RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED1	YDR077W	ELM1	P32801	640 aa		10.86	□□□□□ -0.67
SED1	YDR077W	FAR11	P53917	953 aa		10.86	□□□□□ -0.67
SED1	YDR077W	PCL8	Q08966	492 aa		10.86	□□□□□ -0.67
SED1	YDR077W	YOR111W	Q99210	232 aa		10.86	□□□□□ -0.67
SED1	YDR077W	SWI4	P25302	1093 aa	Known RBP	10.85	□□□□□ -0.67
SED1	YDR077W	ASF1	P32447	279 aa		10.85	□□□□□ -0.67
SED1	YDR077W	YJL171C	P46992	396 aa		10.85	□□□□□ -0.67
SED1	YDR077W	RPT6	Q01939	405 aa	Known RBP	10.85	□□□□□ -0.67
SED1	YDR077W	GDE1	Q02979	1223 aa		10.85	□□□□□ -0.67
SED1	YDR077W	MYO5	Q04439	1219 aa	Known RBP	10.85	□□□□□ -0.67
SED1	YDR077W	APC11	Q12157	165 aa		10.85	□□□□□ -0.67
SED1	YDR077W	CLF1	Q12309	687 aa	Predicted RBP	10.85	□□□□□ -0.67
SED1	YDR077W	FRS2	P15625	503 aa	Known RBP	10.84	□□□□□ -0.67
SED1	YDR077W	MBR1	P23493	339 aa		10.84	□□□□□ -0.67
SED1	YDR077W	STV1	P37296	890 aa		10.84	□□□□□ -0.67
SED1	YDR077W	PES4	P39684	611 aa		10.84	□□□□□ -0.67
SED1	YDR077W	TIM50	Q02776	476 aa		10.84	□□□□□ -0.67
SED1	YDR077W	SRM1	P21827	482 aa		10.83	□□□□□ -0.68
SED1	YDR077W	PRE8	P23639	250 aa		10.83	□□□□□ -0.68
SED1	YDR077W	KNS1	P32350	737 aa	Predicted RBP	10.83	□□□□□ -0.68
SED1	YDR077W	DID4	P36108	232 aa		10.83	□□□□□ -0.68
SED1	YDR077W	RXT2	P38255	430 aa		10.83	□□□□□ -0.68
SED1	YDR077W	VPS4	P52917	437 aa		10.83	□□□□□ -0.68
SED1	YDR077W	ADP1	P25371	1049 aa		10.82	□□□□□ -0.68
SED1	YDR077W	RPL8B	P29453	256 aa	Known RBP	10.82	□□□□□ -0.68
SED1	YDR077W	SLI15	P38283	698 aa		10.82	□□□□□ -0.68
SED1	YDR077W	UTP7	P40055	554 aa	Known RBP	10.82	□□□□□ -0.68
SED1	YDR077W	SNU71	P53207	620 aa	Known RBP	10.82	□□□□□ -0.68
SED1	YDR077W	KRE33	P53914	1056 aa	Known RBP	10.82	□□□□□ -0.68
SED1	YDR077W	CIT1	P00890	479 aa		10.81	□□□□□ -0.68
SED1	YDR077W	RGP1	P16664	663 aa		10.81	□□□□□ -0.68
SED1	YDR077W	GLC3	P32775	704 aa		10.81	□□□□□ -0.68
SED1	YDR077W	RKM3	P38222	552 aa		10.81	□□□□□ -0.68
SED1	YDR077W	MTC3	P53077	123 aa		10.81	□□□□□ -0.68
SED1	YDR077W	NAF1	P53919	492 aa	Known RBP	10.81	□□□□□ -0.68
SED1	YDR077W	YDR341C	Q05506	607 aa	Known RBP	10.81	□□□□□ -0.68
SED1	YDR077W	YDL124W	Q07551	312 aa	Known RBP	10.81	□□□□□ -0.68
SED1	YDR077W	GET3	Q12154	354 aa	Known RBP	10.81	□□□□□ -0.68
SED1	YDR077W	DDP1	Q99321	188 aa	Known RBP	10.81	□□□□□ -0.68
SED1	YDR077W	HXK1	P04806	485 aa	Known RBP	10.8	□□□□□ -0.68
SED1	YDR077W	PMA1	P05030	918 aa	Known RBP	10.8	□□□□□ -0.68
SED1	YDR077W	RFT1	P38206	574 aa	Predicted RBP	10.8	□□□□□ -0.68
SED1	YDR077W	CST26	P38226	397 aa		10.8	□□□□□ -0.68
SED1	YDR077W	FET4	P40988	552 aa		10.8	□□□□□ -0.68
SED1	YDR077W	RSC1	P53236	928 aa		10.8	□□□□□ -0.68
SED1	YDR077W	VPS30	Q02948	557 aa		10.8	□□□□□ -0.68
SED1	YDR077W	LCD1	Q04377	747 aa		10.8	□□□□□ -0.68
SED1	YDR077W	SKG3	Q06315	1026 aa		10.8	□□□□□ -0.68
SED1	YDR077W	CEX1	Q12453	761 aa		10.8	□□□□□ -0.68
SED1	YDR077W	CDC6	P09119	513 aa		10.79	□□□□□ -0.68
SED1	YDR077W	KIN1	P13185	1064 aa		10.79	□□□□□ -0.68
SED1	YDR077W	HPR1	P17629	752 aa	Known RBP	10.79	□□□□□ -0.68
SED1	YDR077W	YBL028C	P38202	106 aa		10.79	□□□□□ -0.68
SED1	YDR077W	TOM71	P38825	639 aa	Known RBP	10.79	□□□□□ -0.68
SED1	YDR077W	PCI8	P40512	444 aa		10.79	□□□□□ -0.68
SED1	YDR077W	FOL1	P53848	824 aa		10.79	□□□□□ -0.68
SED1	YDR077W	DCS2	Q12123	353 aa		10.79	□□□□□ -0.68
SED1	YDR077W	NBL1	Q3E7Y6	73 aa		10.79	□□□□□ -0.68
SED1	YDR077W	MET6	P05694	767 aa	Known RBP	10.78	□□□□□ -0.68
SED1	YDR077W	SSA1	P10591	642 aa	Known RBP	10.78	□□□□□ -0.68
SED1	YDR077W	GAP1	P19145	602 aa	Predicted RBP	10.78	□□□□□ -0.68
SED1	YDR077W	SEC20	P28791	383 aa		10.78	□□□□□ -0.68
SED1	YDR077W	CHS3	P29465	1165 aa		10.78	□□□□□ -0.68
SED1	YDR077W	YGR117C	P53270	476 aa		10.78	□□□□□ -0.68
SED1	YDR077W	CSC1	Q06538	782 aa		10.78	□□□□□ -0.68
SED1	YDR077W	AIM7	Q12156	149 aa		10.78	□□□□□ -0.68
SED1	YDR077W	ACE2	P21192	770 aa		10.77	□□□□□ -0.69
SED1	YDR077W	YKT6	P36015	200 aa	Known RBP	10.77	□□□□□ -0.69
SED1	YDR077W	NPR3	P38742	1146 aa		10.77	□□□□□ -0.69
SED1	YDR077W	YPT11	P48559	417 aa		10.77	□□□□□ -0.69
SED1	YDR077W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.77	□□□□□ -0.69	not detected
SED1	YDR077W	MYO1	P08964	1928 aa		10.77	□□□□□ -0.69
SED1	YDR077W	CBP1	P07252	654 aa		10.76	□□□□□ -0.69
SED1	YDR077W	NUC1	P08466	329 aa		10.76	□□□□□ -0.69
SED1	YDR077W	TAF13	P11747	167 aa		10.76	□□□□□ -0.69
SED1	YDR077W	MAK11	P20484	414 aa	Known RBP	10.76	□□□□□ -0.69
SED1	YDR077W	VPS1	P21576	704 aa	Known RBP	10.76	□□□□□ -0.69
SED1	YDR077W	RAD53	P22216	821 aa		10.76	□□□□□ -0.69
SED1	YDR077W	RTG2	P32608	588 aa	Known RBP	10.76	□□□□□ -0.69
SED1	YDR077W	SAS3	P34218	831 aa		10.76	□□□□□ -0.69
SED1	YDR077W	VPS45	P38932	577 aa		10.76	□□□□□ -0.69
SED1	YDR077W	YER130C	P39959	443 aa		10.76	□□□□□ -0.69
SED1	YDR077W	YGL138C	P53122	345 aa		10.76	□□□□□ -0.69
SED1	YDR077W	SGD1	Q06132	899 aa		10.76	□□□□□ -0.69
SED1	YDR077W	DSE3	Q08729	430 aa		10.76	□□□□□ -0.69
SED1	YDR077W	TIP41	Q12199	356 aa		10.76	□□□□□ -0.69
SED1	YDR077W	YLR278C	Q05854	1341 aa		10.76	□□□□□ -0.69
SED1	YDR077W	TUS1	Q06412	1307 aa		10.76	□□□□□ -0.69
SED1	YDR077W	THS1	P04801	734 aa	Known RBP	10.75	□□□□□ -0.69
SED1	YDR077W	GPA1	P08539	472 aa		10.75	□□□□□ -0.69
SED1	YDR077W	SRP54	P20424	541 aa	Known RBP	10.75	□□□□□ -0.69
SED1	YDR077W	MAP2	P38174	421 aa	Known RBP	10.75	□□□□□ -0.69
SED1	YDR077W	NIT1	P40447	199 aa		10.75	□□□□□ -0.69
SED1	YDR077W	EMP47	P43555	445 aa		10.75	□□□□□ -0.69
SED1	YDR077W	MDM1	Q01846	1127 aa		10.75	□□□□□ -0.69
SED1	YDR077W	YPR148C	Q06523	435 aa		10.75	□□□□□ -0.69
SED1	YDR077W	TRS33	Q99394	268 aa		10.75	□□□□□ -0.69
SED1	YDR077W	TUB2	P02557	457 aa	Known RBP	10.74	□□□□□ -0.69
SED1	YDR077W	URA1	P28272	314 aa	Predicted RBP	10.74	□□□□□ -0.69
SED1	YDR077W	RTC4	P53850	401 aa		10.74	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms