Protein–RNA interactions for Protein: P38206

RFT1, Oligosaccharide translocation protein RFT1, yeastyeast

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFT1P38206 YML009W-BYML009W-B 477 nt22.92■■□□□ 1.26
RFT1P38206 NSR1YGR159C 1245 nt22.89■■□□□ 1.25
RFT1P38206 NOP1YDL014W 984 nt22.1■■□□□ 1.13
RFT1P38206 MDJ1YFL016C 1536 nt20.67■□□□□ 0.9
RFT1P38206 YKL036CYKL036C 393 nt20.18■□□□□ 0.82
RFT1P38206 SRX1YKL086W 384 nt19.3■□□□□ 0.68
RFT1P38206 Q0297Q0297 156 nt19.23■□□□□ 0.67
RFT1P38206 YJL027CYJL027C 417 nt19.02■□□□□ 0.64
RFT1P38206 YCR051WYCR051W 669 nt18.39■□□□□ 0.53
RFT1P38206 SCS3YGL126W 1143 nt18.24■□□□□ 0.51
RFT1P38206 DBP2YNL112W 1641 nt18.11■□□□□ 0.49
RFT1P38206 TRN1tP(UGG)A 72 nt17.6■□□□□ 0.41
RFT1P38206 SUF9tP(UGG)F 72 nt17.6■□□□□ 0.41
RFT1P38206 SUF8tP(UGG)H 72 nt17.6■□□□□ 0.41
RFT1P38206 tP(UGG)LtP(UGG)L 72 nt17.6■□□□□ 0.41
RFT1P38206 SUF7tP(UGG)M 72 nt17.6■□□□□ 0.41
RFT1P38206 tP(UGG)N1tP(UGG)N1 72 nt17.6■□□□□ 0.41
RFT1P38206 tP(UGG)N2tP(UGG)N2 72 nt17.6■□□□□ 0.41
RFT1P38206 tP(UGG)O1tP(UGG)O1 72 nt17.6■□□□□ 0.41
RFT1P38206 SUF11tP(UGG)O2 72 nt17.6■□□□□ 0.41
RFT1P38206 YBR190WYBR190W 312 nt17.59■□□□□ 0.41
RFT1P38206 CCC1YLR220W 969 nt17.55■□□□□ 0.4
RFT1P38206 YOL085CYOL085C 342 nt17.49■□□□□ 0.39
RFT1P38206 PKP1YIL042C 1185 nt17.36■□□□□ 0.37
RFT1P38206 RTC3YHR087W 336 nt17.3■□□□□ 0.36
RFT1P38206 RPP1BYDL130W 321 nt17.29■□□□□ 0.36
RFT1P38206 RVS167YDR388W 1449 nt16.98■□□□□ 0.31
RFT1P38206 SCJ1YMR214W 1134 nt16.88■□□□□ 0.29
RFT1P38206 PET122YER153C 765 nt16.6■□□□□ 0.25
RFT1P38206 tP(UGG)O3tP(UGG)O3 72 nt16.6■□□□□ 0.25
RFT1P38206 SCR1SCR1 522 nt16.32■□□□□ 0.2
RFT1P38206 SHR5YOL110W 714 nt16.32■□□□□ 0.2
RFT1P38206 ATS1YAL020C 1002 nt16.23■□□□□ 0.19
RFT1P38206 PUT4YOR348C 1884 nt16.16■□□□□ 0.18
RFT1P38206 RRN5YLR141W 1092 nt16.09■□□□□ 0.17
RFT1P38206 URN1YPR152C 1398 nt16.07■□□□□ 0.16
RFT1P38206 DEP1YAL013W 1218 nt16.06■□□□□ 0.16
RFT1P38206 YDJ1YNL064C 1230 nt16■□□□□ 0.15
RFT1P38206 SAH1YER043C 1350 nt15.87■□□□□ 0.13
RFT1P38206 OPI9YLR338W 858 nt15.83■□□□□ 0.12
RFT1P38206 ARE1YCR048W 1833 nt15.82■□□□□ 0.12
RFT1P38206 GAR1YHR089C 618 nt15.79■□□□□ 0.12
RFT1P38206 YER088W-BYER088W-B 147 nt15.75■□□□□ 0.11
RFT1P38206 POA1YBR022W 534 nt15.73■□□□□ 0.11
RFT1P38206 RPN10YHR200W 807 nt15.72■□□□□ 0.11
RFT1P38206 RSB1YOR049C 1065 nt15.71■□□□□ 0.11
RFT1P38206 YHR049C-AYHR049C-A 297 nt15.67■□□□□ 0.1
RFT1P38206 YNL208WYNL208W 600 nt15.67■□□□□ 0.1
RFT1P38206 SSA3YBL075C 1950 nt15.63■□□□□ 0.09
RFT1P38206 BSC6YOL137W 1494 nt15.4■□□□□ 0.06
RFT1P38206 PUN1YLR414C 792 nt15.37■□□□□ 0.05
RFT1P38206 BUD23YCR047C 828 nt15.34■□□□□ 0.05
RFT1P38206 YJR018WYJR018W 363 nt15.3■□□□□ 0.04
RFT1P38206 PTC2YER089C 1395 nt15.28■□□□□ 0.04
RFT1P38206 TIR1YER011W 765 nt15.23■□□□□ 0.03
RFT1P38206 SSA1YAL005C 1929 nt15.11■□□□□ 0.01
RFT1P38206 NAB2YGL122C 1578 nt15.07■□□□□ 0
RFT1P38206 PST2YDR032C 597 nt15.05■□□□□ -0
RFT1P38206 YJR120WYJR120W 351 nt15□□□□□ -0.01
RFT1P38206 RPP2BYDR382W 333 nt14.92□□□□□ -0.02
RFT1P38206 FPR4YLR449W 1179 nt14.91□□□□□ -0.02
RFT1P38206 SRB2YHR041C 633 nt14.84□□□□□ -0.03
RFT1P38206 FIS1YIL065C 468 nt14.83□□□□□ -0.04
RFT1P38206 DAL1YIR027C 1383 nt14.83□□□□□ -0.04
RFT1P38206 INM2YDR287W 879 nt14.74□□□□□ -0.05
RFT1P38206 PHO4YFR034C 939 nt14.71□□□□□ -0.05
RFT1P38206 SPT5YML010W 3192 nt14.7□□□□□ -0.06
RFT1P38206 YBL100CYBL100C 315 nt14.61□□□□□ -0.07
RFT1P38206 WWM1YFL010C 636 nt14.56□□□□□ -0.08
RFT1P38206 SHU1YHL006C 453 nt14.55□□□□□ -0.08
RFT1P38206 BDH2YAL061W 1254 nt14.55□□□□□ -0.08
RFT1P38206 YAL037C-BYAL037C-B 975 nt14.49□□□□□ -0.09
RFT1P38206 YPS1YLR120C 1710 nt14.47□□□□□ -0.09
RFT1P38206 MEP2YNL142W 1500 nt14.44□□□□□ -0.1
RFT1P38206 FUN26YAL022C 1554 nt14.42□□□□□ -0.1
RFT1P38206 YHR165W-AYHR165W-A 312 nt14.41□□□□□ -0.1
RFT1P38206 SSA4YER103W 1929 nt14.38□□□□□ -0.11
RFT1P38206 YKL097CYKL097C 411 nt14.36□□□□□ -0.11
RFT1P38206 TRM9YML014W 840 nt14.35□□□□□ -0.11
RFT1P38206 YDR095CYDR095C 411 nt14.34□□□□□ -0.11
RFT1P38206 YGR021WYGR021W 873 nt14.31□□□□□ -0.12
RFT1P38206 ALF1YNL148C 765 nt14.3□□□□□ -0.12
RFT1P38206 LSM3YLR438C-A 270 nt14.28□□□□□ -0.12
RFT1P38206 DCW1YKL046C 1350 nt14.27□□□□□ -0.12
RFT1P38206 HOM6YJR139C 1080 nt14.27□□□□□ -0.13
RFT1P38206 YFL021C-AYFL021C-A 855 nt14.25□□□□□ -0.13
RFT1P38206 MNP1YGL068W 585 nt14.24□□□□□ -0.13
RFT1P38206 CCT6YDR188W 1641 nt14.16□□□□□ -0.14
RFT1P38206 RPP2AYOL039W 321 nt14.1□□□□□ -0.15
RFT1P38206 SUF2tP(AGG)C 72 nt14.08□□□□□ -0.16
RFT1P38206 SUF10tP(AGG)N 72 nt14.08□□□□□ -0.16
RFT1P38206 RKM5YLR137W 1104 nt14.08□□□□□ -0.16
RFT1P38206 EMI2YDR516C 1503 nt14.06□□□□□ -0.16
RFT1P38206 PTP1YDL230W 1008 nt14.05□□□□□ -0.16
RFT1P38206 CAC2YML102W 1407 nt14.02□□□□□ -0.16
RFT1P38206 SIS1YNL007C 1059 nt14.01□□□□□ -0.17
RFT1P38206 YMR090WYMR090W 684 nt13.96□□□□□ -0.17
RFT1P38206 YDL221WYDL221W 552 nt13.92□□□□□ -0.18
RFT1P38206 ART5YGR068C 1761 nt13.88□□□□□ -0.19
RFT1P38206 YBR220CYBR220C 1683 nt13.83□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms