Protein–RNA interactions for Protein: P16140

VMA2, V-type proton ATPase subunit B, yeastyeast

Known RBP Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA2P16140 YML009W-BYML009W-B 477 nt23.35■■□□□ 1.33
VMA2P16140 NOP1YDL014W 984 nt22.91■■□□□ 1.26
VMA2P16140 NSR1YGR159C 1245 nt22.85■■□□□ 1.25
VMA2P16140 YKL036CYKL036C 393 nt21.53■■□□□ 1.04
VMA2P16140 Q0297Q0297 156 nt20.18■□□□□ 0.82
VMA2P16140 YJL027CYJL027C 417 nt20.18■□□□□ 0.82
VMA2P16140 SRX1YKL086W 384 nt20■□□□□ 0.79
VMA2P16140 MDJ1YFL016C 1536 nt19.82■□□□□ 0.76
VMA2P16140 SCS3YGL126W 1143 nt19.79■□□□□ 0.76
VMA2P16140 YCR051WYCR051W 669 nt19.01■□□□□ 0.63
VMA2P16140 YOL085CYOL085C 342 nt18.63■□□□□ 0.57
VMA2P16140 PKP1YIL042C 1185 nt18.28■□□□□ 0.52
VMA2P16140 SCJ1YMR214W 1134 nt18.13■□□□□ 0.49
VMA2P16140 RPP1BYDL130W 321 nt18.11■□□□□ 0.49
VMA2P16140 ATS1YAL020C 1002 nt17.85■□□□□ 0.45
VMA2P16140 TRN1tP(UGG)A 72 nt17.81■□□□□ 0.44
VMA2P16140 SUF9tP(UGG)F 72 nt17.81■□□□□ 0.44
VMA2P16140 SUF8tP(UGG)H 72 nt17.81■□□□□ 0.44
VMA2P16140 tP(UGG)LtP(UGG)L 72 nt17.81■□□□□ 0.44
VMA2P16140 SUF7tP(UGG)M 72 nt17.81■□□□□ 0.44
VMA2P16140 tP(UGG)N1tP(UGG)N1 72 nt17.81■□□□□ 0.44
VMA2P16140 tP(UGG)N2tP(UGG)N2 72 nt17.81■□□□□ 0.44
VMA2P16140 tP(UGG)O1tP(UGG)O1 72 nt17.81■□□□□ 0.44
VMA2P16140 SUF11tP(UGG)O2 72 nt17.81■□□□□ 0.44
VMA2P16140 DBP2YNL112W 1641 nt17.72■□□□□ 0.43
VMA2P16140 CCC1YLR220W 969 nt17.64■□□□□ 0.41
VMA2P16140 PET122YER153C 765 nt17.23■□□□□ 0.35
VMA2P16140 SCR1SCR1 522 nt17.2■□□□□ 0.34
VMA2P16140 tP(UGG)O3tP(UGG)O3 72 nt17.02■□□□□ 0.32
VMA2P16140 YBR190WYBR190W 312 nt16.83■□□□□ 0.28
VMA2P16140 RVS167YDR388W 1449 nt16.8■□□□□ 0.28
VMA2P16140 RRN5YLR141W 1092 nt16.8■□□□□ 0.28
VMA2P16140 RSB1YOR049C 1065 nt16.58■□□□□ 0.24
VMA2P16140 YER088W-BYER088W-B 147 nt16.47■□□□□ 0.23
VMA2P16140 RTC3YHR087W 336 nt16.47■□□□□ 0.23
VMA2P16140 PST2YDR032C 597 nt16.45■□□□□ 0.22
VMA2P16140 YDJ1YNL064C 1230 nt16.45■□□□□ 0.22
VMA2P16140 SHR5YOL110W 714 nt16.31■□□□□ 0.2
VMA2P16140 YKL097CYKL097C 411 nt16.03■□□□□ 0.16
VMA2P16140 GAR1YHR089C 618 nt16.01■□□□□ 0.15
VMA2P16140 DEP1YAL013W 1218 nt15.69■□□□□ 0.1
VMA2P16140 SHU1YHL006C 453 nt15.67■□□□□ 0.1
VMA2P16140 URN1YPR152C 1398 nt15.58■□□□□ 0.08
VMA2P16140 YNL208WYNL208W 600 nt15.51■□□□□ 0.07
VMA2P16140 RPN10YHR200W 807 nt15.47■□□□□ 0.07
VMA2P16140 TIR1YER011W 765 nt15.46■□□□□ 0.07
VMA2P16140 YAL037C-BYAL037C-B 975 nt15.29■□□□□ 0.04
VMA2P16140 YOR139CYOR139C 393 nt15.29■□□□□ 0.04
VMA2P16140 OPI9YLR338W 858 nt15.27■□□□□ 0.04
VMA2P16140 SSA1YAL005C 1929 nt15.16■□□□□ 0.02
VMA2P16140 NPL3YDR432W 1245 nt15.09■□□□□ 0.01
VMA2P16140 SSA3YBL075C 1950 nt15.06■□□□□ 0
VMA2P16140 SAH1YER043C 1350 nt15.04■□□□□ -0
VMA2P16140 SRB2YHR041C 633 nt14.97□□□□□ -0.01
VMA2P16140 YGR021WYGR021W 873 nt14.92□□□□□ -0.02
VMA2P16140 PUT4YOR348C 1884 nt14.91□□□□□ -0.02
VMA2P16140 YJR018WYJR018W 363 nt14.9□□□□□ -0.02
VMA2P16140 HOM6YJR139C 1080 nt14.86□□□□□ -0.03
VMA2P16140 WWM1YFL010C 636 nt14.84□□□□□ -0.03
VMA2P16140 MNP1YGL068W 585 nt14.84□□□□□ -0.03
VMA2P16140 PUN1YLR414C 792 nt14.84□□□□□ -0.03
VMA2P16140 YOL037CYOL037C 354 nt14.8□□□□□ -0.04
VMA2P16140 ARE1YCR048W 1833 nt14.78□□□□□ -0.04
VMA2P16140 RPP2BYDR382W 333 nt14.74□□□□□ -0.05
VMA2P16140 YJR120WYJR120W 351 nt14.72□□□□□ -0.05
VMA2P16140 tM(CAU)CtM(CAU)C 72 nt14.69□□□□□ -0.06
VMA2P16140 IMT4tM(CAU)E 72 nt14.69□□□□□ -0.06
VMA2P16140 IMT3tM(CAU)J3 72 nt14.69□□□□□ -0.06
VMA2P16140 IMT1tM(CAU)O1 72 nt14.69□□□□□ -0.06
VMA2P16140 IMT2tM(CAU)P 72 nt14.69□□□□□ -0.06
VMA2P16140 RKM5YLR137W 1104 nt14.65□□□□□ -0.06
VMA2P16140 YFL021C-AYFL021C-A 855 nt14.61□□□□□ -0.07
VMA2P16140 YHR049C-AYHR049C-A 297 nt14.58□□□□□ -0.08
VMA2P16140 PTC2YER089C 1395 nt14.57□□□□□ -0.08
VMA2P16140 BDH2YAL061W 1254 nt14.5□□□□□ -0.09
VMA2P16140 POA1YBR022W 534 nt14.5□□□□□ -0.09
VMA2P16140 PUS2YGL063W 1113 nt14.42□□□□□ -0.1
VMA2P16140 YLR281CYLR281C 468 nt14.42□□□□□ -0.1
VMA2P16140 LSM3YLR438C-A 270 nt14.41□□□□□ -0.1
VMA2P16140 INM2YDR287W 879 nt14.33□□□□□ -0.12
VMA2P16140 NAB2YGL122C 1578 nt14.33□□□□□ -0.12
VMA2P16140 WHI5YOR083W 888 nt14.31□□□□□ -0.12
VMA2P16140 BUD23YCR047C 828 nt14.3□□□□□ -0.12
VMA2P16140 MOT3YMR070W 1473 nt14.28□□□□□ -0.12
VMA2P16140 YBL100CYBL100C 315 nt14.24□□□□□ -0.13
VMA2P16140 DAL1YIR027C 1383 nt14.22□□□□□ -0.13
VMA2P16140 FPR4YLR449W 1179 nt14.2□□□□□ -0.14
VMA2P16140 TRM9YML014W 840 nt14.17□□□□□ -0.14
VMA2P16140 FIS1YIL065C 468 nt14.12□□□□□ -0.15
VMA2P16140 FUN26YAL022C 1554 nt14.09□□□□□ -0.15
VMA2P16140 BSC6YOL137W 1494 nt14.08□□□□□ -0.16
VMA2P16140 PHO4YFR034C 939 nt14.07□□□□□ -0.16
VMA2P16140 DSK2YMR276W 1122 nt14.06□□□□□ -0.16
VMA2P16140 FMP45YDL222C 930 nt14.05□□□□□ -0.16
VMA2P16140 IMP2'YIL154C 1041 nt14.02□□□□□ -0.17
VMA2P16140 YPR011CYPR011C 981 nt14.02□□□□□ -0.17
VMA2P16140 CCT6YDR188W 1641 nt13.98□□□□□ -0.17
VMA2P16140 YLR154C-GYLR154C-G 150 nt13.98□□□□□ -0.17
VMA2P16140 YCH1YGR203W 447 nt13.95□□□□□ -0.18
VMA2P16140 YLR236CYLR236C 324 nt13.95□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms