Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 YML009W-BYML009W-B 477 nt23.35■■□□□ 1.33
HCA4P20448 NSR1YGR159C 1245 nt23.3■■□□□ 1.32
HCA4P20448 NOP1YDL014W 984 nt22.66■■□□□ 1.22
HCA4P20448 YKL036CYKL036C 393 nt20.9■□□□□ 0.94
HCA4P20448 MDJ1YFL016C 1536 nt20.73■□□□□ 0.91
HCA4P20448 Q0297Q0297 156 nt19.91■□□□□ 0.78
HCA4P20448 SRX1YKL086W 384 nt19.86■□□□□ 0.77
HCA4P20448 YJL027CYJL027C 417 nt19.47■□□□□ 0.71
HCA4P20448 SCS3YGL126W 1143 nt19.03■□□□□ 0.64
HCA4P20448 YCR051WYCR051W 669 nt18.78■□□□□ 0.6
HCA4P20448 DBP2YNL112W 1641 nt18.4■□□□□ 0.54
HCA4P20448 YOL085CYOL085C 342 nt18.15■□□□□ 0.5
HCA4P20448 TRN1tP(UGG)A 72 nt18.01■□□□□ 0.47
HCA4P20448 SUF9tP(UGG)F 72 nt18.01■□□□□ 0.47
HCA4P20448 SUF8tP(UGG)H 72 nt18.01■□□□□ 0.47
HCA4P20448 tP(UGG)LtP(UGG)L 72 nt18.01■□□□□ 0.47
HCA4P20448 SUF7tP(UGG)M 72 nt18.01■□□□□ 0.47
HCA4P20448 tP(UGG)N1tP(UGG)N1 72 nt18.01■□□□□ 0.47
HCA4P20448 tP(UGG)N2tP(UGG)N2 72 nt18.01■□□□□ 0.47
HCA4P20448 tP(UGG)O1tP(UGG)O1 72 nt18.01■□□□□ 0.47
HCA4P20448 SUF11tP(UGG)O2 72 nt18.01■□□□□ 0.47
HCA4P20448 RPP1BYDL130W 321 nt17.84■□□□□ 0.45
HCA4P20448 PKP1YIL042C 1185 nt17.84■□□□□ 0.45
HCA4P20448 CCC1YLR220W 969 nt17.75■□□□□ 0.43
HCA4P20448 YBR190WYBR190W 312 nt17.69■□□□□ 0.42
HCA4P20448 RTC3YHR087W 336 nt17.22■□□□□ 0.35
HCA4P20448 SCJ1YMR214W 1134 nt17.16■□□□□ 0.34
HCA4P20448 RVS167YDR388W 1449 nt17.13■□□□□ 0.33
HCA4P20448 PET122YER153C 765 nt17.06■□□□□ 0.32
HCA4P20448 tP(UGG)O3tP(UGG)O3 72 nt17■□□□□ 0.31
HCA4P20448 ATS1YAL020C 1002 nt17■□□□□ 0.31
HCA4P20448 SCR1SCR1 522 nt16.78■□□□□ 0.28
HCA4P20448 SHR5YOL110W 714 nt16.59■□□□□ 0.25
HCA4P20448 RRN5YLR141W 1092 nt16.55■□□□□ 0.24
HCA4P20448 YDJ1YNL064C 1230 nt16.46■□□□□ 0.23
HCA4P20448 YER088W-BYER088W-B 147 nt16.24■□□□□ 0.19
HCA4P20448 URN1YPR152C 1398 nt16.15■□□□□ 0.18
HCA4P20448 PUT4YOR348C 1884 nt16.15■□□□□ 0.18
HCA4P20448 RSB1YOR049C 1065 nt16.14■□□□□ 0.17
HCA4P20448 DEP1YAL013W 1218 nt16.12■□□□□ 0.17
HCA4P20448 GAR1YHR089C 618 nt16.05■□□□□ 0.16
HCA4P20448 OPI9YLR338W 858 nt15.96■□□□□ 0.15
HCA4P20448 SAH1YER043C 1350 nt15.87■□□□□ 0.13
HCA4P20448 YNL208WYNL208W 600 nt15.86■□□□□ 0.13
HCA4P20448 ARE1YCR048W 1833 nt15.84■□□□□ 0.13
HCA4P20448 RPN10YHR200W 807 nt15.84■□□□□ 0.13
HCA4P20448 PST2YDR032C 597 nt15.8■□□□□ 0.12
HCA4P20448 YHR049C-AYHR049C-A 297 nt15.58■□□□□ 0.08
HCA4P20448 POA1YBR022W 534 nt15.58■□□□□ 0.08
HCA4P20448 TIR1YER011W 765 nt15.54■□□□□ 0.08
HCA4P20448 PUN1YLR414C 792 nt15.45■□□□□ 0.06
HCA4P20448 YJR018WYJR018W 363 nt15.41■□□□□ 0.06
HCA4P20448 SSA1YAL005C 1929 nt15.41■□□□□ 0.06
HCA4P20448 PTC2YER089C 1395 nt15.28■□□□□ 0.04
HCA4P20448 BSC6YOL137W 1494 nt15.27■□□□□ 0.04
HCA4P20448 YJR120WYJR120W 351 nt15.27■□□□□ 0.04
HCA4P20448 SSA3YBL075C 1950 nt15.2■□□□□ 0.02
HCA4P20448 SRB2YHR041C 633 nt15.2■□□□□ 0.02
HCA4P20448 BUD23YCR047C 828 nt15.17■□□□□ 0.02
HCA4P20448 SHU1YHL006C 453 nt15.15■□□□□ 0.02
HCA4P20448 NAB2YGL122C 1578 nt15.09■□□□□ 0.01
HCA4P20448 YKL097CYKL097C 411 nt15.06■□□□□ 0
HCA4P20448 RPP2BYDR382W 333 nt15.02■□□□□ -0
HCA4P20448 FIS1YIL065C 468 nt14.94□□□□□ -0.02
HCA4P20448 YAL037C-BYAL037C-B 975 nt14.91□□□□□ -0.02
HCA4P20448 DAL1YIR027C 1383 nt14.89□□□□□ -0.03
HCA4P20448 WWM1YFL010C 636 nt14.86□□□□□ -0.03
HCA4P20448 INM2YDR287W 879 nt14.85□□□□□ -0.03
HCA4P20448 BDH2YAL061W 1254 nt14.79□□□□□ -0.04
HCA4P20448 FPR4YLR449W 1179 nt14.78□□□□□ -0.04
HCA4P20448 PHO4YFR034C 939 nt14.76□□□□□ -0.05
HCA4P20448 SPT5YML010W 3192 nt14.74□□□□□ -0.05
HCA4P20448 YGR021WYGR021W 873 nt14.73□□□□□ -0.05
HCA4P20448 HOM6YJR139C 1080 nt14.73□□□□□ -0.05
HCA4P20448 YBL100CYBL100C 315 nt14.7□□□□□ -0.06
HCA4P20448 MNP1YGL068W 585 nt14.63□□□□□ -0.07
HCA4P20448 YFL021C-AYFL021C-A 855 nt14.61□□□□□ -0.07
HCA4P20448 LSM3YLR438C-A 270 nt14.59□□□□□ -0.07
HCA4P20448 YOR139CYOR139C 393 nt14.56□□□□□ -0.08
HCA4P20448 FUN26YAL022C 1554 nt14.56□□□□□ -0.08
HCA4P20448 YPS1YLR120C 1710 nt14.52□□□□□ -0.09
HCA4P20448 RKM5YLR137W 1104 nt14.49□□□□□ -0.09
HCA4P20448 TRM9YML014W 840 nt14.47□□□□□ -0.09
HCA4P20448 YDR095CYDR095C 411 nt14.42□□□□□ -0.1
HCA4P20448 CCT6YDR188W 1641 nt14.39□□□□□ -0.11
HCA4P20448 MEP2YNL142W 1500 nt14.36□□□□□ -0.11
HCA4P20448 YOL037CYOL037C 354 nt14.34□□□□□ -0.11
HCA4P20448 NPL3YDR432W 1245 nt14.33□□□□□ -0.12
HCA4P20448 YHR165W-AYHR165W-A 312 nt14.27□□□□□ -0.13
HCA4P20448 ALF1YNL148C 765 nt14.27□□□□□ -0.13
HCA4P20448 SUF2tP(AGG)C 72 nt14.19□□□□□ -0.14
HCA4P20448 SUF10tP(AGG)N 72 nt14.19□□□□□ -0.14
HCA4P20448 SIS1YNL007C 1059 nt14.17□□□□□ -0.14
HCA4P20448 DCW1YKL046C 1350 nt14.15□□□□□ -0.14
HCA4P20448 PTP1YDL230W 1008 nt14.15□□□□□ -0.14
HCA4P20448 RPP2AYOL039W 321 nt14.12□□□□□ -0.15
HCA4P20448 SSA4YER103W 1929 nt14.1□□□□□ -0.15
HCA4P20448 YLR281CYLR281C 468 nt14.06□□□□□ -0.16
HCA4P20448 CAC2YML102W 1407 nt14.01□□□□□ -0.17
HCA4P20448 WHI5YOR083W 888 nt14□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms