Protein–RNA interactions for Protein: P23639

PRE8, Proteasome subunit alpha type-2, yeastyeast

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE8P23639 YML009W-BYML009W-B 477 nt23.87■■□□□ 1.41
PRE8P23639 NSR1YGR159C 1245 nt23.44■■□□□ 1.34
PRE8P23639 NOP1YDL014W 984 nt23.29■■□□□ 1.32
PRE8P23639 YKL036CYKL036C 393 nt21.76■■□□□ 1.07
PRE8P23639 MDJ1YFL016C 1536 nt20.58■□□□□ 0.89
PRE8P23639 Q0297Q0297 156 nt20.47■□□□□ 0.87
PRE8P23639 YJL027CYJL027C 417 nt20.39■□□□□ 0.85
PRE8P23639 SRX1YKL086W 384 nt20.35■□□□□ 0.85
PRE8P23639 SCS3YGL126W 1143 nt19.95■□□□□ 0.78
PRE8P23639 YCR051WYCR051W 669 nt19.38■□□□□ 0.69
PRE8P23639 YOL085CYOL085C 342 nt18.85■□□□□ 0.61
PRE8P23639 PKP1YIL042C 1185 nt18.57■□□□□ 0.56
PRE8P23639 RPP1BYDL130W 321 nt18.38■□□□□ 0.53
PRE8P23639 DBP2YNL112W 1641 nt18.31■□□□□ 0.52
PRE8P23639 TRN1tP(UGG)A 72 nt18.23■□□□□ 0.51
PRE8P23639 SUF9tP(UGG)F 72 nt18.23■□□□□ 0.51
PRE8P23639 SUF8tP(UGG)H 72 nt18.23■□□□□ 0.51
PRE8P23639 tP(UGG)LtP(UGG)L 72 nt18.23■□□□□ 0.51
PRE8P23639 SUF7tP(UGG)M 72 nt18.23■□□□□ 0.51
PRE8P23639 tP(UGG)N1tP(UGG)N1 72 nt18.23■□□□□ 0.51
PRE8P23639 tP(UGG)N2tP(UGG)N2 72 nt18.23■□□□□ 0.51
PRE8P23639 tP(UGG)O1tP(UGG)O1 72 nt18.23■□□□□ 0.51
PRE8P23639 SUF11tP(UGG)O2 72 nt18.23■□□□□ 0.51
PRE8P23639 CCC1YLR220W 969 nt18.11■□□□□ 0.49
PRE8P23639 SCJ1YMR214W 1134 nt17.99■□□□□ 0.47
PRE8P23639 ATS1YAL020C 1002 nt17.93■□□□□ 0.46
PRE8P23639 PET122YER153C 765 nt17.54■□□□□ 0.4
PRE8P23639 YBR190WYBR190W 312 nt17.44■□□□□ 0.38
PRE8P23639 SCR1SCR1 522 nt17.43■□□□□ 0.38
PRE8P23639 tP(UGG)O3tP(UGG)O3 72 nt17.36■□□□□ 0.37
PRE8P23639 RVS167YDR388W 1449 nt17.28■□□□□ 0.36
PRE8P23639 RTC3YHR087W 336 nt17.12■□□□□ 0.33
PRE8P23639 RRN5YLR141W 1092 nt17.08■□□□□ 0.32
PRE8P23639 RSB1YOR049C 1065 nt16.81■□□□□ 0.28
PRE8P23639 YDJ1YNL064C 1230 nt16.76■□□□□ 0.27
PRE8P23639 YER088W-BYER088W-B 147 nt16.73■□□□□ 0.27
PRE8P23639 SHR5YOL110W 714 nt16.73■□□□□ 0.27
PRE8P23639 PST2YDR032C 597 nt16.55■□□□□ 0.24
PRE8P23639 GAR1YHR089C 618 nt16.39■□□□□ 0.21
PRE8P23639 DEP1YAL013W 1218 nt16.22■□□□□ 0.19
PRE8P23639 URN1YPR152C 1398 nt16.12■□□□□ 0.17
PRE8P23639 YKL097CYKL097C 411 nt16.05■□□□□ 0.16
PRE8P23639 YNL208WYNL208W 600 nt15.95■□□□□ 0.14
PRE8P23639 RPN10YHR200W 807 nt15.92■□□□□ 0.14
PRE8P23639 SHU1YHL006C 453 nt15.83■□□□□ 0.12
PRE8P23639 TIR1YER011W 765 nt15.82■□□□□ 0.12
PRE8P23639 OPI9YLR338W 858 nt15.8■□□□□ 0.12
PRE8P23639 SAH1YER043C 1350 nt15.65■□□□□ 0.1
PRE8P23639 PUT4YOR348C 1884 nt15.62■□□□□ 0.09
PRE8P23639 SSA1YAL005C 1929 nt15.57■□□□□ 0.08
PRE8P23639 YAL037C-BYAL037C-B 975 nt15.54■□□□□ 0.08
PRE8P23639 ARE1YCR048W 1833 nt15.44■□□□□ 0.06
PRE8P23639 YJR018WYJR018W 363 nt15.39■□□□□ 0.05
PRE8P23639 SRB2YHR041C 633 nt15.38■□□□□ 0.05
PRE8P23639 YOR139CYOR139C 393 nt15.36■□□□□ 0.05
PRE8P23639 PUN1YLR414C 792 nt15.34■□□□□ 0.05
PRE8P23639 YHR049C-AYHR049C-A 297 nt15.24■□□□□ 0.03
PRE8P23639 YJR120WYJR120W 351 nt15.2■□□□□ 0.02
PRE8P23639 POA1YBR022W 534 nt15.19■□□□□ 0.02
PRE8P23639 WWM1YFL010C 636 nt15.18■□□□□ 0.02
PRE8P23639 NPL3YDR432W 1245 nt15.17■□□□□ 0.02
PRE8P23639 RPP2BYDR382W 333 nt15.15■□□□□ 0.02
PRE8P23639 PTC2YER089C 1395 nt15.13■□□□□ 0.01
PRE8P23639 YGR021WYGR021W 873 nt15.13■□□□□ 0.01
PRE8P23639 MNP1YGL068W 585 nt15.11■□□□□ 0.01
PRE8P23639 HOM6YJR139C 1080 nt15.11■□□□□ 0.01
PRE8P23639 BUD23YCR047C 828 nt14.95□□□□□ -0.02
PRE8P23639 YOL037CYOL037C 354 nt14.93□□□□□ -0.02
PRE8P23639 RKM5YLR137W 1104 nt14.9□□□□□ -0.02
PRE8P23639 YFL021C-AYFL021C-A 855 nt14.89□□□□□ -0.03
PRE8P23639 BDH2YAL061W 1254 nt14.89□□□□□ -0.03
PRE8P23639 NAB2YGL122C 1578 nt14.87□□□□□ -0.03
PRE8P23639 SSA3YBL075C 1950 nt14.84□□□□□ -0.03
PRE8P23639 INM2YDR287W 879 nt14.79□□□□□ -0.04
PRE8P23639 BSC6YOL137W 1494 nt14.78□□□□□ -0.04
PRE8P23639 FPR4YLR449W 1179 nt14.76□□□□□ -0.05
PRE8P23639 tM(CAU)CtM(CAU)C 72 nt14.75□□□□□ -0.05
PRE8P23639 IMT4tM(CAU)E 72 nt14.75□□□□□ -0.05
PRE8P23639 IMT3tM(CAU)J3 72 nt14.75□□□□□ -0.05
PRE8P23639 IMT1tM(CAU)O1 72 nt14.75□□□□□ -0.05
PRE8P23639 IMT2tM(CAU)P 72 nt14.75□□□□□ -0.05
PRE8P23639 LSM3YLR438C-A 270 nt14.74□□□□□ -0.05
PRE8P23639 DAL1YIR027C 1383 nt14.73□□□□□ -0.05
PRE8P23639 YBL100CYBL100C 315 nt14.7□□□□□ -0.06
PRE8P23639 FIS1YIL065C 468 nt14.67□□□□□ -0.06
PRE8P23639 PHO4YFR034C 939 nt14.59□□□□□ -0.07
PRE8P23639 YLR281CYLR281C 468 nt14.58□□□□□ -0.08
PRE8P23639 TRM9YML014W 840 nt14.58□□□□□ -0.08
PRE8P23639 PUS2YGL063W 1113 nt14.56□□□□□ -0.08
PRE8P23639 FUN26YAL022C 1554 nt14.54□□□□□ -0.08
PRE8P23639 WHI5YOR083W 888 nt14.51□□□□□ -0.09
PRE8P23639 CCT6YDR188W 1641 nt14.38□□□□□ -0.11
PRE8P23639 YLR154C-GYLR154C-G 150 nt14.28□□□□□ -0.12
PRE8P23639 ALF1YNL148C 765 nt14.28□□□□□ -0.12
PRE8P23639 MOT3YMR070W 1473 nt14.27□□□□□ -0.12
PRE8P23639 SUF2tP(AGG)C 72 nt14.25□□□□□ -0.13
PRE8P23639 SUF10tP(AGG)N 72 nt14.25□□□□□ -0.13
PRE8P23639 DSK2YMR276W 1122 nt14.23□□□□□ -0.13
PRE8P23639 YPR011CYPR011C 981 nt14.23□□□□□ -0.13
PRE8P23639 YPS1YLR120C 1710 nt14.2□□□□□ -0.14
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms