Protein–RNA interactions for Protein: P53281

LSB1, LAS seventeen-binding protein 1, yeastyeast

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSB1P53281 YML009W-BYML009W-B 477 nt23.4■■□□□ 1.34
LSB1P53281 NSR1YGR159C 1245 nt23.1■■□□□ 1.29
LSB1P53281 NOP1YDL014W 984 nt22.89■■□□□ 1.25
LSB1P53281 YKL036CYKL036C 393 nt21.27■■□□□ 1
LSB1P53281 MDJ1YFL016C 1536 nt20.26■□□□□ 0.83
LSB1P53281 Q0297Q0297 156 nt20.05■□□□□ 0.8
LSB1P53281 SRX1YKL086W 384 nt19.96■□□□□ 0.79
LSB1P53281 YJL027CYJL027C 417 nt19.9■□□□□ 0.78
LSB1P53281 SCS3YGL126W 1143 nt19.42■□□□□ 0.7
LSB1P53281 YCR051WYCR051W 669 nt18.96■□□□□ 0.63
LSB1P53281 YOL085CYOL085C 342 nt18.39■□□□□ 0.53
LSB1P53281 PKP1YIL042C 1185 nt18.07■□□□□ 0.48
LSB1P53281 RPP1BYDL130W 321 nt18■□□□□ 0.47
LSB1P53281 DBP2YNL112W 1641 nt17.98■□□□□ 0.47
LSB1P53281 TRN1tP(UGG)A 72 nt17.9■□□□□ 0.46
LSB1P53281 SUF9tP(UGG)F 72 nt17.9■□□□□ 0.46
LSB1P53281 SUF8tP(UGG)H 72 nt17.9■□□□□ 0.46
LSB1P53281 tP(UGG)LtP(UGG)L 72 nt17.9■□□□□ 0.46
LSB1P53281 SUF7tP(UGG)M 72 nt17.9■□□□□ 0.46
LSB1P53281 tP(UGG)N1tP(UGG)N1 72 nt17.9■□□□□ 0.46
LSB1P53281 tP(UGG)N2tP(UGG)N2 72 nt17.9■□□□□ 0.46
LSB1P53281 tP(UGG)O1tP(UGG)O1 72 nt17.9■□□□□ 0.46
LSB1P53281 SUF11tP(UGG)O2 72 nt17.9■□□□□ 0.46
LSB1P53281 CCC1YLR220W 969 nt17.74■□□□□ 0.43
LSB1P53281 SCJ1YMR214W 1134 nt17.51■□□□□ 0.39
LSB1P53281 ATS1YAL020C 1002 nt17.44■□□□□ 0.38
LSB1P53281 YBR190WYBR190W 312 nt17.27■□□□□ 0.36
LSB1P53281 PET122YER153C 765 nt17.14■□□□□ 0.33
LSB1P53281 SCR1SCR1 522 nt17.09■□□□□ 0.33
LSB1P53281 RVS167YDR388W 1449 nt17.07■□□□□ 0.32
LSB1P53281 tP(UGG)O3tP(UGG)O3 72 nt17.01■□□□□ 0.31
LSB1P53281 RTC3YHR087W 336 nt16.92■□□□□ 0.3
LSB1P53281 RRN5YLR141W 1092 nt16.67■□□□□ 0.26
LSB1P53281 SHR5YOL110W 714 nt16.49■□□□□ 0.23
LSB1P53281 YDJ1YNL064C 1230 nt16.46■□□□□ 0.23
LSB1P53281 RSB1YOR049C 1065 nt16.42■□□□□ 0.22
LSB1P53281 YER088W-BYER088W-B 147 nt16.34■□□□□ 0.21
LSB1P53281 PST2YDR032C 597 nt16.1■□□□□ 0.17
LSB1P53281 GAR1YHR089C 618 nt16.06■□□□□ 0.16
LSB1P53281 DEP1YAL013W 1218 nt15.92■□□□□ 0.14
LSB1P53281 URN1YPR152C 1398 nt15.88■□□□□ 0.13
LSB1P53281 RPN10YHR200W 807 nt15.76■□□□□ 0.11
LSB1P53281 YNL208WYNL208W 600 nt15.74■□□□□ 0.11
LSB1P53281 YKL097CYKL097C 411 nt15.61■□□□□ 0.09
LSB1P53281 OPI9YLR338W 858 nt15.61■□□□□ 0.09
LSB1P53281 TIR1YER011W 765 nt15.52■□□□□ 0.08
LSB1P53281 PUT4YOR348C 1884 nt15.47■□□□□ 0.07
LSB1P53281 SAH1YER043C 1350 nt15.45■□□□□ 0.06
LSB1P53281 SHU1YHL006C 453 nt15.39■□□□□ 0.05
LSB1P53281 ARE1YCR048W 1833 nt15.26■□□□□ 0.03
LSB1P53281 SSA1YAL005C 1929 nt15.25■□□□□ 0.03
LSB1P53281 PUN1YLR414C 792 nt15.19■□□□□ 0.02
LSB1P53281 YJR018WYJR018W 363 nt15.18■□□□□ 0.02
LSB1P53281 YHR049C-AYHR049C-A 297 nt15.08■□□□□ 0
LSB1P53281 YAL037C-BYAL037C-B 975 nt15.08■□□□□ 0
LSB1P53281 POA1YBR022W 534 nt15.03■□□□□ -0
LSB1P53281 RPP2BYDR382W 333 nt14.98□□□□□ -0.01
LSB1P53281 SRB2YHR041C 633 nt14.97□□□□□ -0.01
LSB1P53281 PTC2YER089C 1395 nt14.94□□□□□ -0.02
LSB1P53281 YJR120WYJR120W 351 nt14.9□□□□□ -0.02
LSB1P53281 YGR021WYGR021W 873 nt14.88□□□□□ -0.03
LSB1P53281 YOR139CYOR139C 393 nt14.88□□□□□ -0.03
LSB1P53281 WWM1YFL010C 636 nt14.84□□□□□ -0.03
LSB1P53281 NPL3YDR432W 1245 nt14.79□□□□□ -0.04
LSB1P53281 HOM6YJR139C 1080 nt14.79□□□□□ -0.04
LSB1P53281 BUD23YCR047C 828 nt14.78□□□□□ -0.04
LSB1P53281 NAB2YGL122C 1578 nt14.74□□□□□ -0.05
LSB1P53281 MNP1YGL068W 585 nt14.72□□□□□ -0.05
LSB1P53281 BDH2YAL061W 1254 nt14.67□□□□□ -0.06
LSB1P53281 BSC6YOL137W 1494 nt14.65□□□□□ -0.06
LSB1P53281 INM2YDR287W 879 nt14.64□□□□□ -0.07
LSB1P53281 YFL021C-AYFL021C-A 855 nt14.64□□□□□ -0.07
LSB1P53281 YOL037CYOL037C 354 nt14.62□□□□□ -0.07
LSB1P53281 RKM5YLR137W 1104 nt14.58□□□□□ -0.08
LSB1P53281 DAL1YIR027C 1383 nt14.58□□□□□ -0.08
LSB1P53281 FPR4YLR449W 1179 nt14.56□□□□□ -0.08
LSB1P53281 LSM3YLR438C-A 270 nt14.54□□□□□ -0.08
LSB1P53281 SSA3YBL075C 1950 nt14.52□□□□□ -0.09
LSB1P53281 YBL100CYBL100C 315 nt14.51□□□□□ -0.09
LSB1P53281 FIS1YIL065C 468 nt14.5□□□□□ -0.09
LSB1P53281 PHO4YFR034C 939 nt14.42□□□□□ -0.1
LSB1P53281 TRM9YML014W 840 nt14.38□□□□□ -0.11
LSB1P53281 FUN26YAL022C 1554 nt14.34□□□□□ -0.11
LSB1P53281 tM(CAU)CtM(CAU)C 72 nt14.31□□□□□ -0.12
LSB1P53281 IMT4tM(CAU)E 72 nt14.31□□□□□ -0.12
LSB1P53281 IMT3tM(CAU)J3 72 nt14.31□□□□□ -0.12
LSB1P53281 IMT1tM(CAU)O1 72 nt14.31□□□□□ -0.12
LSB1P53281 IMT2tM(CAU)P 72 nt14.31□□□□□ -0.12
LSB1P53281 YLR281CYLR281C 468 nt14.24□□□□□ -0.13
LSB1P53281 CCT6YDR188W 1641 nt14.19□□□□□ -0.14
LSB1P53281 PUS2YGL063W 1113 nt14.17□□□□□ -0.14
LSB1P53281 WHI5YOR083W 888 nt14.16□□□□□ -0.14
LSB1P53281 ALF1YNL148C 765 nt14.13□□□□□ -0.15
LSB1P53281 SUF2tP(AGG)C 72 nt14.11□□□□□ -0.15
LSB1P53281 SUF10tP(AGG)N 72 nt14.11□□□□□ -0.15
LSB1P53281 YPS1YLR120C 1710 nt14.07□□□□□ -0.16
LSB1P53281 YDR095CYDR095C 411 nt14.01□□□□□ -0.17
LSB1P53281 YLR154C-GYLR154C-G 150 nt14□□□□□ -0.17
LSB1P53281 YHR165W-AYHR165W-A 312 nt13.92□□□□□ -0.18
LSB1P53281 IMP2'YIL154C 1041 nt13.92□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms