Protein–RNA interactions for Protein: P29453

RPL8B, 60S ribosomal protein L8-B, yeastyeast

Known RBP Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL8BP29453 YML009W-BYML009W-B 477 nt23.59■■□□□ 1.37
RPL8BP29453 NSR1YGR159C 1245 nt23.32■■□□□ 1.32
RPL8BP29453 NOP1YDL014W 984 nt23.01■■□□□ 1.27
RPL8BP29453 YKL036CYKL036C 393 nt21.37■■□□□ 1.01
RPL8BP29453 MDJ1YFL016C 1536 nt20.54■□□□□ 0.88
RPL8BP29453 Q0297Q0297 156 nt20.19■□□□□ 0.82
RPL8BP29453 SRX1YKL086W 384 nt20.1■□□□□ 0.81
RPL8BP29453 YJL027CYJL027C 417 nt19.98■□□□□ 0.79
RPL8BP29453 SCS3YGL126W 1143 nt19.52■□□□□ 0.72
RPL8BP29453 YCR051WYCR051W 669 nt19.08■□□□□ 0.64
RPL8BP29453 YOL085CYOL085C 342 nt18.51■□□□□ 0.55
RPL8BP29453 DBP2YNL112W 1641 nt18.25■□□□□ 0.51
RPL8BP29453 PKP1YIL042C 1185 nt18.21■□□□□ 0.51
RPL8BP29453 RPP1BYDL130W 321 nt18.11■□□□□ 0.49
RPL8BP29453 TRN1tP(UGG)A 72 nt18.07■□□□□ 0.48
RPL8BP29453 SUF9tP(UGG)F 72 nt18.07■□□□□ 0.48
RPL8BP29453 SUF8tP(UGG)H 72 nt18.07■□□□□ 0.48
RPL8BP29453 tP(UGG)LtP(UGG)L 72 nt18.07■□□□□ 0.48
RPL8BP29453 SUF7tP(UGG)M 72 nt18.07■□□□□ 0.48
RPL8BP29453 tP(UGG)N1tP(UGG)N1 72 nt18.07■□□□□ 0.48
RPL8BP29453 tP(UGG)N2tP(UGG)N2 72 nt18.07■□□□□ 0.48
RPL8BP29453 tP(UGG)O1tP(UGG)O1 72 nt18.07■□□□□ 0.48
RPL8BP29453 SUF11tP(UGG)O2 72 nt18.07■□□□□ 0.48
RPL8BP29453 CCC1YLR220W 969 nt17.91■□□□□ 0.46
RPL8BP29453 ATS1YAL020C 1002 nt17.51■□□□□ 0.39
RPL8BP29453 SCJ1YMR214W 1134 nt17.5■□□□□ 0.39
RPL8BP29453 YBR190WYBR190W 312 nt17.49■□□□□ 0.39
RPL8BP29453 PET122YER153C 765 nt17.29■□□□□ 0.36
RPL8BP29453 RVS167YDR388W 1449 nt17.2■□□□□ 0.34
RPL8BP29453 tP(UGG)O3tP(UGG)O3 72 nt17.16■□□□□ 0.34
RPL8BP29453 SCR1SCR1 522 nt17.15■□□□□ 0.34
RPL8BP29453 RTC3YHR087W 336 nt17.11■□□□□ 0.33
RPL8BP29453 RRN5YLR141W 1092 nt16.81■□□□□ 0.28
RPL8BP29453 SHR5YOL110W 714 nt16.63■□□□□ 0.25
RPL8BP29453 YDJ1YNL064C 1230 nt16.6■□□□□ 0.25
RPL8BP29453 RSB1YOR049C 1065 nt16.5■□□□□ 0.23
RPL8BP29453 YER088W-BYER088W-B 147 nt16.48■□□□□ 0.23
RPL8BP29453 GAR1YHR089C 618 nt16.2■□□□□ 0.18
RPL8BP29453 PST2YDR032C 597 nt16.19■□□□□ 0.18
RPL8BP29453 DEP1YAL013W 1218 nt16.11■□□□□ 0.17
RPL8BP29453 URN1YPR152C 1398 nt16.07■□□□□ 0.16
RPL8BP29453 YNL208WYNL208W 600 nt15.88■□□□□ 0.13
RPL8BP29453 RPN10YHR200W 807 nt15.87■□□□□ 0.13
RPL8BP29453 OPI9YLR338W 858 nt15.81■□□□□ 0.12
RPL8BP29453 PUT4YOR348C 1884 nt15.76■□□□□ 0.11
RPL8BP29453 SAH1YER043C 1350 nt15.67■□□□□ 0.1
RPL8BP29453 TIR1YER011W 765 nt15.65■□□□□ 0.1
RPL8BP29453 YKL097CYKL097C 411 nt15.63■□□□□ 0.09
RPL8BP29453 ARE1YCR048W 1833 nt15.52■□□□□ 0.08
RPL8BP29453 SHU1YHL006C 453 nt15.49■□□□□ 0.07
RPL8BP29453 SSA1YAL005C 1929 nt15.44■□□□□ 0.06
RPL8BP29453 YJR018WYJR018W 363 nt15.35■□□□□ 0.05
RPL8BP29453 PUN1YLR414C 792 nt15.35■□□□□ 0.05
RPL8BP29453 YHR049C-AYHR049C-A 297 nt15.31■□□□□ 0.04
RPL8BP29453 POA1YBR022W 534 nt15.28■□□□□ 0.04
RPL8BP29453 YAL037C-BYAL037C-B 975 nt15.21■□□□□ 0.03
RPL8BP29453 SRB2YHR041C 633 nt15.2■□□□□ 0.02
RPL8BP29453 YJR120WYJR120W 351 nt15.14■□□□□ 0.01
RPL8BP29453 PTC2YER089C 1395 nt15.13■□□□□ 0.01
RPL8BP29453 RPP2BYDR382W 333 nt15.08■□□□□ 0
RPL8BP29453 WWM1YFL010C 636 nt14.99□□□□□ -0.01
RPL8BP29453 BUD23YCR047C 828 nt14.98□□□□□ -0.01
RPL8BP29453 YOR139CYOR139C 393 nt14.97□□□□□ -0.01
RPL8BP29453 YGR021WYGR021W 873 nt14.95□□□□□ -0.02
RPL8BP29453 NAB2YGL122C 1578 nt14.92□□□□□ -0.02
RPL8BP29453 HOM6YJR139C 1080 nt14.91□□□□□ -0.02
RPL8BP29453 BSC6YOL137W 1494 nt14.9□□□□□ -0.02
RPL8BP29453 MNP1YGL068W 585 nt14.85□□□□□ -0.03
RPL8BP29453 NPL3YDR432W 1245 nt14.82□□□□□ -0.04
RPL8BP29453 BDH2YAL061W 1254 nt14.81□□□□□ -0.04
RPL8BP29453 INM2YDR287W 879 nt14.79□□□□□ -0.04
RPL8BP29453 SSA3YBL075C 1950 nt14.76□□□□□ -0.05
RPL8BP29453 DAL1YIR027C 1383 nt14.75□□□□□ -0.05
RPL8BP29453 YFL021C-AYFL021C-A 855 nt14.74□□□□□ -0.05
RPL8BP29453 FPR4YLR449W 1179 nt14.72□□□□□ -0.05
RPL8BP29453 FIS1YIL065C 468 nt14.7□□□□□ -0.06
RPL8BP29453 RKM5YLR137W 1104 nt14.69□□□□□ -0.06
RPL8BP29453 YOL037CYOL037C 354 nt14.67□□□□□ -0.06
RPL8BP29453 YBL100CYBL100C 315 nt14.66□□□□□ -0.06
RPL8BP29453 LSM3YLR438C-A 270 nt14.65□□□□□ -0.06
RPL8BP29453 PHO4YFR034C 939 nt14.6□□□□□ -0.07
RPL8BP29453 TRM9YML014W 840 nt14.51□□□□□ -0.09
RPL8BP29453 FUN26YAL022C 1554 nt14.5□□□□□ -0.09
RPL8BP29453 Q0182Q0182 405 nt14.44□□□□□ -0.1
RPL8BP29453 tM(CAU)CtM(CAU)C 72 nt14.4□□□□□ -0.1
RPL8BP29453 IMT4tM(CAU)E 72 nt14.4□□□□□ -0.1
RPL8BP29453 IMT3tM(CAU)J3 72 nt14.4□□□□□ -0.1
RPL8BP29453 IMT1tM(CAU)O1 72 nt14.4□□□□□ -0.1
RPL8BP29453 IMT2tM(CAU)P 72 nt14.4□□□□□ -0.1
RPL8BP29453 CCT6YDR188W 1641 nt14.35□□□□□ -0.11
RPL8BP29453 YLR281CYLR281C 468 nt14.33□□□□□ -0.12
RPL8BP29453 YPS1YLR120C 1710 nt14.27□□□□□ -0.12
RPL8BP29453 WHI5YOR083W 888 nt14.26□□□□□ -0.13
RPL8BP29453 ALF1YNL148C 765 nt14.25□□□□□ -0.13
RPL8BP29453 PUS2YGL063W 1113 nt14.24□□□□□ -0.13
RPL8BP29453 SUF2tP(AGG)C 72 nt14.21□□□□□ -0.13
RPL8BP29453 SUF10tP(AGG)N 72 nt14.21□□□□□ -0.13
RPL8BP29453 YDR095CYDR095C 411 nt14.2□□□□□ -0.14
RPL8BP29453 YLR154C-GYLR154C-G 150 nt14.12□□□□□ -0.15
RPL8BP29453 YHR165W-AYHR165W-A 312 nt14.1□□□□□ -0.15
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms