Protein–RNA interactions for Protein: P53207

SNU71, U1 small nuclear ribonucleoprotein component SNU71, yeastyeast

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNU71P53207 YML009W-BYML009W-B 477 nt23.9■■□□□ 1.42
SNU71P53207 NOP1YDL014W 984 nt23.41■■□□□ 1.34
SNU71P53207 NSR1YGR159C 1245 nt23.39■■□□□ 1.33
SNU71P53207 YKL036CYKL036C 393 nt21.9■■□□□ 1.1
SNU71P53207 Q0297Q0297 156 nt20.53■□□□□ 0.88
SNU71P53207 YJL027CYJL027C 417 nt20.53■□□□□ 0.88
SNU71P53207 MDJ1YFL016C 1536 nt20.42■□□□□ 0.86
SNU71P53207 SRX1YKL086W 384 nt20.39■□□□□ 0.85
SNU71P53207 SCS3YGL126W 1143 nt20.08■□□□□ 0.81
SNU71P53207 YCR051WYCR051W 669 nt19.42■□□□□ 0.7
SNU71P53207 YOL085CYOL085C 342 nt18.91■□□□□ 0.62
SNU71P53207 PKP1YIL042C 1185 nt18.6■□□□□ 0.57
SNU71P53207 RPP1BYDL130W 321 nt18.45■□□□□ 0.54
SNU71P53207 SCJ1YMR214W 1134 nt18.26■□□□□ 0.51
SNU71P53207 TRN1tP(UGG)A 72 nt18.21■□□□□ 0.51
SNU71P53207 SUF9tP(UGG)F 72 nt18.21■□□□□ 0.51
SNU71P53207 SUF8tP(UGG)H 72 nt18.21■□□□□ 0.51
SNU71P53207 tP(UGG)LtP(UGG)L 72 nt18.21■□□□□ 0.51
SNU71P53207 SUF7tP(UGG)M 72 nt18.21■□□□□ 0.51
SNU71P53207 tP(UGG)N1tP(UGG)N1 72 nt18.21■□□□□ 0.51
SNU71P53207 tP(UGG)N2tP(UGG)N2 72 nt18.21■□□□□ 0.51
SNU71P53207 tP(UGG)O1tP(UGG)O1 72 nt18.21■□□□□ 0.51
SNU71P53207 SUF11tP(UGG)O2 72 nt18.21■□□□□ 0.51
SNU71P53207 DBP2YNL112W 1641 nt18.14■□□□□ 0.49
SNU71P53207 CCC1YLR220W 969 nt18.08■□□□□ 0.48
SNU71P53207 ATS1YAL020C 1002 nt18.06■□□□□ 0.48
SNU71P53207 PET122YER153C 765 nt17.57■□□□□ 0.4
SNU71P53207 SCR1SCR1 522 nt17.56■□□□□ 0.4
SNU71P53207 tP(UGG)O3tP(UGG)O3 72 nt17.35■□□□□ 0.37
SNU71P53207 YBR190WYBR190W 312 nt17.32■□□□□ 0.36
SNU71P53207 RVS167YDR388W 1449 nt17.3■□□□□ 0.36
SNU71P53207 RRN5YLR141W 1092 nt17.08■□□□□ 0.32
SNU71P53207 RTC3YHR087W 336 nt17.03■□□□□ 0.32
SNU71P53207 Q0182Q0182 405 nt17.01■□□□□ 0.31
SNU71P53207 RSB1YOR049C 1065 nt16.9■□□□□ 0.3
SNU71P53207 YDJ1YNL064C 1230 nt16.79■□□□□ 0.28
SNU71P53207 YER088W-BYER088W-B 147 nt16.76■□□□□ 0.27
SNU71P53207 SHR5YOL110W 714 nt16.73■□□□□ 0.27
SNU71P53207 PST2YDR032C 597 nt16.63■□□□□ 0.25
SNU71P53207 GAR1YHR089C 618 nt16.37■□□□□ 0.21
SNU71P53207 MOT3YMR070W 1473 nt16.36■□□□□ 0.21
SNU71P53207 YKL097CYKL097C 411 nt16.24■□□□□ 0.19
SNU71P53207 DEP1YAL013W 1218 nt16.12■□□□□ 0.17
SNU71P53207 URN1YPR152C 1398 nt16.02■□□□□ 0.16
SNU71P53207 RPN10YHR200W 807 nt15.95■□□□□ 0.14
SNU71P53207 YNL208WYNL208W 600 nt15.93■□□□□ 0.14
SNU71P53207 SHU1YHL006C 453 nt15.88■□□□□ 0.13
SNU71P53207 TIR1YER011W 765 nt15.8■□□□□ 0.12
SNU71P53207 SSA3YBL075C 1950 nt15.77■□□□□ 0.12
SNU71P53207 OPI9YLR338W 858 nt15.7■□□□□ 0.1
SNU71P53207 YAL037C-BYAL037C-B 975 nt15.53■□□□□ 0.08
SNU71P53207 SAH1YER043C 1350 nt15.49■□□□□ 0.07
SNU71P53207 SSA1YAL005C 1929 nt15.49■□□□□ 0.07
SNU71P53207 YOR139CYOR139C 393 nt15.43■□□□□ 0.06
SNU71P53207 PUT4YOR348C 1884 nt15.39■□□□□ 0.05
SNU71P53207 NPL3YDR432W 1245 nt15.34■□□□□ 0.05
SNU71P53207 YJR018WYJR018W 363 nt15.31■□□□□ 0.04
SNU71P53207 PUN1YLR414C 792 nt15.29■□□□□ 0.04
SNU71P53207 YGR021WYGR021W 873 nt15.25■□□□□ 0.03
SNU71P53207 ARE1YCR048W 1833 nt15.23■□□□□ 0.03
SNU71P53207 SRB2YHR041C 633 nt15.23■□□□□ 0.03
SNU71P53207 RPP2BYDR382W 333 nt15.17■□□□□ 0.02
SNU71P53207 WWM1YFL010C 636 nt15.14■□□□□ 0.01
SNU71P53207 HOM6YJR139C 1080 nt15.14■□□□□ 0.01
SNU71P53207 MNP1YGL068W 585 nt15.13■□□□□ 0.01
SNU71P53207 YHR049C-AYHR049C-A 297 nt15.09■□□□□ 0.01
SNU71P53207 YOL037CYOL037C 354 nt15.07■□□□□ 0
SNU71P53207 YJR120WYJR120W 351 nt15.05■□□□□ -0
SNU71P53207 PTC2YER089C 1395 nt15□□□□□ -0.01
SNU71P53207 POA1YBR022W 534 nt14.98□□□□□ -0.01
SNU71P53207 RKM5YLR137W 1104 nt14.94□□□□□ -0.02
SNU71P53207 YFL021C-AYFL021C-A 855 nt14.93□□□□□ -0.02
SNU71P53207 BDH2YAL061W 1254 nt14.86□□□□□ -0.03
SNU71P53207 tM(CAU)CtM(CAU)C 72 nt14.82□□□□□ -0.04
SNU71P53207 IMT4tM(CAU)E 72 nt14.82□□□□□ -0.04
SNU71P53207 IMT3tM(CAU)J3 72 nt14.82□□□□□ -0.04
SNU71P53207 IMT1tM(CAU)O1 72 nt14.82□□□□□ -0.04
SNU71P53207 IMT2tM(CAU)P 72 nt14.82□□□□□ -0.04
SNU71P53207 BUD23YCR047C 828 nt14.81□□□□□ -0.04
SNU71P53207 NAB2YGL122C 1578 nt14.77□□□□□ -0.04
SNU71P53207 LSM3YLR438C-A 270 nt14.74□□□□□ -0.05
SNU71P53207 INM2YDR287W 879 nt14.73□□□□□ -0.05
SNU71P53207 FPS1YLL043W 2010 nt14.68□□□□□ -0.06
SNU71P53207 FPR4YLR449W 1179 nt14.67□□□□□ -0.06
SNU71P53207 DAL1YIR027C 1383 nt14.66□□□□□ -0.06
SNU71P53207 YBL100CYBL100C 315 nt14.66□□□□□ -0.06
SNU71P53207 PUS2YGL063W 1113 nt14.64□□□□□ -0.07
SNU71P53207 YLR281CYLR281C 468 nt14.63□□□□□ -0.07
SNU71P53207 BSC6YOL137W 1494 nt14.58□□□□□ -0.08
SNU71P53207 FIS1YIL065C 468 nt14.57□□□□□ -0.08
SNU71P53207 TRM9YML014W 840 nt14.54□□□□□ -0.08
SNU71P53207 WHI5YOR083W 888 nt14.54□□□□□ -0.08
SNU71P53207 PHO4YFR034C 939 nt14.51□□□□□ -0.09
SNU71P53207 FUN26YAL022C 1554 nt14.48□□□□□ -0.09
SNU71P53207 CCT6YDR188W 1641 nt14.34□□□□□ -0.11
SNU71P53207 DSK2YMR276W 1122 nt14.31□□□□□ -0.12
SNU71P53207 FMP45YDL222C 930 nt14.29□□□□□ -0.12
SNU71P53207 IMP2'YIL154C 1041 nt14.28□□□□□ -0.12
SNU71P53207 YLR154C-GYLR154C-G 150 nt14.28□□□□□ -0.12
SNU71P53207 SUF2tP(AGG)C 72 nt14.27□□□□□ -0.13
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms