Protein–RNA interactions for Protein: P38932

VPS45, Vacuolar protein sorting-associated protein 45, yeastyeast

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS45P38932 YML009W-BYML009W-B 477 nt23.51■■□□□ 1.35
VPS45P38932 NSR1YGR159C 1245 nt23.2■■□□□ 1.3
VPS45P38932 NOP1YDL014W 984 nt22.96■■□□□ 1.27
VPS45P38932 YKL036CYKL036C 393 nt21.38■■□□□ 1.01
VPS45P38932 MDJ1YFL016C 1536 nt20.37■□□□□ 0.85
VPS45P38932 Q0297Q0297 156 nt20.17■□□□□ 0.82
VPS45P38932 SRX1YKL086W 384 nt20.06■□□□□ 0.8
VPS45P38932 YJL027CYJL027C 417 nt19.99■□□□□ 0.79
VPS45P38932 SCS3YGL126W 1143 nt19.54■□□□□ 0.72
VPS45P38932 YCR051WYCR051W 669 nt19.04■□□□□ 0.64
VPS45P38932 YOL085CYOL085C 342 nt18.5■□□□□ 0.55
VPS45P38932 PKP1YIL042C 1185 nt18.18■□□□□ 0.5
VPS45P38932 DBP2YNL112W 1641 nt18.1■□□□□ 0.49
VPS45P38932 RPP1BYDL130W 321 nt18.09■□□□□ 0.49
VPS45P38932 TRN1tP(UGG)A 72 nt18■□□□□ 0.47
VPS45P38932 SUF9tP(UGG)F 72 nt18■□□□□ 0.47
VPS45P38932 SUF8tP(UGG)H 72 nt18■□□□□ 0.47
VPS45P38932 tP(UGG)LtP(UGG)L 72 nt18■□□□□ 0.47
VPS45P38932 SUF7tP(UGG)M 72 nt18■□□□□ 0.47
VPS45P38932 tP(UGG)N1tP(UGG)N1 72 nt18■□□□□ 0.47
VPS45P38932 tP(UGG)N2tP(UGG)N2 72 nt18■□□□□ 0.47
VPS45P38932 tP(UGG)O1tP(UGG)O1 72 nt18■□□□□ 0.47
VPS45P38932 SUF11tP(UGG)O2 72 nt18■□□□□ 0.47
VPS45P38932 CCC1YLR220W 969 nt17.82■□□□□ 0.44
VPS45P38932 SCJ1YMR214W 1134 nt17.6■□□□□ 0.41
VPS45P38932 ATS1YAL020C 1002 nt17.55■□□□□ 0.4
VPS45P38932 YBR190WYBR190W 312 nt17.34■□□□□ 0.37
VPS45P38932 PET122YER153C 765 nt17.25■□□□□ 0.35
VPS45P38932 SCR1SCR1 522 nt17.14■□□□□ 0.33
VPS45P38932 tP(UGG)O3tP(UGG)O3 72 nt17.1■□□□□ 0.33
VPS45P38932 RVS167YDR388W 1449 nt17.1■□□□□ 0.33
VPS45P38932 RTC3YHR087W 336 nt16.96■□□□□ 0.31
VPS45P38932 RRN5YLR141W 1092 nt16.78■□□□□ 0.28
VPS45P38932 YDJ1YNL064C 1230 nt16.56■□□□□ 0.24
VPS45P38932 SHR5YOL110W 714 nt16.55■□□□□ 0.24
VPS45P38932 RSB1YOR049C 1065 nt16.49■□□□□ 0.23
VPS45P38932 YER088W-BYER088W-B 147 nt16.45■□□□□ 0.22
VPS45P38932 PST2YDR032C 597 nt16.22■□□□□ 0.19
VPS45P38932 GAR1YHR089C 618 nt16.14■□□□□ 0.17
VPS45P38932 DEP1YAL013W 1218 nt16■□□□□ 0.15
VPS45P38932 URN1YPR152C 1398 nt15.95■□□□□ 0.14
VPS45P38932 RPN10YHR200W 807 nt15.79■□□□□ 0.12
VPS45P38932 YNL208WYNL208W 600 nt15.79■□□□□ 0.12
VPS45P38932 YKL097CYKL097C 411 nt15.68■□□□□ 0.1
VPS45P38932 OPI9YLR338W 858 nt15.68■□□□□ 0.1
VPS45P38932 TIR1YER011W 765 nt15.59■□□□□ 0.09
VPS45P38932 PUT4YOR348C 1884 nt15.55■□□□□ 0.08
VPS45P38932 SAH1YER043C 1350 nt15.51■□□□□ 0.07
VPS45P38932 SHU1YHL006C 453 nt15.5■□□□□ 0.07
VPS45P38932 SSA1YAL005C 1929 nt15.35■□□□□ 0.05
VPS45P38932 ARE1YCR048W 1833 nt15.33■□□□□ 0.04
VPS45P38932 YJR018WYJR018W 363 nt15.24■□□□□ 0.03
VPS45P38932 PUN1YLR414C 792 nt15.24■□□□□ 0.03
VPS45P38932 YAL037C-BYAL037C-B 975 nt15.19■□□□□ 0.02
VPS45P38932 YHR049C-AYHR049C-A 297 nt15.15■□□□□ 0.02
VPS45P38932 SRB2YHR041C 633 nt15.11■□□□□ 0.01
VPS45P38932 POA1YBR022W 534 nt15.09■□□□□ 0.01
VPS45P38932 YJR120WYJR120W 351 nt15.03■□□□□ -0
VPS45P38932 YOR139CYOR139C 393 nt15.01□□□□□ -0.01
VPS45P38932 RPP2BYDR382W 333 nt15□□□□□ -0.01
VPS45P38932 PTC2YER089C 1395 nt14.99□□□□□ -0.01
VPS45P38932 WWM1YFL010C 636 nt14.93□□□□□ -0.02
VPS45P38932 YGR021WYGR021W 873 nt14.93□□□□□ -0.02
VPS45P38932 HOM6YJR139C 1080 nt14.88□□□□□ -0.03
VPS45P38932 NPL3YDR432W 1245 nt14.85□□□□□ -0.03
VPS45P38932 BUD23YCR047C 828 nt14.82□□□□□ -0.04
VPS45P38932 MNP1YGL068W 585 nt14.82□□□□□ -0.04
VPS45P38932 NAB2YGL122C 1578 nt14.78□□□□□ -0.04
VPS45P38932 BDH2YAL061W 1254 nt14.73□□□□□ -0.05
VPS45P38932 BSC6YOL137W 1494 nt14.72□□□□□ -0.05
VPS45P38932 YFL021C-AYFL021C-A 855 nt14.71□□□□□ -0.05
VPS45P38932 YOL037CYOL037C 354 nt14.69□□□□□ -0.06
VPS45P38932 INM2YDR287W 879 nt14.68□□□□□ -0.06
VPS45P38932 SSA3YBL075C 1950 nt14.66□□□□□ -0.06
VPS45P38932 RKM5YLR137W 1104 nt14.66□□□□□ -0.06
VPS45P38932 DAL1YIR027C 1383 nt14.63□□□□□ -0.07
VPS45P38932 LSM3YLR438C-A 270 nt14.59□□□□□ -0.07
VPS45P38932 FPR4YLR449W 1179 nt14.59□□□□□ -0.07
VPS45P38932 FIS1YIL065C 468 nt14.58□□□□□ -0.08
VPS45P38932 YBL100CYBL100C 315 nt14.56□□□□□ -0.08
VPS45P38932 PHO4YFR034C 939 nt14.48□□□□□ -0.09
VPS45P38932 tM(CAU)CtM(CAU)C 72 nt14.42□□□□□ -0.1
VPS45P38932 IMT4tM(CAU)E 72 nt14.42□□□□□ -0.1
VPS45P38932 IMT3tM(CAU)J3 72 nt14.42□□□□□ -0.1
VPS45P38932 IMT1tM(CAU)O1 72 nt14.42□□□□□ -0.1
VPS45P38932 IMT2tM(CAU)P 72 nt14.42□□□□□ -0.1
VPS45P38932 TRM9YML014W 840 nt14.42□□□□□ -0.1
VPS45P38932 FUN26YAL022C 1554 nt14.39□□□□□ -0.11
VPS45P38932 YLR281CYLR281C 468 nt14.32□□□□□ -0.12
VPS45P38932 PUS2YGL063W 1113 nt14.26□□□□□ -0.13
VPS45P38932 CCT6YDR188W 1641 nt14.26□□□□□ -0.13
VPS45P38932 WHI5YOR083W 888 nt14.25□□□□□ -0.13
VPS45P38932 ALF1YNL148C 765 nt14.15□□□□□ -0.14
VPS45P38932 SUF2tP(AGG)C 72 nt14.12□□□□□ -0.15
VPS45P38932 SUF10tP(AGG)N 72 nt14.12□□□□□ -0.15
VPS45P38932 YPS1YLR120C 1710 nt14.12□□□□□ -0.15
VPS45P38932 YDR095CYDR095C 411 nt14.07□□□□□ -0.16
VPS45P38932 YLR154C-GYLR154C-G 150 nt14.07□□□□□ -0.16
VPS45P38932 DSK2YMR276W 1122 nt13.97□□□□□ -0.17
VPS45P38932 IMP2'YIL154C 1041 nt13.96□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms