protein–RNA interactions for Protein: P53088

NCS6, Cytoplasmic tRNA 2-thiolation protein 1, yeastyeast

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCS6P53088 YML009W-BYML009W-B 477 nt23.3■■□□□ 1.32
NCS6P53088 NOP1YDL014W 984 nt23.03■■□□□ 1.28
NCS6P53088 NSR1YGR159C 1245 nt22.42■■□□□ 1.18
NCS6P53088 YKL036CYKL036C 393 nt22.01■■□□□ 1.11
NCS6P53088 YJL027CYJL027C 417 nt20.72■□□□□ 0.91
NCS6P53088 SCS3YGL126W 1143 nt20.42■□□□□ 0.86
NCS6P53088 Q0297Q0297 156 nt20.39■□□□□ 0.85
NCS6P53088 SRX1YKL086W 384 nt20.09■□□□□ 0.81
NCS6P53088 SCJ1YMR214W 1134 nt19.19■□□□□ 0.66
NCS6P53088 YCR051WYCR051W 669 nt19.16■□□□□ 0.66
NCS6P53088 MDJ1YFL016C 1536 nt19.07■□□□□ 0.64
NCS6P53088 YOL085CYOL085C 342 nt19.02■□□□□ 0.64
NCS6P53088 PKP1YIL042C 1185 nt18.65■□□□□ 0.58
NCS6P53088 ATS1YAL020C 1002 nt18.53■□□□□ 0.56
NCS6P53088 RPP1BYDL130W 321 nt18.31■□□□□ 0.52
NCS6P53088 TRN1tP(UGG)A 72 nt17.63■□□□□ 0.41
NCS6P53088 SUF9tP(UGG)F 72 nt17.63■□□□□ 0.41
NCS6P53088 SUF8tP(UGG)H 72 nt17.63■□□□□ 0.41
NCS6P53088 tP(UGG)LtP(UGG)L 72 nt17.63■□□□□ 0.41
NCS6P53088 SUF7tP(UGG)M 72 nt17.63■□□□□ 0.41
NCS6P53088 tP(UGG)N1tP(UGG)N1 72 nt17.63■□□□□ 0.41
NCS6P53088 tP(UGG)N2tP(UGG)N2 72 nt17.63■□□□□ 0.41
NCS6P53088 tP(UGG)O1tP(UGG)O1 72 nt17.63■□□□□ 0.41
NCS6P53088 SUF11tP(UGG)O2 72 nt17.63■□□□□ 0.41
NCS6P53088 CCC1YLR220W 969 nt17.53■□□□□ 0.4
NCS6P53088 SCR1SCR1 522 nt17.49■□□□□ 0.39
NCS6P53088 RTC3YHR087W 336 nt17.44■□□□□ 0.38
NCS6P53088 PET122YER153C 765 nt17.37■□□□□ 0.37
NCS6P53088 DBP2YNL112W 1641 nt17.18■□□□□ 0.34
NCS6P53088 PST2YDR032C 597 nt17■□□□□ 0.31
NCS6P53088 tP(UGG)O3tP(UGG)O3 72 nt16.99■□□□□ 0.31
NCS6P53088 RRN5YLR141W 1092 nt16.99■□□□□ 0.31
NCS6P53088 RSB1YOR049C 1065 nt16.91■□□□□ 0.3
NCS6P53088 YKL097CYKL097C 411 nt16.81■□□□□ 0.28
NCS6P53088 YER088W-BYER088W-B 147 nt16.64■□□□□ 0.25
NCS6P53088 RVS167YDR388W 1449 nt16.45■□□□□ 0.22
NCS6P53088 YDJ1YNL064C 1230 nt16.43■□□□□ 0.22
NCS6P53088 SHU1YHL006C 453 nt16.1■□□□□ 0.17
NCS6P53088 YBR190WYBR190W 312 nt16.06■□□□□ 0.16
NCS6P53088 SHR5YOL110W 714 nt16.04■□□□□ 0.16
NCS6P53088 GAR1YHR089C 618 nt15.94■□□□□ 0.14
NCS6P53088 YOR139CYOR139C 393 nt15.93■□□□□ 0.14
NCS6P53088 NPL3YDR432W 1245 nt15.68■□□□□ 0.1
NCS6P53088 YAL037C-BYAL037C-B 975 nt15.62■□□□□ 0.09
NCS6P53088 TIR1YER011W 765 nt15.36■□□□□ 0.05
NCS6P53088 DEP1YAL013W 1218 nt15.31■□□□□ 0.04
NCS6P53088 tM(CAU)CtM(CAU)C 72 nt15.27■□□□□ 0.04
NCS6P53088 IMT4tM(CAU)E 72 nt15.27■□□□□ 0.04
NCS6P53088 IMT3tM(CAU)J3 72 nt15.27■□□□□ 0.04
NCS6P53088 IMT1tM(CAU)O1 72 nt15.27■□□□□ 0.04
NCS6P53088 IMT2tM(CAU)P 72 nt15.27■□□□□ 0.04
NCS6P53088 BSC6YOL137W 1494 nt15.21■□□□□ 0.03
NCS6P53088 YNL208WYNL208W 600 nt15.18■□□□□ 0.02
NCS6P53088 RPN10YHR200W 807 nt15.16■□□□□ 0.02
NCS6P53088 YOL037CYOL037C 354 nt15.13■□□□□ 0.01
NCS6P53088 URN1YPR152C 1398 nt15.07■□□□□ 0
NCS6P53088 MOT3YMR070W 1473 nt15.02■□□□□ -0
NCS6P53088 YGR021WYGR021W 873 nt15.02■□□□□ -0
NCS6P53088 MNP1YGL068W 585 nt15.01□□□□□ -0.01
NCS6P53088 HOM6YJR139C 1080 nt14.97□□□□□ -0.01
NCS6P53088 SSA1YAL005C 1929 nt14.96□□□□□ -0.01
NCS6P53088 PUS2YGL063W 1113 nt14.87□□□□□ -0.03
NCS6P53088 WWM1YFL010C 636 nt14.82□□□□□ -0.04
NCS6P53088 SRB2YHR041C 633 nt14.82□□□□□ -0.04
NCS6P53088 RKM5YLR137W 1104 nt14.76□□□□□ -0.05
NCS6P53088 MRPL8YJL063C 717 nt14.75□□□□□ -0.05
NCS6P53088 YLR281CYLR281C 468 nt14.7□□□□□ -0.06
NCS6P53088 OPI9YLR338W 858 nt14.66□□□□□ -0.06
NCS6P53088 YFL021C-AYFL021C-A 855 nt14.58□□□□□ -0.08
NCS6P53088 UBX6YJL048C 1191 nt14.55□□□□□ -0.08
NCS6P53088 WHI5YOR083W 888 nt14.54□□□□□ -0.08
NCS6P53088 ADO1YJR105W 1023 nt14.5□□□□□ -0.09
NCS6P53088 FMP45YDL222C 930 nt14.49□□□□□ -0.09
NCS6P53088 YJR018WYJR018W 363 nt14.44□□□□□ -0.1
NCS6P53088 RPP2BYDR382W 333 nt14.42□□□□□ -0.1
NCS6P53088 YCH1YGR203W 447 nt14.41□□□□□ -0.1
NCS6P53088 PUT4YOR348C 1884 nt14.39□□□□□ -0.11
NCS6P53088 SAH1YER043C 1350 nt14.38□□□□□ -0.11
NCS6P53088 DSK2YMR276W 1122 nt14.33□□□□□ -0.12
NCS6P53088 YPR011CYPR011C 981 nt14.31□□□□□ -0.12
NCS6P53088 YEL076C-AYEL076C-A 651 nt14.3□□□□□ -0.12
NCS6P53088 YEL076CYEL076C 651 nt14.3□□□□□ -0.12
NCS6P53088 YJR120WYJR120W 351 nt14.3□□□□□ -0.12
NCS6P53088 YLR464WYLR464W 651 nt14.3□□□□□ -0.12
NCS6P53088 PUN1YLR414C 792 nt14.27□□□□□ -0.13
NCS6P53088 IMP2'YIL154C 1041 nt14.25□□□□□ -0.13
NCS6P53088 ARE1YCR048W 1833 nt14.23□□□□□ -0.13
NCS6P53088 BDH2YAL061W 1254 nt14.23□□□□□ -0.13
NCS6P53088 LSM3YLR438C-A 270 nt14.22□□□□□ -0.13
NCS6P53088 SSA3YBL075C 1950 nt14.2□□□□□ -0.14
NCS6P53088 YLR236CYLR236C 324 nt14.2□□□□□ -0.14
NCS6P53088 SIS1YNL007C 1059 nt14.11□□□□□ -0.15
NCS6P53088 RTG1YOL067C 534 nt14.07□□□□□ -0.16
NCS6P53088 YFL015W-AYFL015W-A 318 nt14.04□□□□□ -0.16
NCS6P53088 SPP1YPL138C 1062 nt14.01□□□□□ -0.17
NCS6P53088 YDR094WYDR094W 336 nt14□□□□□ -0.17
NCS6P53088 YHR049C-AYHR049C-A 297 nt14□□□□□ -0.17
NCS6P53088 YLR154C-GYLR154C-G 150 nt13.95□□□□□ -0.18
NCS6P53088 PTC2YER089C 1395 nt13.94□□□□□ -0.18
NCS6P53088 LPX1YOR084W 1164 nt13.93□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms