Protein–RNA interactions for Protein: Q99219

TY3A-I, Transposon Ty3-I Gag polyprotein, yeastyeast

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3A-IQ99219 YML009W-BYML009W-B 477 nt23.36■■□□□ 1.33
TY3A-IQ99219 NOP1YDL014W 984 nt22.97■■□□□ 1.27
TY3A-IQ99219 NSR1YGR159C 1245 nt22.7■■□□□ 1.22
TY3A-IQ99219 YKL036CYKL036C 393 nt21.68■■□□□ 1.06
TY3A-IQ99219 YJL027CYJL027C 417 nt20.36■□□□□ 0.85
TY3A-IQ99219 Q0297Q0297 156 nt20.21■□□□□ 0.83
TY3A-IQ99219 SRX1YKL086W 384 nt20.01■□□□□ 0.79
TY3A-IQ99219 SCS3YGL126W 1143 nt19.96■□□□□ 0.79
TY3A-IQ99219 MDJ1YFL016C 1536 nt19.59■□□□□ 0.73
TY3A-IQ99219 YCR051WYCR051W 669 nt19.08■□□□□ 0.64
TY3A-IQ99219 YOL085CYOL085C 342 nt18.72■□□□□ 0.59
TY3A-IQ99219 SCJ1YMR214W 1134 nt18.43■□□□□ 0.54
TY3A-IQ99219 PKP1YIL042C 1185 nt18.38■□□□□ 0.53
TY3A-IQ99219 RPP1BYDL130W 321 nt18.16■□□□□ 0.5
TY3A-IQ99219 ATS1YAL020C 1002 nt18.02■□□□□ 0.48
TY3A-IQ99219 TRN1tP(UGG)A 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 SUF9tP(UGG)F 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 SUF8tP(UGG)H 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 tP(UGG)LtP(UGG)L 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 SUF7tP(UGG)M 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 tP(UGG)N1tP(UGG)N1 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 tP(UGG)N2tP(UGG)N2 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 tP(UGG)O1tP(UGG)O1 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 SUF11tP(UGG)O2 72 nt17.73■□□□□ 0.43
TY3A-IQ99219 CCC1YLR220W 969 nt17.63■□□□□ 0.41
TY3A-IQ99219 DBP2YNL112W 1641 nt17.49■□□□□ 0.39
TY3A-IQ99219 SCR1SCR1 522 nt17.33■□□□□ 0.36
TY3A-IQ99219 PET122YER153C 765 nt17.26■□□□□ 0.35
TY3A-IQ99219 tP(UGG)O3tP(UGG)O3 72 nt16.99■□□□□ 0.31
TY3A-IQ99219 RRN5YLR141W 1092 nt16.84■□□□□ 0.29
TY3A-IQ99219 RTC3YHR087W 336 nt16.77■□□□□ 0.28
TY3A-IQ99219 RVS167YDR388W 1449 nt16.75■□□□□ 0.27
TY3A-IQ99219 RSB1YOR049C 1065 nt16.7■□□□□ 0.26
TY3A-IQ99219 YBR190WYBR190W 312 nt16.58■□□□□ 0.24
TY3A-IQ99219 PST2YDR032C 597 nt16.57■□□□□ 0.24
TY3A-IQ99219 YER088W-BYER088W-B 147 nt16.49■□□□□ 0.23
TY3A-IQ99219 YDJ1YNL064C 1230 nt16.43■□□□□ 0.22
TY3A-IQ99219 YKL097CYKL097C 411 nt16.29■□□□□ 0.2
TY3A-IQ99219 SHR5YOL110W 714 nt16.24■□□□□ 0.19
TY3A-IQ99219 GAR1YHR089C 618 nt16■□□□□ 0.15
TY3A-IQ99219 SHU1YHL006C 453 nt15.76■□□□□ 0.11
TY3A-IQ99219 DEP1YAL013W 1218 nt15.58■□□□□ 0.08
TY3A-IQ99219 YOR139CYOR139C 393 nt15.43■□□□□ 0.06
TY3A-IQ99219 URN1YPR152C 1398 nt15.42■□□□□ 0.06
TY3A-IQ99219 TIR1YER011W 765 nt15.42■□□□□ 0.06
TY3A-IQ99219 YNL208WYNL208W 600 nt15.42■□□□□ 0.06
TY3A-IQ99219 RPN10YHR200W 807 nt15.41■□□□□ 0.06
TY3A-IQ99219 YAL037C-BYAL037C-B 975 nt15.36■□□□□ 0.05
TY3A-IQ99219 NPL3YDR432W 1245 nt15.3■□□□□ 0.04
TY3A-IQ99219 OPI9YLR338W 858 nt15.06■□□□□ 0
TY3A-IQ99219 SSA1YAL005C 1929 nt15.05■□□□□ 0
TY3A-IQ99219 YGR021WYGR021W 873 nt14.96□□□□□ -0.01
TY3A-IQ99219 YOL037CYOL037C 354 nt14.92□□□□□ -0.02
TY3A-IQ99219 MNP1YGL068W 585 nt14.87□□□□□ -0.03
TY3A-IQ99219 HOM6YJR139C 1080 nt14.87□□□□□ -0.03
TY3A-IQ99219 SRB2YHR041C 633 nt14.84□□□□□ -0.03
TY3A-IQ99219 SAH1YER043C 1350 nt14.82□□□□□ -0.04
TY3A-IQ99219 WWM1YFL010C 636 nt14.81□□□□□ -0.04
TY3A-IQ99219 tM(CAU)CtM(CAU)C 72 nt14.81□□□□□ -0.04
TY3A-IQ99219 IMT4tM(CAU)E 72 nt14.81□□□□□ -0.04
TY3A-IQ99219 IMT3tM(CAU)J3 72 nt14.81□□□□□ -0.04
TY3A-IQ99219 IMT1tM(CAU)O1 72 nt14.81□□□□□ -0.04
TY3A-IQ99219 IMT2tM(CAU)P 72 nt14.81□□□□□ -0.04
TY3A-IQ99219 YJR018WYJR018W 363 nt14.76□□□□□ -0.05
TY3A-IQ99219 RPP2BYDR382W 333 nt14.69□□□□□ -0.06
TY3A-IQ99219 PUN1YLR414C 792 nt14.69□□□□□ -0.06
TY3A-IQ99219 RKM5YLR137W 1104 nt14.67□□□□□ -0.06
TY3A-IQ99219 YFL021C-AYFL021C-A 855 nt14.6□□□□□ -0.07
TY3A-IQ99219 PUS2YGL063W 1113 nt14.55□□□□□ -0.08
TY3A-IQ99219 PUT4YOR348C 1884 nt14.54□□□□□ -0.08
TY3A-IQ99219 YJR120WYJR120W 351 nt14.53□□□□□ -0.08
TY3A-IQ99219 YLR281CYLR281C 468 nt14.48□□□□□ -0.09
TY3A-IQ99219 MOT3YMR070W 1473 nt14.48□□□□□ -0.09
TY3A-IQ99219 ARE1YCR048W 1833 nt14.45□□□□□ -0.1
TY3A-IQ99219 BSC6YOL137W 1494 nt14.45□□□□□ -0.1
TY3A-IQ99219 BDH2YAL061W 1254 nt14.42□□□□□ -0.1
TY3A-IQ99219 SSA3YBL075C 1950 nt14.39□□□□□ -0.11
TY3A-IQ99219 PTC2YER089C 1395 nt14.37□□□□□ -0.11
TY3A-IQ99219 WHI5YOR083W 888 nt14.37□□□□□ -0.11
TY3A-IQ99219 LSM3YLR438C-A 270 nt14.35□□□□□ -0.11
TY3A-IQ99219 YHR049C-AYHR049C-A 297 nt14.33□□□□□ -0.12
TY3A-IQ99219 FMP45YDL222C 930 nt14.2□□□□□ -0.14
TY3A-IQ99219 POA1YBR022W 534 nt14.2□□□□□ -0.14
TY3A-IQ99219 INM2YDR287W 879 nt14.19□□□□□ -0.14
TY3A-IQ99219 DSK2YMR276W 1122 nt14.14□□□□□ -0.15
TY3A-IQ99219 MRPL8YJL063C 717 nt14.13□□□□□ -0.15
TY3A-IQ99219 YBL100CYBL100C 315 nt14.13□□□□□ -0.15
TY3A-IQ99219 NAB2YGL122C 1578 nt14.12□□□□□ -0.15
TY3A-IQ99219 IMP2'YIL154C 1041 nt14.11□□□□□ -0.15
TY3A-IQ99219 BUD23YCR047C 828 nt14.1□□□□□ -0.15
TY3A-IQ99219 TRM9YML014W 840 nt14.1□□□□□ -0.15
TY3A-IQ99219 YCH1YGR203W 447 nt14.08□□□□□ -0.16
TY3A-IQ99219 FPR4YLR449W 1179 nt14.08□□□□□ -0.16
TY3A-IQ99219 DAL1YIR027C 1383 nt14.04□□□□□ -0.16
TY3A-IQ99219 YPR011CYPR011C 981 nt14.03□□□□□ -0.16
TY3A-IQ99219 YLR236CYLR236C 324 nt13.99□□□□□ -0.17
TY3A-IQ99219 YLR154C-GYLR154C-G 150 nt13.97□□□□□ -0.17
TY3A-IQ99219 ADO1YJR105W 1023 nt13.96□□□□□ -0.17
TY3A-IQ99219 FUN26YAL022C 1554 nt13.96□□□□□ -0.18
TY3A-IQ99219 FIS1YIL065C 468 nt13.9□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms