Protein–RNA interactions for Protein: P29465

CHS3, Chitin synthase 3, yeastyeast

Predictions only

Length 1,165 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHS3P29465 YML009W-BYML009W-B 477 nt23.71■■□□□ 1.39
CHS3P29465 NSR1YGR159C 1245 nt23.3■■□□□ 1.32
CHS3P29465 NOP1YDL014W 984 nt23.07■■□□□ 1.28
CHS3P29465 YKL036CYKL036C 393 nt21.57■■□□□ 1.04
CHS3P29465 MDJ1YFL016C 1536 nt20.54■□□□□ 0.88
CHS3P29465 Q0297Q0297 156 nt20.32■□□□□ 0.84
CHS3P29465 SRX1YKL086W 384 nt20.2■□□□□ 0.82
CHS3P29465 YJL027CYJL027C 417 nt20.19■□□□□ 0.82
CHS3P29465 SCS3YGL126W 1143 nt19.8■□□□□ 0.76
CHS3P29465 YCR051WYCR051W 669 nt19.21■□□□□ 0.67
CHS3P29465 YOL085CYOL085C 342 nt18.71■□□□□ 0.59
CHS3P29465 PKP1YIL042C 1185 nt18.44■□□□□ 0.54
CHS3P29465 DBP2YNL112W 1641 nt18.29■□□□□ 0.52
CHS3P29465 RPP1BYDL130W 321 nt18.24■□□□□ 0.51
CHS3P29465 TRN1tP(UGG)A 72 nt18.15■□□□□ 0.5
CHS3P29465 SUF9tP(UGG)F 72 nt18.15■□□□□ 0.5
CHS3P29465 SUF8tP(UGG)H 72 nt18.15■□□□□ 0.5
CHS3P29465 tP(UGG)LtP(UGG)L 72 nt18.15■□□□□ 0.5
CHS3P29465 SUF7tP(UGG)M 72 nt18.15■□□□□ 0.5
CHS3P29465 tP(UGG)N1tP(UGG)N1 72 nt18.15■□□□□ 0.5
CHS3P29465 tP(UGG)N2tP(UGG)N2 72 nt18.15■□□□□ 0.5
CHS3P29465 tP(UGG)O1tP(UGG)O1 72 nt18.15■□□□□ 0.5
CHS3P29465 SUF11tP(UGG)O2 72 nt18.15■□□□□ 0.5
CHS3P29465 CCC1YLR220W 969 nt17.99■□□□□ 0.47
CHS3P29465 ATS1YAL020C 1002 nt17.77■□□□□ 0.44
CHS3P29465 SCJ1YMR214W 1134 nt17.76■□□□□ 0.43
CHS3P29465 PET122YER153C 765 nt17.44■□□□□ 0.38
CHS3P29465 YBR190WYBR190W 312 nt17.37■□□□□ 0.37
CHS3P29465 tP(UGG)O3tP(UGG)O3 72 nt17.25■□□□□ 0.35
CHS3P29465 SCR1SCR1 522 nt17.23■□□□□ 0.35
CHS3P29465 RVS167YDR388W 1449 nt17.13■□□□□ 0.33
CHS3P29465 RTC3YHR087W 336 nt17.02■□□□□ 0.32
CHS3P29465 RRN5YLR141W 1092 nt16.95■□□□□ 0.3
CHS3P29465 RSB1YOR049C 1065 nt16.66■□□□□ 0.26
CHS3P29465 YDJ1YNL064C 1230 nt16.64■□□□□ 0.25
CHS3P29465 SHR5YOL110W 714 nt16.64■□□□□ 0.25
CHS3P29465 YER088W-BYER088W-B 147 nt16.62■□□□□ 0.25
CHS3P29465 PST2YDR032C 597 nt16.42■□□□□ 0.22
CHS3P29465 GAR1YHR089C 618 nt16.28■□□□□ 0.2
CHS3P29465 DEP1YAL013W 1218 nt16.15■□□□□ 0.18
CHS3P29465 URN1YPR152C 1398 nt16.04■□□□□ 0.16
CHS3P29465 YKL097CYKL097C 411 nt15.87■□□□□ 0.13
CHS3P29465 YNL208WYNL208W 600 nt15.85■□□□□ 0.13
CHS3P29465 RPN10YHR200W 807 nt15.78■□□□□ 0.12
CHS3P29465 OPI9YLR338W 858 nt15.74■□□□□ 0.11
CHS3P29465 SHU1YHL006C 453 nt15.72■□□□□ 0.11
CHS3P29465 TIR1YER011W 765 nt15.71■□□□□ 0.11
CHS3P29465 PUT4YOR348C 1884 nt15.64■□□□□ 0.09
CHS3P29465 SAH1YER043C 1350 nt15.62■□□□□ 0.09
CHS3P29465 SSA1YAL005C 1929 nt15.52■□□□□ 0.07
CHS3P29465 ARE1YCR048W 1833 nt15.45■□□□□ 0.06
CHS3P29465 YAL037C-BYAL037C-B 975 nt15.43■□□□□ 0.06
CHS3P29465 SRB2YHR041C 633 nt15.39■□□□□ 0.05
CHS3P29465 YJR018WYJR018W 363 nt15.3■□□□□ 0.04
CHS3P29465 YOR139CYOR139C 393 nt15.26■□□□□ 0.03
CHS3P29465 PUN1YLR414C 792 nt15.25■□□□□ 0.03
CHS3P29465 YHR049C-AYHR049C-A 297 nt15.23■□□□□ 0.03
CHS3P29465 YJR120WYJR120W 351 nt15.21■□□□□ 0.03
CHS3P29465 POA1YBR022W 534 nt15.18■□□□□ 0.02
CHS3P29465 WWM1YFL010C 636 nt15.1■□□□□ 0.01
CHS3P29465 PTC2YER089C 1395 nt15.08■□□□□ 0
CHS3P29465 MNP1YGL068W 585 nt15.04■□□□□ -0
CHS3P29465 HOM6YJR139C 1080 nt15.03■□□□□ -0
CHS3P29465 RPP2BYDR382W 333 nt15.01□□□□□ -0.01
CHS3P29465 NPL3YDR432W 1245 nt15□□□□□ -0.01
CHS3P29465 YGR021WYGR021W 873 nt15□□□□□ -0.01
CHS3P29465 SSA3YBL075C 1950 nt14.89□□□□□ -0.03
CHS3P29465 BUD23YCR047C 828 nt14.89□□□□□ -0.03
CHS3P29465 NAB2YGL122C 1578 nt14.81□□□□□ -0.04
CHS3P29465 BDH2YAL061W 1254 nt14.8□□□□□ -0.04
CHS3P29465 RKM5YLR137W 1104 nt14.8□□□□□ -0.04
CHS3P29465 YOL037CYOL037C 354 nt14.79□□□□□ -0.04
CHS3P29465 BSC6YOL137W 1494 nt14.79□□□□□ -0.04
CHS3P29465 YFL021C-AYFL021C-A 855 nt14.78□□□□□ -0.04
CHS3P29465 FIS1YIL065C 468 nt14.69□□□□□ -0.06
CHS3P29465 INM2YDR287W 879 nt14.68□□□□□ -0.06
CHS3P29465 DAL1YIR027C 1383 nt14.68□□□□□ -0.06
CHS3P29465 FPR4YLR449W 1179 nt14.67□□□□□ -0.06
CHS3P29465 LSM3YLR438C-A 270 nt14.63□□□□□ -0.07
CHS3P29465 YBL100CYBL100C 315 nt14.63□□□□□ -0.07
CHS3P29465 tM(CAU)CtM(CAU)C 72 nt14.62□□□□□ -0.07
CHS3P29465 IMT4tM(CAU)E 72 nt14.62□□□□□ -0.07
CHS3P29465 IMT3tM(CAU)J3 72 nt14.62□□□□□ -0.07
CHS3P29465 IMT1tM(CAU)O1 72 nt14.62□□□□□ -0.07
CHS3P29465 IMT2tM(CAU)P 72 nt14.62□□□□□ -0.07
CHS3P29465 PHO4YFR034C 939 nt14.56□□□□□ -0.08
CHS3P29465 YLR281CYLR281C 468 nt14.48□□□□□ -0.09
CHS3P29465 FUN26YAL022C 1554 nt14.47□□□□□ -0.09
CHS3P29465 TRM9YML014W 840 nt14.46□□□□□ -0.09
CHS3P29465 PUS2YGL063W 1113 nt14.42□□□□□ -0.1
CHS3P29465 WHI5YOR083W 888 nt14.39□□□□□ -0.11
CHS3P29465 CCT6YDR188W 1641 nt14.32□□□□□ -0.12
CHS3P29465 YPR011CYPR011C 981 nt14.19□□□□□ -0.14
CHS3P29465 YPS1YLR120C 1710 nt14.18□□□□□ -0.14
CHS3P29465 YLR154C-GYLR154C-G 150 nt14.18□□□□□ -0.14
CHS3P29465 ALF1YNL148C 765 nt14.16□□□□□ -0.14
CHS3P29465 MOT3YMR070W 1473 nt14.14□□□□□ -0.15
CHS3P29465 YDR095CYDR095C 411 nt14.13□□□□□ -0.15
CHS3P29465 YLR236CYLR236C 324 nt14.13□□□□□ -0.15
CHS3P29465 SUF2tP(AGG)C 72 nt14.12□□□□□ -0.15
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms