Protein–RNA interactions for Protein: P20424

SRP54, Signal recognition particle subunit SRP54, yeastyeast

Known RBP Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRP54P20424 YML009W-BYML009W-B 477 nt23.5■■□□□ 1.35
SRP54P20424 NSR1YGR159C 1245 nt23.13■■□□□ 1.29
SRP54P20424 NOP1YDL014W 984 nt22.79■■□□□ 1.24
SRP54P20424 YKL036CYKL036C 393 nt21.21■□□□□ 0.99
SRP54P20424 MDJ1YFL016C 1536 nt20.56■□□□□ 0.88
SRP54P20424 Q0297Q0297 156 nt20.03■□□□□ 0.8
SRP54P20424 SRX1YKL086W 384 nt19.95■□□□□ 0.78
SRP54P20424 YJL027CYJL027C 417 nt19.85■□□□□ 0.77
SRP54P20424 SCS3YGL126W 1143 nt19.44■□□□□ 0.7
SRP54P20424 YCR051WYCR051W 669 nt19■□□□□ 0.63
SRP54P20424 YOL085CYOL085C 342 nt18.42■□□□□ 0.54
SRP54P20424 DBP2YNL112W 1641 nt18.23■□□□□ 0.51
SRP54P20424 PKP1YIL042C 1185 nt18.2■□□□□ 0.5
SRP54P20424 RPP1BYDL130W 321 nt18■□□□□ 0.47
SRP54P20424 TRN1tP(UGG)A 72 nt17.99■□□□□ 0.47
SRP54P20424 SUF9tP(UGG)F 72 nt17.99■□□□□ 0.47
SRP54P20424 SUF8tP(UGG)H 72 nt17.99■□□□□ 0.47
SRP54P20424 tP(UGG)LtP(UGG)L 72 nt17.99■□□□□ 0.47
SRP54P20424 SUF7tP(UGG)M 72 nt17.99■□□□□ 0.47
SRP54P20424 tP(UGG)N1tP(UGG)N1 72 nt17.99■□□□□ 0.47
SRP54P20424 tP(UGG)N2tP(UGG)N2 72 nt17.99■□□□□ 0.47
SRP54P20424 tP(UGG)O1tP(UGG)O1 72 nt17.99■□□□□ 0.47
SRP54P20424 SUF11tP(UGG)O2 72 nt17.99■□□□□ 0.47
SRP54P20424 CCC1YLR220W 969 nt17.88■□□□□ 0.45
SRP54P20424 ATS1YAL020C 1002 nt17.4■□□□□ 0.38
SRP54P20424 YBR190WYBR190W 312 nt17.37■□□□□ 0.37
SRP54P20424 PET122YER153C 765 nt17.25■□□□□ 0.35
SRP54P20424 SCJ1YMR214W 1134 nt17.24■□□□□ 0.35
SRP54P20424 tP(UGG)O3tP(UGG)O3 72 nt17.08■□□□□ 0.32
SRP54P20424 RTC3YHR087W 336 nt17.05■□□□□ 0.32
SRP54P20424 RVS167YDR388W 1449 nt17.04■□□□□ 0.32
SRP54P20424 SCR1SCR1 522 nt16.98■□□□□ 0.31
SRP54P20424 RRN5YLR141W 1092 nt16.74■□□□□ 0.27
SRP54P20424 SSA3YBL075C 1950 nt16.69■□□□□ 0.26
SRP54P20424 SHR5YOL110W 714 nt16.52■□□□□ 0.24
SRP54P20424 YDJ1YNL064C 1230 nt16.45■□□□□ 0.22
SRP54P20424 RSB1YOR049C 1065 nt16.43■□□□□ 0.22
SRP54P20424 YER088W-BYER088W-B 147 nt16.42■□□□□ 0.22
SRP54P20424 GAR1YHR089C 618 nt16.16■□□□□ 0.18
SRP54P20424 DEP1YAL013W 1218 nt16.13■□□□□ 0.17
SRP54P20424 PST2YDR032C 597 nt16.1■□□□□ 0.17
SRP54P20424 URN1YPR152C 1398 nt16.02■□□□□ 0.16
SRP54P20424 YNL208WYNL208W 600 nt15.76■□□□□ 0.11
SRP54P20424 OPI9YLR338W 858 nt15.73■□□□□ 0.11
SRP54P20424 PUT4YOR348C 1884 nt15.73■□□□□ 0.11
SRP54P20424 RPN10YHR200W 807 nt15.7■□□□□ 0.1
SRP54P20424 SAH1YER043C 1350 nt15.65■□□□□ 0.1
SRP54P20424 TIR1YER011W 765 nt15.58■□□□□ 0.08
SRP54P20424 YKL097CYKL097C 411 nt15.51■□□□□ 0.07
SRP54P20424 ARE1YCR048W 1833 nt15.51■□□□□ 0.07
SRP54P20424 SHU1YHL006C 453 nt15.46■□□□□ 0.07
SRP54P20424 SSA1YAL005C 1929 nt15.42■□□□□ 0.06
SRP54P20424 YHR049C-AYHR049C-A 297 nt15.31■□□□□ 0.04
SRP54P20424 SRB2YHR041C 633 nt15.29■□□□□ 0.04
SRP54P20424 POA1YBR022W 534 nt15.28■□□□□ 0.04
SRP54P20424 YJR018WYJR018W 363 nt15.27■□□□□ 0.04
SRP54P20424 YAL037C-BYAL037C-B 975 nt15.25■□□□□ 0.03
SRP54P20424 PUN1YLR414C 792 nt15.22■□□□□ 0.03
SRP54P20424 YJR120WYJR120W 351 nt15.16■□□□□ 0.02
SRP54P20424 PTC2YER089C 1395 nt15.1■□□□□ 0.01
SRP54P20424 BUD23YCR047C 828 nt14.98□□□□□ -0.01
SRP54P20424 WWM1YFL010C 636 nt14.97□□□□□ -0.01
SRP54P20424 YOR139CYOR139C 393 nt14.95□□□□□ -0.02
SRP54P20424 RPP2BYDR382W 333 nt14.94□□□□□ -0.02
SRP54P20424 BSC6YOL137W 1494 nt14.9□□□□□ -0.02
SRP54P20424 MNP1YGL068W 585 nt14.87□□□□□ -0.03
SRP54P20424 HOM6YJR139C 1080 nt14.84□□□□□ -0.03
SRP54P20424 NAB2YGL122C 1578 nt14.81□□□□□ -0.04
SRP54P20424 YGR021WYGR021W 873 nt14.81□□□□□ -0.04
SRP54P20424 NPL3YDR432W 1245 nt14.7□□□□□ -0.06
SRP54P20424 FIS1YIL065C 468 nt14.7□□□□□ -0.06
SRP54P20424 BDH2YAL061W 1254 nt14.7□□□□□ -0.06
SRP54P20424 FPR4YLR449W 1179 nt14.7□□□□□ -0.06
SRP54P20424 DAL1YIR027C 1383 nt14.67□□□□□ -0.06
SRP54P20424 INM2YDR287W 879 nt14.64□□□□□ -0.07
SRP54P20424 YFL021C-AYFL021C-A 855 nt14.63□□□□□ -0.07
SRP54P20424 RKM5YLR137W 1104 nt14.62□□□□□ -0.07
SRP54P20424 YBL100CYBL100C 315 nt14.6□□□□□ -0.07
SRP54P20424 PHO4YFR034C 939 nt14.57□□□□□ -0.08
SRP54P20424 YOL037CYOL037C 354 nt14.53□□□□□ -0.08
SRP54P20424 LSM3YLR438C-A 270 nt14.5□□□□□ -0.09
SRP54P20424 FUN26YAL022C 1554 nt14.43□□□□□ -0.1
SRP54P20424 TRM9YML014W 840 nt14.39□□□□□ -0.11
SRP54P20424 SSA4YER103W 1929 nt14.37□□□□□ -0.11
SRP54P20424 tM(CAU)CtM(CAU)C 72 nt14.33□□□□□ -0.12
SRP54P20424 IMT4tM(CAU)E 72 nt14.33□□□□□ -0.12
SRP54P20424 IMT3tM(CAU)J3 72 nt14.33□□□□□ -0.12
SRP54P20424 IMT1tM(CAU)O1 72 nt14.33□□□□□ -0.12
SRP54P20424 IMT2tM(CAU)P 72 nt14.33□□□□□ -0.12
SRP54P20424 CCT6YDR188W 1641 nt14.24□□□□□ -0.13
SRP54P20424 YLR281CYLR281C 468 nt14.24□□□□□ -0.13
SRP54P20424 YPS1YLR120C 1710 nt14.21□□□□□ -0.14
SRP54P20424 WHI5YOR083W 888 nt14.2□□□□□ -0.14
SRP54P20424 SPT5YML010W 3192 nt14.19□□□□□ -0.14
SRP54P20424 PUS2YGL063W 1113 nt14.19□□□□□ -0.14
SRP54P20424 ALF1YNL148C 765 nt14.15□□□□□ -0.14
SRP54P20424 YDR095CYDR095C 411 nt14.14□□□□□ -0.15
SRP54P20424 PAC11YDR488C 1602 nt14.08□□□□□ -0.15
SRP54P20424 YHR165W-AYHR165W-A 312 nt14.06□□□□□ -0.16
SRP54P20424 SUF2tP(AGG)C 72 nt14.05□□□□□ -0.16
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms